GTF3C1

General Information

Gene Name       : GTF3C1
Gene ID             : ENSG00000077235.17
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: GTF3C1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GTF3C1ENSG00000077235.1711.8526.3219.09ENCSR000AEF
HepG2GTF3C1ENSG00000077235.1786.2570.5678.41ENCSR985KAT
K562GTF3C1ENSG00000077235.1729.7630.8930.33ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GTF3C1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GTF3C1 RNA is bound by 39 proteins.  







eCLIP assay for GTF3C1 is not avaliable on ENCORE database.





39 proteins are bound to GTF3C1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr162747195127472021-3'-UTR,intron-Distal,intron-Proximal4.832115.24231K562UPF1
chr162748778727487849-3'-UTR,CDS,intron-Distal3.290837.09278HepG2PPIG
chr162748302327483090-3'-UTR,CDS,intron-Distal,intron-Proximal3.562423.95099HepG2PRPF8
chr162747259627472688-3'-UTR,CDS,intron-Distal,intron-Proximal5.2169532.76180HepG2UPF1
chr162747244427472489-3'-UTR,intron-Distal4.060016.36332HepG2UPF1
chr162747251527472595-3'-UTR,intron-Distal,intron-Proximal5.6574811.59236HepG2AKAP1
chr162747215727472228-3'-UTR,intron-Distal5.221257.78976HepG2AKAP1
chr162747215827472230-3'-UTR,intron-Distal4.950685.25389K562UPF1
chr162747209927472157-3'-UTR,intron-Distal3.995006.94394HepG2AKAP1
chr162747217027472282-3'-UTR,intron-Distal6.9931334.58889HepG2UPF1
chr162747237427472406-3'-UTR,intron-Distal,intron-Proximal4.962547.70160HepG2UPF1
chr162747259427472681-3'-UTR,CDS,intron-Distal,intron-Proximal3.497447.87634HepG2G3BP1
chr162747233427472416-3'-UTR,intron-Distal,intron-Proximal3.522327.16367HepG2AKAP1
chr162748785327487921-3'-UTR,CDS,intron-Distal,intron-Proximal5.739728.93732K562SF3B4
chr162748302327483048-3'-UTR,intron-Distal,intron-Proximal5.151278.52787K562AQR
chr162747253327472596-3'-UTR,intron-Distal,intron-Proximal5.5134521.20565HepG2UPF1
chr162748772927487797-3'-UTR,CDS,intron-Distal,intron-Proximal5.1485117.45859HepG2PRPF8
chr162747255227472582-3'-UTR,intron-Distal,intron-Proximal4.432154.83675HepG2G3BP1
chr162748309027483172-3'-UTR,CDS,intron-Distal,intron-Proximal4.732827.85193K562YBX3
chr162747208527472170-3'-UTR,intron-Distal6.3593022.12221HepG2UPF1
chr162747259727472672-3'-UTR,intron-Distal,intron-Proximal3.386736.82238HepG2AKAP1
chr162748142827481438-3'-UTR,CDS,intron-Distal,intron-Proximal3.287863.72202HepG2G3BP1
chr162748149227481576-3'-UTR,CDS,intron-Distal,intron-Proximal4.663635.17013K562RBM15
chr162748297627483110-3'-UTR,CDS,intron-Distal,intron-Proximal3.251424.53546K562BUD13
chr162748318127483242-3'-UTR,CDS,intron-Distal,intron-Proximal4.784877.83423K562YBX3
chr162747222827472284-3'-UTR,intron-Distal4.145257.98114HepG2AKAP1
chr162747260727472684-3'-UTR,CDS,intron-Distal,intron-Proximal3.613175.46673HepG2FXR2
chr162748980727489928-3'-UTR,CDS,intron-Distal,intron-Proximal4.8757911.66069K562SF3B4
chr162747204427472158-3'-UTR,intron-Distal4.2918912.07826K562UPF1
chr162748304827483069-3'-UTR,CDS,intron-Distal,intron-Proximal4.455117.30031K562AQR
