LCP2

General Information

Gene Name       : LCP2
Gene ID             : ENSG00000043462.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LCP2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LCP2ENSG00000043462.1130.7334.3932.56ENCSR000AEF
HepG2LCP2ENSG00000043462.110.000.000.00ENCSR985KAT
K562LCP2ENSG00000043462.1117.0521.0519.05ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LCP2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LCP2 RNA is bound by 6 proteins.  







eCLIP assay for LCP2 is not avaliable on ENCORE database.





6 proteins are bound to LCP2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5169688061169688113-CDS,intron-Distal,intron-Proximal4.0663111.58353K562AQR
chr5169702249169702375-CDS,intron-Distal,intron-Proximal5.284597.23718K562AQR
chr5169689588169689640-CDS,intron-Distal,intron-Proximal3.888894.89208K562AQR
chr5169697846169697923-CDS,intron-Distal,intron-Proximal4.255564.21675K562ZNF622
chr5169720280169720360-CDS,intron-Distal,intron-Proximal3.238343.18246K562PRPF8
chr5169701258169701368-CDS,intron-Distal,intron-Proximal4.964545.17615K562AQR
chr5169683067169683284-intron-Distal4.078606.07385K562GTF2F1
chr5169683091169683256-intron-Distal4.7077922.94298K562AGGF1
chr5169689443169689512-intron-Distal4.010923.31283K562PRPF8
chr5169683101169683224-intron-Distal4.207037.11489K562HNRNPL
chr5169688026169688061-intron-Distal,intron-Proximal4.118605.47926K562AQR
chr5169688004169688089-intron-Distal,intron-Proximal3.428163.47285K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LCP2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LCP2 is not available on ENCORE database.

  • 77 RBPs can affect the levels of LCP2.  








The Knockdown/knockout RNA-Seq assay for LCP2 is not available on ENCORE database.





