EFNA2

General Information

Gene Name       : EFNA2
Gene ID             : ENSG00000099617.3
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: EFNA2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878EFNA2ENSG00000099617.30.000.000.00ENCSR000AEF
HepG2EFNA2ENSG00000099617.36.010.483.25ENCSR985KAT
K562EFNA2ENSG00000099617.30.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for EFNA2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • EFNA2 RNA is bound by 19 proteins.  







eCLIP assay for EFNA2 is not avaliable on ENCORE database.





19 proteins are bound to EFNA2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1913003221300376+3'-UTR,intron-Distal3.751306.11047HepG2TIAL1
chr1913002991300383+3'-UTR,intron-Distal4.3321719.30742HepG2UPF1
chr1913012911301356+3'-UTR,intron-Distal3.194155.13651HepG2AKAP1
chr1913012461301293+3'-UTR,intron-Distal4.428494.68979HepG2UPF1
chr1912999681300024+3'-UTR,intron-Distal4.087513.61011HepG2AKAP1
chr1913003221300380+3'-UTR,intron-Distal3.758524.91517HepG2LARP4
chr1913003211300371+3'-UTR,intron-Distal3.615386.39870HepG2AKAP1
chr1913007261300805+3'-UTR,intron-Distal3.048754.01423HepG2AKAP1
chr1913012931301373+3'-UTR,intron-Distal4.8352514.80429HepG2UPF1
chr1912999381299989+3'-UTR,CDS,intron-Distal4.849144.93188HepG2UPF1
chr1913007811300868+3'-UTR,intron-Distal3.103364.22482HepG2IGF2BP1
chr1913012981301360+3'-UTR,intron-Distal3.999456.31568HepG2LARP4
chr1913009501301038+3'-UTR,intron-Distal3.822293.18535HepG2LSM11
chr1913007141300779+3'-UTR,intron-Distal4.547463.78681HepG2PCBP2
chr1912860761286173+5'-UTR,CDS,intron-Distal5.330879.31281HepG2DDX3X
chr1912860431286166+5'-UTR,intron-Distal4.933473.75581HepG2DHX30
chr1912862101286272+CDS,intron-Distal4.0438110.43313HepG2DDX3X
chr1912954751295561+CDS,intron-Distal,intron-Proximal3.818674.29246HepG2SF3B4
chr1912893551289431+intron-Distal3.288983.61668HepG2IGF2BP1
chr1912938541293917+intron-Distal3.921566.48652HepG2CSTF2T
chr1912876101287706+intron-Distal3.435703.51682HepG2RBFOX2
chr1912950651295115+intron-Distal3.516303.92299HepG2CSTF2T
chr1912960281296087+intron-Distal4.386114.10564HepG2CSTF2T
chr1912930871293146+intron-Distal5.086738.56618HepG2CSTF2T
chr1912939871294030+intron-Distal3.429113.69530HepG2CSTF2T
chr1912868781286953+intron-Distal3.8736010.53086HepG2CSTF2T
chr1912940061294055+intron-Distal4.269393.25012HepG2FKBP4
chr1912953341295473+intron-Distal,intron-Proximal4.582285.59072HepG2HNRNPK
chr1912959861296080+intron-Distal5.571477.81647HepG2FAM120A
chr1912881511288213+intron-Distal4.302599.17322HepG2CSTF2T
chr1912890531289091+intron-Distal3.741366.26465HepG2CSTF2T