chr162749739827497475-5'-UTR,CDS,intron-Distal,intron-Proximal3.4890310.97889HepG2BUD13
chr162749732427497473-5'-UTR,CDS,intron-Distal,intron-Proximal4.626265.23978HepG2PRPF4
chr162749553227495546-5'-UTR,CDS,intron-Distal4.381553.59941K562UCHL5
chr162749732527497420-5'-UTR,CDS,intron-Distal,intron-Proximal4.515069.20390K562UCHL5
chr162749737927497464-5'-UTR,CDS,intron-Distal,intron-Proximal3.594597.70405K562ZNF622
chr162749731927497379-5'-UTR,CDS,intron-Distal3.5428010.64832HepG2PPIG
chr162749553627495613-5'-UTR,CDS,intron-Distal3.9077614.25636HepG2GRWD1
chr162749733227497379-5'-UTR,CDS,intron-Distal3.296203.39477K562BUD13
chr162749737927497473-5'-UTR,CDS,intron-Distal,intron-Proximal4.1507817.03352HepG2PPIG
chr162749738827497463-5'-UTR,CDS,intron-Distal,intron-Proximal3.390585.50142HepG2ZNF800
chr162749737527497468-5'-UTR,CDS,intron-Distal,intron-Proximal3.053849.41862HepG2FXR2
chr162749732027497372-5'-UTR,CDS,intron-Distal4.7838210.47008HepG2BCLAF1
chr162749732427497462-5'-UTR,CDS,intron-Distal,intron-Proximal3.037426.01724K562GRWD1
chr162749732127497376-5'-UTR,CDS,intron-Distal4.982147.34525K562ZNF622
chr162749555827495603-5'-UTR,CDS,intron-Distal3.861286.24124HepG2G3BP1
chr162749726427497320-5'-UTR,CDS,intron-Distal,intron-Proximal3.0731010.93821HepG2PRPF8
chr162749738327497456-5'-UTR,CDS,intron-Distal,intron-Proximal4.6754114.18756HepG2BCLAF1
chr162749731627497391-5'-UTR,CDS,intron-Distal,intron-Proximal3.4753710.23609HepG2BUD13
chr162751721927517246-CDS,intron-Distal,intron-Proximal3.659434.04629HepG2G3BP1
chr162755677427556814-CDS,intron-Distal4.652216.29942HepG2G3BP1
chr162749440227494446-CDS,intron-Distal,intron-Proximal3.589064.22563K562UCHL5
chr162747602427476137-CDS,intron-Distal3.502407.81720K562FXR2
chr162747663127476668-CDS,intron-Distal3.442173.95301K562ZNF622
chr162751258927512664-CDS,intron-Distal,intron-Proximal3.596428.74772HepG2PPIG
chr162748069427480746-CDS,intron-Distal,intron-Proximal3.874363.86978K562YBX3
chr162749963027499699-CDS,intron-Distal,intron-Proximal4.357098.94398K562UCHL5
chr162751990527519977-CDS,intron-Distal,intron-Proximal3.517134.63409HepG2LIN28B
chr162749957027499620-CDS,intron-Distal,intron-Proximal4.628154.77252K562ZNF622
chr162750375127503778-CDS,intron-Distal3.143324.73488HepG2GRWD1
chr162750908727509140-CDS,intron-Distal3.930749.56778HepG2G3BP1
chr162750452627504569-CDS,intron-Distal3.375814.51003HepG2PPIG
chr162755664327556691-CDS,intron-Distal3.427885.95375K562ZNF622
chr162747653727476582-CDS,intron-Distal,intron-Proximal4.123638.27931K562AQR
chr162749961527499668-CDS,intron-Distal,intron-Proximal4.362668.39611HepG2GRWD1
chr162748078627480870-CDS,intron-Distal3.5216910.12026HepG2G3BP1
chr162749962627499666-CDS,intron-Distal,intron-Proximal3.104864.34339HepG2FXR2
chr162754963527549664-CDS,intron-Distal3.051125.47500HepG2PPIG
chr162747671227476762-CDS,intron-Distal5.119396.54449K562RBM15
chr162749966427499718-CDS,intron-Distal3.213803.84837K562GRWD1
chr162751843627518477-CDS,intron-Distal3.652284.24070HepG2GRWD1
chr162754461027544693-CDS,intron-Distal,intron-Proximal3.172144.85633HepG2G3BP1