77 RBPs can affect the gene expression of LCP2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LCP2ENSG00000043462.7790.88740418.926100.9167011.551009.18010K562AARS
LCP2ENSG00000043462.7977.88820582.267800.747908.398506.29450K562ABCF1
LCP2ENSG00000043462.7248.45020397.68700-0.678705.499104.74250K562AGGF1
LCP2ENSG00000043462.7304.89920436.98010-0.519203.407502.29200K562AKAP8
LCP2ENSG00000043462.7269.50590413.80700-0.618604.228303.41750K562AKAP8L
LCP2ENSG00000043462.7268.47400521.19880-0.957108.817906.52120K562APOBEC3C
LCP2ENSG00000043462.7116.66370364.82430-1.6448015.2621014.03640K562AQR
LCP2ENSG00000043462.7677.71560405.597600.740506.353704.13980K562BUD13
LCP2ENSG00000043462.7512.04300257.456400.991806.579404.77780K562CCAR1
LCP2ENSG00000043462.7245.36170406.80080-0.729405.558403.76380K562CIRBP
LCP2ENSG00000043462.71426.02340645.091701.1443031.5919028.33340K562CPEB4
LCP2ENSG00000043462.7312.66460451.20710-0.529203.685502.28780K562DDX21
LCP2ENSG00000043462.7294.45790667.51950-1.1807022.0404020.37340K562DDX47
LCP2ENSG00000043462.7723.84070387.211900.902406.190403.15600K562DDX55
LCP2ENSG00000043462.7567.73240445.313500.350302.434401.62040K562DKC1
LCP2ENSG00000043462.794.88440291.18560-1.6177013.2673010.72560K562EEF2
LCP2ENSG00000043462.72134.15420295.849802.85060162.25820159.18540K562EIF2S2
LCP2ENSG00000043462.7108.76600261.85790-1.267602.718401.72430K562EIF3A
LCP2ENSG00000043462.7132.87930301.15390-1.180408.629506.64030K562EIF3D
LCP2ENSG00000043462.7111.63120239.60480-1.101908.312506.93940K562EIF3G
LCP2ENSG00000043462.7168.47940325.44150-0.949807.585306.22910K562EIF4A3
LCP2ENSG00000043462.7465.72660590.69060-0.342902.706401.77630K562EIF4G2
LCP2ENSG00000043462.7256.47430418.58570-0.706705.150203.96950K562FIP1L1
LCP2ENSG00000043462.7800.32680398.038801.007607.737305.71020K562FKBP4
LCP2ENSG00000043462.71562.49240686.276301.1869022.3373019.82320K562FMR1
LCP2ENSG00000043462.7198.48610338.44540-0.769906.108405.26190K562FXR1
LCP2ENSG00000043462.7191.41120394.16550-1.042104.581203.60970K562GRSF1
LCP2ENSG00000043462.7187.83560399.71600-1.0895011.443609.47310K562HNRNPA1
LCP2ENSG00000043462.71136.07780716.601900.664703.895702.00790K562HNRNPAB
LCP2ENSG00000043462.7214.70500458.28080-1.0939011.3474010.20840K562HNRNPC
LCP2ENSG00000043462.7459.02380603.25390-0.394202.670901.63640K562HNRNPL
LCP2ENSG00000043462.7168.47830344.30990-1.031107.270905.64900K562HNRNPM
LCP2ENSG00000043462.7271.15660442.67070-0.707106.621305.23080K562HNRNPU
LCP2ENSG00000043462.71305.90350567.489101.2023021.7770019.72940K562HSPD1
LCP2ENSG00000043462.7225.36360398.90930-0.823807.087505.71670K562MAGOH
LCP2ENSG00000043462.7137.97690398.07850-1.5286020.1830017.63720K562MATR3
LCP2ENSG00000043462.7841.66040491.977000.7745010.107608.16290K562MBNL1
LCP2ENSG00000043462.7229.59850502.11510-1.1289015.8562014.13010K562MTPAP
LCP2ENSG00000043462.7468.52320324.974200.527703.822402.35920K562NCBP2
LCP2ENSG00000043462.7449.00220557.94750-0.313402.463601.75450K562NSUN2
LCP2ENSG00000043462.7222.54860364.44300-0.711602.352001.45380K562PABPN1
LCP2ENSG00000043462.7558.79200389.999600.518704.253502.55420K562PCBP1
LCP2ENSG00000043462.7126.33700562.57640-2.1548031.0703028.53990K562PCBP3
LCP2ENSG00000043462.7627.36800438.031700.518203.605901.79740K562PKM
LCP2ENSG00000043462.785.72940431.49040-2.3315034.6019032.12200K562POLR2G
LCP2ENSG00000043462.7603.84760360.619100.743603.598201.45400K562PRPF6
LCP2ENSG00000043462.71008.71710387.576001.3799031.1030028.95420K562PTBP1
LCP2ENSG00000043462.7329.53270644.47430-0.9677011.599109.92290K562PUF60
LCP2ENSG00000043462.7920.68160685.596600.425203.540602.32410K562PUM1
LCP2ENSG00000043462.71173.42120671.649900.8048013.7846011.65120K562PUM2
LCP2ENSG00000043462.7556.92840410.414400.440302.739802.19860K562PUS1
LCP2ENSG00000043462.7531.97310295.811200.846604.927102.93950K562RAVER1
LCP2ENSG00000043462.7224.41950399.86100-0.833307.392306.45480K562RBM15
LCP2ENSG00000043462.7644.99200371.561600.795608.499706.90900K562RBM22
LCP2ENSG00000043462.7203.36580374.96620-0.882707.182405.57850K562RCC2
LCP2ENSG00000043462.7161.07590278.81240-0.791604.176803.17170K562RPS19
LCP2ENSG00000043462.7212.49930322.57720-0.602202.723501.72760K562RPS3
LCP2ENSG00000043462.7135.30050279.86220-1.048505.976404.04430K562RRP9
LCP2ENSG00000043462.7179.70080384.54640-1.0976010.204608.20130K562SAFB
LCP2ENSG00000043462.7187.38110397.54170-1.085109.974607.43150K562SDAD1
LCP2ENSG00000043462.785.89990234.22330-1.447208.540606.05040K562SERBP1
LCP2ENSG00000043462.7210.62850322.45730-0.614404.069303.02550K562SF3B4
LCP2ENSG00000043462.7291.17710491.11110-0.754207.389204.93800K562SRSF9
LCP2ENSG00000043462.7404.98790562.30330-0.473503.659201.93270K562SUCLG1
LCP2ENSG00000043462.7243.83020457.81470-0.908903.950902.11940K562SUPT6H
LCP2ENSG00000043462.7292.96970432.83050-0.563103.153002.27670K562SYNCRIP
LCP2ENSG00000043462.7266.34710384.51970-0.529803.095102.34570K562TARDBP
LCP2ENSG00000043462.7470.37670323.233900.541103.621201.78630K562TBRG4
LCP2ENSG00000043462.7200.62140395.21890-0.978207.655506.03120K562TIAL1
LCP2ENSG00000043462.7158.66270300.61390-0.921905.788104.08620K562U2AF1
LCP2ENSG00000043462.7147.82510310.43250-1.070409.542008.04650K562U2AF2
LCP2ENSG00000043462.71233.76150726.711400.7635010.099907.65150K562UBE2L3
LCP2ENSG00000043462.71126.43380515.354701.1280015.0479012.61810K562UTP3
LCP2ENSG00000043462.7320.25630506.21970-0.660505.887604.58760K562WDR3
LCP2ENSG00000043462.7207.95690526.36310-1.3398021.8596019.82700K562WDR43
LCP2ENSG00000043462.7761.78020389.432200.967904.658602.38660K562XPO5
LCP2ENSG00000043462.7156.76010339.71700-1.115805.856903.34500K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LCP2 is not available on ENCORE database.





1 RBPs can affect the splicing of LCP2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSLCP2ENSG00000043462.7chr5-1696858691696860231696858691696858821696881101696881410.101000.019720.09426longerK562AQR
A3SSLCP2ENSG00000043462.7chr5-1696777331696779051696777331696778891696794371696795150.129000.003610.02170longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LCP2 is not avaliable on ENCORE database.