chr1912960141296118+intron-Distal3.082613.53159HepG2DROSHA
chr1912933561293413+intron-Distal4.888777.60000HepG2CSTF2T
chr1912896551289719+intron-Distal4.133818.28918HepG2CSTF2T
chr1912868871286963+intron-Distal3.978893.25631HepG2PRPF4
chr1912870041287045+intron-Distal4.061933.67126HepG2NKRF
chr1912875391287610+intron-Distal4.030803.45219HepG2RBFOX2
chr1912899691290031+intron-Distal3.547364.64721HepG2NKRF
chr1912949571294989+intron-Distal3.217133.46580HepG2CSTF2T
chr1912881511288200+intron-Distal3.747204.33898HepG2FAM120A
chr1912887721288849+intron-Distal4.6389812.81546HepG2CSTF2T
chr1912883541288386+intron-Distal3.617605.80161HepG2CSTF2T
chr1912919331291981+intron-Distal4.595406.44863HepG2CSTF2T
chr1912952201295334+intron-Distal3.930446.82867HepG2HNRNPK
chr1912942641294352+intron-Distal4.5502610.62681HepG2CSTF2T
chr1912910271291050+intron-Distal4.223824.86859HepG2CSTF2T
chr1912941361294171+intron-Distal4.355334.86859HepG2CSTF2T
chr1912872641287335+intron-Distal4.0000911.49466HepG2CSTF2T
chr1912878701287931+intron-Distal5.168488.56618HepG2CSTF2T
chr1912970251297074+intron-Distal4.201273.87340HepG2CSTF2T
chr1912911061291186+intron-Distal4.3971110.86370HepG2CSTF2T
chr1912887791288843+intron-Distal3.812403.79474HepG2FAM120A
chr1912952571295437+intron-Distal5.598478.60433HepG2DDX59
chr1912902001290277+intron-Distal3.922039.33519HepG2CSTF2T
chr1912885221288654+intron-Distal4.3736014.89082HepG2CSTF2T
chr1912907561290798+intron-Distal4.719366.94957HepG2CSTF2T
chr1912874291287487+intron-Distal4.908795.41529HepG2CSTF2T
chr1912902071290270+intron-Distal4.897964.86316HepG2FAM120A
chr1912875351287596+intron-Distal5.165189.99173HepG2CSTF2T
chr1912971381297216+intron-Distal3.371793.00221HepG2CSTF2T
chr1912867021286772+intron-Distal3.634128.85479HepG2CSTF2T
chr1912894841289543+intron-Distal5.080678.32666HepG2CSTF2T
chr1912884551288511+intron-Distal3.373403.28007HepG2NKRF
chr1912899781290038+intron-Distal3.719368.61847HepG2CSTF2T
chr1912867051286765+intron-Distal3.351203.87101HepG2NKRF
chr1912868841286953+intron-Distal5.070854.86316HepG2FAM120A
chr1912888431288886+intron-Distal4.288873.41584HepG2FAM120A
chr1912876431287699+intron-Distal4.222989.31613HepG2CSTF2T
chr1912883641288416+intron-Distal3.886005.16644HepG2FAM120A
chr1912927921292852+intron-Distal3.474417.44912HepG2CSTF2T
chr1912884731288526+intron-Distal4.068354.61345HepG2FAM120A
chr1912899801290033+intron-Distal5.107855.15564HepG2FAM120A
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for EFNA2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for EFNA2 is not available on ENCORE database.