chr162751413827514187-CDS,intron-Distal,intron-Proximal5.157474.35676HepG2PRPF8
chr162749954727499630-CDS,intron-Distal,intron-Proximal4.495839.20390K562UCHL5
chr162751717527517235-CDS,intron-Distal,intron-Proximal5.280789.61125HepG2PRPF8
chr162749243427492492-CDS,intron-Distal,intron-Proximal3.996789.43524HepG2BCLAF1
chr162754003127540042-CDS,intron-Distal3.660684.41267HepG2PPIG
chr162750661027506658-CDS,intron-Distal4.461845.51254HepG2RPS3
chr162750908827509140-CDS,intron-Distal3.066465.24964HepG2FXR2
chr162747604527476128-CDS,intron-Distal4.866916.66343K562FMR1
chr162751731727517423-CDS,intron-Distal4.293899.05280HepG2GRWD1
chr162750901227509087-CDS,intron-Distal5.8214215.56723HepG2G3BP1
chr162751995527519976-CDS,intron-Distal4.390174.69712HepG2G3BP1
chr162751735227517409-CDS,intron-Distal3.119346.35830HepG2G3BP1
chr162750990427509953-CDS,intron-Distal,intron-Proximal4.048066.20582HepG2PRPF8
chr162750670327506740-CDS,intron-Distal3.346004.41784HepG2GRWD1
chr162752312727523158-CDS,intron-Distal3.869305.75388HepG2BUD13
chr162749955927499626-CDS,intron-Distal,intron-Proximal3.521786.62228HepG2FXR2
chr162750045127500513-CDS,intron-Distal,intron-Proximal4.644364.67744K562BUD13
chr162749966827499713-CDS,intron-Distal3.930285.52031HepG2GRWD1
chr162751001827510051-CDS,intron-Distal4.139044.04622HepG2GRWD1
chr162747284527472883-CDS,intron-Distal3.313733.22545HepG2PPIG
chr162750036227500417-CDS,intron-Distal,intron-Proximal3.156364.59873K562UCHL5
chr162750908327509137-CDS,intron-Distal3.958218.08603HepG2BCLAF1
chr162756107327561188-CDS,intron-Distal3.160787.88496HepG2RPS3
chr162754960727549636-CDS,intron-Distal4.496766.03821HepG2GRWD1
chr162751826227518368-CDS,intron-Distal3.351384.87371HepG2FXR2
chr162751812327518170-CDS,intron-Distal,intron-Proximal5.416117.81430K562AQR
chr162753995327540001-CDS,intron-Distal3.098404.33023K562ZNF622
chr162747490927474982-CDS,intron-Distal,intron-Proximal3.666323.84691HepG2SF3B4
chr162750095227501000-CDS,intron-Distal3.345075.74594HepG2G3BP1
chr162748076327480826-CDS,intron-Distal4.018065.57819K562UCHL5
chr162752310327523186-CDS,intron-Distal3.695949.53137HepG2G3BP1
chr162754963627549661-CDS,intron-Distal3.118723.17744HepG2GRWD1
chr162749989827499956-CDS,intron-Distal3.466156.09767K562UCHL5
chr162753995027540037-CDS,intron-Distal3.617999.60317HepG2G3BP1
chr162755676627556812-CDS,intron-Distal3.498273.31745K562ZNF622
chr162749955027499673-CDS,intron-Distal,intron-Proximal3.3970712.18865HepG2G3BP1
chr162752306827523112-CDS,intron-Distal,intron-Proximal4.220207.71112HepG2LIN28B
chr162751740627517442-CDS,intron-Distal,intron-Proximal3.797993.02321K562U2AF2
chr162750903527509088-CDS,intron-Distal3.975138.29433HepG2FXR2
chr162749995527500006-CDS,intron-Distal,intron-Proximal5.899138.30797HepG2SF3A3
chr162752308127523160-CDS,intron-Distal5.5633911.59226K562FXR2
chr162750671127506806-CDS,intron-Distal3.8720612.61012HepG2G3BP1
chr162754947127549520-CDS,intron-Distal,intron-Proximal4.607704.02817HepG2PRPF8
chr162750045927500522-CDS,intron-Distal,intron-Proximal3.625348.77242HepG2U2AF2
