MEAF6

General Information

Gene Name : MEAF6
Gene ID : ENSG00000163875.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MEAF6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MEAF6	ENSG00000163875.15	56.46	49.13	52.80	ENCSR000AEF
HepG2	MEAF6	ENSG00000163875.15	29.94	52.22	41.08	ENCSR985KAT
K562	MEAF6	ENSG00000163875.15	85.35	101.65	93.50	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MEAF6 is not avaliable on ENCORE database.

Proteins bound to RNA

MEAF6 RNA is bound by 19 proteins.

CanvasJS.com

eCLIP assay for MEAF6 is not avaliable on ENCORE database.

19 proteins are bound to MEAF6 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	37959262	37959331	-	3'-UTR,intron-Distal,intron-Proximal	5.33948	75.56685	K562	PUM2
chr1	37959125	37959211	-	3'-UTR,intron-Distal	6.55709	28.09327	K562	TIA1
chr1	37980328	37980374	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.03216	27.01324	K562	YBX3
chr1	37980313	37980328	-	CDS,intron-Distal,intron-Proximal	4.40174	20.87348	K562	YBX3
chr1	37959331	37959439	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.41671	17.89722	K562	PUM2
chr1	37967358	37967420	-	CDS,intron-Distal,intron-Proximal	4.83429	13.44390	HepG2	PRPF8
chr1	37959101	37959201	-	3'-UTR,intron-Distal	3.72689	12.09736	K562	IGF2BP1
chr1	37961703	37961771	-	intron-Distal	5.17374	11.05731	K562	KHSRP
chr1	37959211	37959223	-	3'-UTR,intron-Distal	4.46520	10.32245	K562	TIA1
chr1	37961778	37961875	-	intron-Distal	5.29630	8.71243	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 36 entries

eCLIP assay for MEAF6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MEAF6 is not available on ENCORE database.
75 RBPs can affect the levels of MEAF6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MEAF6 is not available on ENCORE database.

75 RBPs can affect the gene expression of MEAF6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MEAF6	ENSG00000163875.11	1652.05650	877.51390	0.91270	27.69120	26.41920	HepG2	ZNF622
MEAF6	ENSG00000163875.11	1326.93630	736.50400	0.84920	22.98280	21.38480	HepG2	ZC3H8
MEAF6	ENSG00000163875.11	4265.61400	2298.28360	0.89210	17.78080	16.44150	K562	PUS1
MEAF6	ENSG00000163875.11	1207.18860	726.17330	0.73320	16.08560	14.87810	HepG2	ACO1
MEAF6	ENSG00000163875.11	1693.51630	1012.99000	0.74130	15.75910	14.72850	HepG2	RBM22
MEAF6	ENSG00000163875.11	1228.22990	729.58650	0.75130	15.49210	13.88430	HepG2	AKAP8L
MEAF6	ENSG00000163875.11	1946.74350	958.12930	1.02270	13.54090	12.45610	HepG2	AKAP1
MEAF6	ENSG00000163875.11	1225.93510	770.32180	0.67020	12.84170	11.69280	HepG2	UTP3
MEAF6	ENSG00000163875.11	418.93110	845.06750	-1.01240	12.80700	11.58070	HepG2	HNRNPU
MEAF6	ENSG00000163875.11	1168.50200	1834.43990	-0.65070	12.58390	10.71680	K562	HNRNPU
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 82 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MEAF6 is not available on ENCORE database.

12 RBPs can affect the splicing of MEAF6 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MEAF6	ENSG00000163875.11	chr1	-	37962147	37962205			37961474	37961519	37967404	37967597	0.24600	0.00000	0.00003	included	K562	SRSF1
SE	MEAF6	ENSG00000163875.11	chr1	-	37962147	37962205			37961474	37961519	37967404	37967588	-0.11200	0.00000	0.00001	excluded	K562	HNRNPL
A3SS	MEAF6	ENSG00000163875.11	chr1	-	37959525	37959764			37959525	37959708	37961485	37961613	0.06500	0.00000	0.00000	longer	K562	AQR
SE	MEAF6	ENSG00000163875.11	chr1	-	37961485	37961519			37959362	37959415	37967404	37967597	-0.13100	0.00005	0.00153	excluded	K562	HNRNPC
MXE	MEAF6	ENSG00000163875.11	chr1	-	37967404	37967597	37974878	37974924	37962147	37962205	37975055	37975143	-0.08800	0.00007	0.00226	2included	K562	SRSF1
SE	MEAF6	ENSG00000163875.11	chr1	-	37961485	37961519			37959362	37959415	37967404	37967597	-0.12100	0.00022	0.02718	excluded	HepG2	SUPV3L1
SE	MEAF6	ENSG00000163875.11	chr1	-	37959525	37959708			37959362	37959415	37967404	37967597	0.36600	0.00048	0.01143	included	K562	SF3B4
SE	MEAF6	ENSG00000163875.11	chr1	-	37959525	37959708			37959362	37959415	37967404	37967597	0.32000	0.00088	0.02482	included	K562	RBM15
SE	MEAF6	ENSG00000163875.11	chr1	-	37959525	37959708			37959362	37959415	37967404	37967597	0.28600	0.00118	0.01955	included	K562	PUS1
SE	MEAF6	ENSG00000163875.11	chr1	-	37962147	37962205			37961474	37961519	37967404	37967597	0.15100	0.00125	0.04756	included	K562	PTBP1

Showing 1 to 10 of 17 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MEAF6

General Information

Functions

Localization

Domains (AlphaFold: MEAF6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MEAF6 is not avaliable on ENCORE database.

19 proteins are bound to MEAF6 RNA:

eCLIP assay for MEAF6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MEAF6 is not available on ENCORE database.

75 RBPs can affect the gene expression of MEAF6 :

The Knockdown/knockout RNA-Seq assay for MEAF6 is not available on ENCORE database.

12 RBPs can affect the splicing of MEAF6 :

The Knockdown/knockout RNA-Seq assay for MEAF6 is not avaliable on ENCORE database.