  • 77 RBPs can affect the levels of EFNA2.  








The Knockdown/knockout RNA-Seq assay for EFNA2 is not available on ENCORE database.





77 RBPs can affect the gene expression of EFNA2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
EFNA2ENSG00000099617.2412.88150689.69470-0.740203.655102.57690HepG2ABCF1
EFNA2ENSG00000099617.2149.41580611.99550-2.0342013.5696012.48390HepG2AKAP1
EFNA2ENSG00000099617.2350.01850455.58180-0.380302.651501.89880HepG2AKAP8L
EFNA2ENSG00000099617.2159.97670506.32850-1.6622010.982809.49860HepG2ASCC1
EFNA2ENSG00000099617.2588.25830429.426500.453903.443202.69180HepG2AUH
EFNA2ENSG00000099617.2249.02230152.576700.706602.117701.32690HepG2BCLAF1
EFNA2ENSG00000099617.2855.56950357.762401.2578019.9408018.55660HepG2BOP1
EFNA2ENSG00000099617.2241.43350481.06190-0.994605.230604.18520HepG2CIRBP
EFNA2ENSG00000099617.2845.30790567.685100.574304.961503.50790HepG2CPSF7
EFNA2ENSG00000099617.2286.07180187.900300.606303.746202.55790HepG2YBX3
EFNA2ENSG00000099617.2124.96080211.90790-0.762003.107001.63750HepG2CSTF2T
EFNA2ENSG00000099617.2417.90360270.985100.624904.099503.22580HepG2DAZAP1
EFNA2ENSG00000099617.2133.10350223.30250-0.746503.792902.71090HepG2DDX24
EFNA2ENSG00000099617.2301.34170172.717200.802903.168402.34900HepG2DDX55
EFNA2ENSG00000099617.2273.19130177.951900.618302.270401.38320HepG2DHX30
EFNA2ENSG00000099617.2278.62730433.83290-0.638805.555204.65650HepG2DKC1
EFNA2ENSG00000099617.2326.87160184.500700.825006.867205.79960HepG2DNAJC21
EFNA2ENSG00000099617.2343.45820182.876300.909209.733508.59950HepG2DNAJC2
EFNA2ENSG00000099617.2345.99960522.97260-0.596004.448102.97790HepG2EIF2S2
EFNA2ENSG00000099617.2214.51600534.79780-1.317907.407406.36130HepG2EIF4A3
EFNA2ENSG00000099617.2302.19170520.91570-0.785603.503602.73330HepG2EIF4B
EFNA2ENSG00000099617.2396.45400256.023800.630803.602502.68080HepG2EIF4G2
EFNA2ENSG00000099617.2378.75930597.26250-0.657104.937603.51720HepG2ESF1
EFNA2ENSG00000099617.2338.10850493.08770-0.544404.952604.18980HepG2ETF1
EFNA2ENSG00000099617.2473.80900696.36520-0.555502.615901.86620HepG2FIP1L1
EFNA2ENSG00000099617.2291.40100468.76480-0.685905.507504.40850HepG2FUBP3
EFNA2ENSG00000099617.2314.47840500.68440-0.670903.314502.59120HepG2G3BP1
EFNA2ENSG00000099617.2280.15920531.77490-0.924604.669403.49900HepG2G3BP2
EFNA2ENSG00000099617.2180.86030372.24310-1.041404.583003.77110HepG2GPKOW
EFNA2ENSG00000099617.2126.59140254.21820-1.005905.320803.77300HepG2GRSF1
EFNA2ENSG00000099617.2707.90740432.917200.7094010.402708.67460HepG2HDGF
EFNA2ENSG00000099617.2118.38260186.26830-0.653902.356501.75610HepG2HNRNPA1
EFNA2ENSG00000099617.2111.71260207.19060-0.891204.246603.40080HepG2HNRNPC
EFNA2ENSG00000099617.2441.85970275.461800.681607.015805.94230HepG2HNRNPF
EFNA2ENSG00000099617.2266.61910507.40680-0.928404.653403.76640HepG2HNRNPK
EFNA2ENSG00000099617.2261.20070480.29320-0.878806.886805.48580HepG2HNRNPM
EFNA2ENSG00000099617.2278.45650205.820700.436002.439201.86750HepG2HNRNPU
EFNA2ENSG00000099617.2373.89890271.254200.462903.027702.27250HepG2IGF2BP1