chr162749987527499917-CDS,intron-Distal4.204237.57443HepG2BUD13
chr162751835127518471-CDS,intron-Distal3.076456.13910HepG2ZNF800
chr162748080727480868-CDS,intron-Distal3.907716.94346HepG2BUD13
chr162756106427561181-CDS,intron-Distal3.8913710.61740K562FMR1
chr162750371927503775-CDS,intron-Distal3.440515.50942K562FXR2
chr162747566227475759-CDS,intron-Distal,intron-Proximal4.0437316.80068HepG2PRPF8
chr162747361427473689-CDS,intron-Distal,intron-Proximal3.029383.18660HepG2PABPN1
chr162750036127500433-CDS,intron-Distal,intron-Proximal5.5588612.00090HepG2GRWD1
chr162750087027500926-CDS,intron-Distal,intron-Proximal3.556305.73990HepG2PRPF8
chr162756099627561034-CDS,intron-Distal4.198834.94878HepG2GRWD1
chr162750372927503806-CDS,intron-Distal4.166843.89948K562YBX3
chr162751833927518440-CDS,intron-Distal3.490359.61064HepG2G3BP1
chr162747270227472738-CDS,intron-Distal3.469154.31813HepG2G3BP1
chr162752306827523078-CDS,intron-Distal,intron-Proximal4.336148.16865K562LIN28B
chr162751253127512613-CDS,intron-Distal,intron-Proximal3.350444.05781K562DDX24
chr162754921827549248-CDS,intron-Distal3.215664.26492HepG2BCLAF1
chr162749993127499953-CDS,intron-Distal3.223013.39306HepG2GRWD1
chr162750670327506745-CDS,intron-Distal3.060603.24137HepG2EIF3D
chr162748076627480831-CDS,intron-Distal3.285176.70384HepG2PPIG
chr162751817527518208-CDS,intron-Distal3.017924.32134HepG2G3BP1
chr162749983827499887-CDS,intron-Distal,intron-Proximal3.848785.64484HepG2PRPF8
chr162751831727518432-CDS,intron-Distal4.461639.24647K562FXR2
chr162747374827473783-CDS,intron-Distal3.562484.77136HepG2PPIG
chr162749987927499917-CDS,intron-Distal3.363074.45064HepG2GRWD1
chr162750092827500971-CDS,intron-Distal3.028703.25772K562ZNF622
chr162750676327506811-CDS,intron-Distal3.596635.31167HepG2GRWD1
chr162751724727517290-CDS,intron-Distal3.615185.26203HepG2FXR2
chr162747658127476669-CDS,intron-Distal4.348128.03807K562RBM15
chr162749962327499682-CDS,intron-Distal,intron-Proximal3.3354512.43843HepG2PPIG
chr162749239927492500-CDS,intron-Distal,intron-Proximal3.195418.17224HepG2FXR2
chr162756114027561209-CDS,intron-Distal3.9491112.57266K562FXR2
chr162755677627556818-CDS,intron-Distal4.139076.65960HepG2BCLAF1
chr162750670827506778-CDS,intron-Distal5.170835.75302HepG2EIF3H
chr162751251927512552-CDS,intron-Distal,intron-Proximal3.718374.41784HepG2GRWD1
chr162749991727499961-CDS,intron-Distal,intron-Proximal3.503686.22359HepG2BUD13
chr162754953927549601-CDS,intron-Distal3.548273.61076HepG2HLTF
chr162755665827556770-CDS,intron-Distal3.159584.22109HepG2LIN28B
chr162752307827523169-CDS,intron-Distal3.679349.53601K562LIN28B
chr162751993827519977-CDS,intron-Distal,intron-Proximal5.158667.42079K562LIN28B
chr162751252627512582-CDS,intron-Distal,intron-Proximal4.437064.44454K562UCHL5
chr162750092327500957-CDS,intron-Distal4.021033.32022K562UCHL5
chr162756105427561140-CDS,intron-Distal5.1452713.62419K562FXR2
chr162754922427549247-CDS,intron-Distal4.211863.61890HepG2G3BP1
chr162752311227523166-CDS,intron-Distal4.745885.19012HepG2LIN28B
chr162756112527561205-CDS,intron-Distal3.773213.58697HepG2UCHL5
chr162748083227480866-CDS,intron-Distal3.652284.65365HepG2GRWD1
chr162750904427509087-CDS,intron-Distal3.299455.30777HepG2PPIG
chr162751251627512578-CDS,intron-Distal,intron-Proximal3.195506.93667HepG2PPIG
chr162749955227499647-CDS,intron-Distal,intron-Proximal3.159856.77648HepG2TRA2A
chr162747565827475708-CDS,intron-Distal,intron-Proximal3.811516.24124HepG2G3BP1
chr162754461027544645-CDS,intron-Distal,intron-Proximal4.198996.92541HepG2PPIG
chr162751825327518340-CDS,intron-Distal3.284884.08943HepG2LIN28B
chr162747487127474965-CDS,intron-Distal,intron-Proximal5.154166.02529K562SF3B4
chr162750088427500937-CDS,intron-Distal,intron-Proximal4.782514.97857HepG2AQR
chr162751811527518169-CDS,intron-Distal,intron-Proximal4.1791814.00282HepG2PRPF8
chr162750366427503713-CDS,intron-Distal3.359317.10608HepG2GRWD1
chr162750042227500497-CDS,intron-Distal,intron-Proximal3.061877.83839HepG2PPIG
chr162748083227480865-CDS,intron-Distal4.604863.29312HepG2FXR2
chr162751426127514311-CDS,intron-Distal,intron-Proximal3.178676.35830HepG2G3BP1
chr162747565827475707-CDS,intron-Distal,intron-Proximal5.023907.06060HepG2PPIG
chr162750658827506643-CDS,intron-Distal3.718923.48848HepG2FXR2
chr162751252227512584-CDS,intron-Distal,intron-Proximal3.236053.51824HepG2EIF3D
chr162754952927549557-CDS,intron-Distal3.398693.86355HepG2PPIG
chr162750663827506687-CDS,intron-Distal3.051133.17233HepG2BCLAF1
chr162749239927492434-CDS,intron-Distal,intron-Proximal3.583556.74947HepG2BCLAF1
chr162749742027497476-CDS,intron-Distal,intron-Proximal5.074497.31591K562UCHL5
chr162749954827499615-CDS,intron-Distal,intron-Proximal4.006865.31167HepG2GRWD1
chr162751826827518359-CDS,intron-Distal3.938373.66349K562LIN28B
chr162751824827518339-CDS,intron-Distal3.7344011.51553HepG2G3BP1
chr162750902127509083-CDS,intron-Distal4.9275811.54096HepG2BCLAF1
chr162749441127494458-CDS,intron-Distal,intron-Proximal3.408863.62357HepG2U2AF2
chr162749595227496007-intron-Distal4.511285.54528HepG2QKI
chr162750349427503571-intron-Distal,intron-Proximal4.411837.14115HepG2XPO5
chr162753097427531037-intron-Distal6.4885422.99132HepG2PTBP1
chr162747506427475168-intron-Distal4.115765.55843HepG2RBFOX2
chr162753983327539910-intron-Distal,intron-Proximal4.692245.01842HepG2PRPF8
chr162749942227499521-intron-Distal,intron-Proximal3.463884.96675K562TIA1
chr162749023627490325-intron-Distal3.616865.80375HepG2PTBP1
chr162750088027500901-intron-Distal,intron-Proximal3.961414.00320K562AQR
chr162753596127536008-intron-Distal3.638875.54602K562QKI
chr162753048627530599-intron-Distal3.847198.00843HepG2PCBP2
chr162749600727496104-intron-Distal4.8432318.96359HepG2QKI
chr162750600927506053-intron-Distal,intron-Proximal4.832364.40230HepG2RBM22
chr162750649027506532-intron-Distal,intron-Proximal4.215043.59236HepG2AQR
chr162749224427492332-intron-Distal,intron-Proximal4.416833.79000HepG2U2AF2
chr162753035627530445-intron-Distal3.902704.86842HepG2PCBP2
chr162748787227487928-intron-Distal,intron-Proximal4.215608.19646HepG2SF3B4
chr162753103727531073-intron-Distal4.714825.84045HepG2PTBP1
chr162749023127490321-intron-Distal4.312537.72109HepG2U2AF2