EFNA2ENSG00000099617.2345.26670508.87100-0.559602.656701.99360HepG2IGF2BP2
EFNA2ENSG00000099617.2936.57670510.437600.875606.281205.02090HepG2LARP4
EFNA2ENSG00000099617.2782.53580563.324200.474103.476202.56940HepG2MSI2
EFNA2ENSG00000099617.2349.93230176.797100.984905.157003.22090HepG2NOLC1
EFNA2ENSG00000099617.2575.47180251.021801.196808.701907.08380HepG2PABPC1
EFNA2ENSG00000099617.2142.02290203.72520-0.520502.322301.53910HepG2PARN
EFNA2ENSG00000099617.2341.69180459.73590-0.428103.134502.49550HepG2PCBP1
EFNA2ENSG00000099617.2258.59280183.575300.494202.606701.88990HepG2PPIL4
EFNA2ENSG00000099617.2257.32480344.99660-0.423002.091301.41080HepG2PRPF4
EFNA2ENSG00000099617.2290.96830461.87330-0.666606.976106.07530HepG2PUS1
EFNA2ENSG00000099617.244.00360211.45840-2.264706.963705.87180HepG2RAVER1
EFNA2ENSG00000099617.2991.41000657.850200.591607.101505.81410HepG2RBM15
EFNA2ENSG00000099617.2334.86990520.61620-0.636605.863105.12270HepG2NELFE
EFNA2ENSG00000099617.2253.41650484.89100-0.9362010.991709.88740HepG2RECQL
EFNA2ENSG00000099617.237.96890131.66530-1.794006.792805.62180HepG2RRP9
EFNA2ENSG00000099617.2319.16430183.291500.800106.872705.92510HepG2SAFB2
EFNA2ENSG00000099617.2295.60310561.61490-0.925906.471405.41600HepG2SF3A3
EFNA2ENSG00000099617.2340.92550245.840300.471602.629901.94380HepG2SLBP
EFNA2ENSG00000099617.2517.35890144.565401.839308.247805.74480HepG2SNRNP200
EFNA2ENSG00000099617.2166.31020391.21650-1.234105.415104.31290HepG2SNRNP70
EFNA2ENSG00000099617.2161.70110508.36260-1.6525027.6821026.52880HepG2SRSF1
EFNA2ENSG00000099617.2371.32390253.183000.552403.515402.82550HepG2SRSF5
EFNA2ENSG00000099617.2417.00980270.622100.623705.824704.87560HepG2SRSF7
EFNA2ENSG00000099617.2293.45000413.58330-0.495103.821603.19460HepG2SRSF9
EFNA2ENSG00000099617.2144.75980404.09510-1.4810020.3198019.20830HepG2SSB
EFNA2ENSG00000099617.2489.38540287.975700.764906.854905.95270HepG2SUCLG1
EFNA2ENSG00000099617.2137.12210456.94660-1.7366027.4372025.90840HepG2TAF15
EFNA2ENSG00000099617.2218.05570585.56920-1.425108.552406.79000HepG2TBRG4
EFNA2ENSG00000099617.2210.41990115.197800.869102.485201.53440HepG2TFIP11
EFNA2ENSG00000099617.2316.46530199.987200.662004.281503.68780HepG2TIAL1
EFNA2ENSG00000099617.2345.80740201.781500.777106.943906.12030HepG2TRIM56
EFNA2ENSG00000099617.2316.63750168.330800.911402.199501.33180HepG2U2AF2
EFNA2ENSG00000099617.2584.60710265.112801.140803.978002.96410HepG2UBE2L3
EFNA2ENSG00000099617.2336.25270480.86330-0.516104.066303.36080HepG2UTP3
EFNA2ENSG00000099617.2647.16760547.777600.240401.789901.32430HepG2ZNF622
EFNA2ENSG00000099617.227.662307.539301.875302.558002.00780K562AGGF1
EFNA2ENSG00000099617.274.6711010.500702.830009.030908.06840K562AQR
EFNA2ENSG00000099617.235.774009.327201.939303.214402.22170K562MBNL1
EFNA2ENSG00000099617.223.034803.572602.688702.082701.30860K562PSIP1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for EFNA2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of EFNA2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for EFNA2 is not avaliable on ENCORE database.