chr162749604427496108-intron-Distal3.309204.01234HepG2HNRNPL
chr162747498327475039-intron-Distal,intron-Proximal3.040173.42293HepG2HNRNPC
chr162753044027530500-intron-Distal3.368883.89405HepG2PTBP1
chr162749146827491528-intron-Distal3.343454.81055HepG2HNRNPC
chr162753588427535975-intron-Distal4.4755320.31627HepG2QKI
chr162753296827533099-intron-Distal4.410464.51974K562KHDRBS1
chr162750090127500923-intron-Distal,intron-Proximal3.436593.49168K562AQR
chr162753096327531024-intron-Distal5.9672813.55741K562PTBP1
chr162749278027492851-intron-Distal3.913853.37800K562HNRNPU
chr162753586827535961-intron-Distal5.7650615.30460K562QKI
chr162749547527495530-intron-Distal,intron-Proximal5.806587.36776HepG2PRPF8
chr162753582627535884-intron-Distal5.274488.96592HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GTF3C1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GTF3C1 is not available on ENCORE database.

  • 60 RBPs can affect the levels of GTF3C1.  








The Knockdown/knockout RNA-Seq assay for GTF3C1 is not available on ENCORE database.





60 RBPs can affect the gene expression of GTF3C1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GTF3C1ENSG00000077235.134049.330303533.932300.196302.858702.24250HepG2ACO1
GTF3C1ENSG00000077235.135154.016003688.254800.482704.175803.54070HepG2AKAP1
GTF3C1ENSG00000077235.134040.811203550.578800.186502.271001.56850HepG2AKAP8L
GTF3C1ENSG00000077235.136280.015105174.544900.279204.785103.92410HepG2AUH
GTF3C1ENSG00000077235.136533.549904226.825300.6282010.485209.41810HepG2BOP1
GTF3C1ENSG00000077235.133906.047803533.216100.144601.914801.34740HepG2CKAP4
GTF3C1ENSG00000077235.132809.889103880.40960-0.465705.412204.48040HepG2CPSF6
GTF3C1ENSG00000077235.133700.009003268.404900.178802.510901.71360HepG2DDX19B
GTF3C1ENSG00000077235.134911.387203532.728000.475204.669303.87360HepG2DDX3X
GTF3C1ENSG00000077235.133781.889303035.489400.317102.043101.50530HepG2DDX6
GTF3C1ENSG00000077235.133477.572202759.202700.333702.774901.85370HepG2EEF2
GTF3C1ENSG00000077235.134753.445705941.32080-0.321806.302505.45720HepG2ETF1
GTF3C1ENSG00000077235.135694.094304380.218900.378403.031002.22870HepG2FIP1L1
GTF3C1ENSG00000077235.134565.022403253.609400.488505.044104.13090HepG2FXR1
GTF3C1ENSG00000077235.132163.070703017.58610-0.480304.331103.50730HepG2G3BP1
GTF3C1ENSG00000077235.132329.422803057.01210-0.392103.865503.05190HepG2HNRNPK
GTF3C1ENSG00000077235.132798.241304197.69540-0.585107.543306.56200HepG2HNRNPLL
GTF3C1ENSG00000077235.133583.178202755.780200.378708.031407.03890HepG2HNRNPU
GTF3C1ENSG00000077235.133959.272603067.092000.368303.090202.38180HepG2IGF2BP2
GTF3C1ENSG00000077235.134951.441603272.777200.597206.312205.39060HepG2MATR3
GTF3C1ENSG00000077235.135002.499203349.715200.578506.428905.47990HepG2NCBP2
GTF3C1ENSG00000077235.132551.743503722.15180-0.544707.163605.99680HepG2NSUN2
GTF3C1ENSG00000077235.133714.544303134.172500.245003.706403.02540HepG2PCBP1
GTF3C1ENSG00000077235.132830.215903668.94230-0.374507.191106.01290HepG2PRPF4
GTF3C1ENSG00000077235.132841.753202247.796400.338202.190101.46850HepG2PRPF8
GTF3C1ENSG00000077235.133842.142103189.256900.268604.174603.53290HepG2PTBP1
GTF3C1ENSG00000077235.134394.776703574.934700.297803.064702.44280HepG2PUF60
GTF3C1ENSG00000077235.134896.323203795.012900.3675011.4036010.37120HepG2PUM1
GTF3C1ENSG00000077235.134684.719803453.790000.439708.003207.02480HepG2QKI
GTF3C1ENSG00000077235.131938.971502443.25920-0.333502.380401.39800HepG2RCC2
GTF3C1ENSG00000077235.134170.985403549.237700.232803.421402.83320HepG2NELFE
GTF3C1ENSG00000077235.133696.546104631.26300-0.325203.376602.63240HepG2RPLP0
GTF3C1ENSG00000077235.133216.024902179.489000.561208.932707.90350HepG2RPS19
GTF3C1ENSG00000077235.133400.303002774.741100.293201.999901.31140HepG2RPS2
GTF3C1ENSG00000077235.136247.889604759.940900.392302.140001.54560HepG2SF3A3
GTF3C1ENSG00000077235.134056.717003320.214400.288905.021204.26460HepG2SF3B4
GTF3C1ENSG00000077235.133460.965802861.898500.274105.733604.86050HepG2SMN1
GTF3C1ENSG00000077235.134871.853003529.801500.4648012.2387011.04860HepG2SRSF5
GTF3C1ENSG00000077235.133453.232002819.584100.292405.370004.64550HepG2SRSF9
GTF3C1ENSG00000077235.134340.718404869.42030-0.165802.234601.76240HepG2SSB
GTF3C1ENSG00000077235.135951.387904014.293200.5680023.2591021.74070HepG2SUCLG1
GTF3C1ENSG00000077235.133583.934602677.647700.420506.332705.63220HepG2TIAL1
GTF3C1ENSG00000077235.133143.416302701.699500.218402.881502.30920HepG2TRIM56
GTF3C1ENSG00000077235.134134.412703492.660900.243302.362101.56110HepG2TUFM
GTF3C1ENSG00000077235.134569.855603747.112700.286302.476301.87980HepG2U2AF1
GTF3C1ENSG00000077235.134952.812403696.993000.421803.334002.41600HepG2UBE2L3
GTF3C1ENSG00000077235.134935.238004075.537800.276005.405704.61560HepG2UTP3
GTF3C1ENSG00000077235.132956.605403620.81550-0.292405.984105.05640HepG2ZC3H8
GTF3C1ENSG00000077235.135436.641204642.665800.227704.859704.18680HepG2ZNF622
GTF3C1ENSG00000077235.133522.493702950.227100.255704.025703.36430K562AGGF1
GTF3C1ENSG00000077235.132261.017902814.70770-0.316002.463101.90300K562AQR
GTF3C1ENSG00000077235.133788.234204933.50980-0.381105.610704.21950K562CELF1
GTF3C1ENSG00000077235.133832.234103343.967300.196502.399201.78660K562DDX47
GTF3C1ENSG00000077235.132145.554301694.302000.340602.529501.65970K562EFTUD2
GTF3C1ENSG00000077235.13686.310501137.89320-0.729404.785803.79680K562G3BP2
GTF3C1ENSG00000077235.132415.097703381.21220-0.485506.716705.53150K562GRSF1
GTF3C1ENSG00000077235.131776.772802943.96340-0.7285011.439909.85020K562HSPD1
GTF3C1ENSG00000077235.132271.877201618.894200.488802.746201.72470K562IGF2BP2
GTF3C1ENSG00000077235.132924.319903319.14900-0.182703.136202.34540K562NSUN2
GTF3C1ENSG00000077235.131747.518602465.04190-0.496305.441804.22970K562PPIG
GTF3C1ENSG00000077235.133762.711604656.48760-0.307503.618002.38780K562PUM1
GTF3C1ENSG00000077235.133620.738602966.350400.287503.796903.11840K562RBM15
GTF3C1ENSG00000077235.131102.460301507.69390-0.451604.927303.60230K562RCC2
GTF3C1ENSG00000077235.132122.771101619.590000.390203.246302.48400K562SRSF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GTF3C1 is not available on ENCORE database.





9 RBPs can affect the splicing of GTF3C1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGTF3C1ENSG00000077235.13chr16-274736142747380727471933274728832747486127474913-0.113000.004210.04037excludedK562AQR
A3SSGTF3C1ENSG00000077235.13chr16-2748154327481782274815432748171627483068274832410.174000.000000.00000longerK562AQR
A3SSGTF3C1ENSG00000077235.13chr16-2747373027473873274737302747380727474861274749130.137000.000050.00043longerK562AQR
A3SSGTF3C1ENSG00000077235.13chr16-2749987427499975274998742749995627500363275004990.065000.001080.00746longerK562AQR
A3SSGTF3C1ENSG00000077235.13chr16-2753991827540097275399182754004227544611275447430.071000.000240.00192longerK562AQR
A3SSGTF3C1ENSG00000077235.13chr16-2748072227480889274807222748087127481428274817160.098000.000000.00000longerK562AQR
A3SSGTF3C1ENSG00000077235.13chr16-2748777127487932274877712748786527489789274898520.065000.000480.00362longerK562AQR
A3SSGTF3C1ENSG00000077235.13chr16-2754910427549282275491042754924827549500275496770.100000.000380.00293longerK562AQR
A5SSGTF3C1ENSG00000077235.13chr16-274756402747615727475715274761572747486127474913-0.492000.000000.00000shorterHepG2RBM22
RIGTF3C1ENSG00000077235.13chr16-2747486127476157274748612747491327475715274761570.223000.017530.09100includedK562PUS1
RIGTF3C1ENSG00000077235.13chr16-2747486127476157274748612747491327475640274761570.382000.000470.00731includedHepG2SF3A3
RIGTF3C1ENSG00000077235.13chr16-2747486127476157274748612747491327475640274761570.799000.000000.00000includedHepG2U2AF2
RIGTF3C1ENSG00000077235.13chr16-2747486127476157274748612747491327475640274761570.494000.001230.03039includedHepG2FTO
RIGTF3C1ENSG00000077235.13chr16-2747486127476157274748612747491327475640274761570.384000.004670.04357includedHepG2U2AF1
RIGTF3C1ENSG00000077235.13chr16-2747486127476157274748612747491327475640274761570.208000.003120.04698includedHepG2G3BP1
RIGTF3C1ENSG00000077235.13chr16-2747486127476157274748612747491327475640274761570.418000.000330.00508includedHepG2RBM22
RIGTF3C1ENSG00000077235.13chr16-274748612747615727474861274749132747571527476157-0.506000.000000.00000excludedHepG2RBM22
RIGTF3C1ENSG00000077235.13chr16-2747486127476157274748612747491327475640274761570.243000.003170.03439includedHepG2HNRNPK
RIGTF3C1ENSG00000077235.13chr16-2747486127476157274748612747491327475640274761570.524000.009590.05192includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GTF3C1 is not avaliable on ENCORE database.