CREB1

General Information

Gene Name       : CREB1
Gene ID             : ENSG00000118260.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CREB1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CREB1ENSG00000118260.1448.3843.2445.81ENCSR000AEF
HepG2CREB1ENSG00000118260.1434.1032.6033.35ENCSR985KAT
K562CREB1ENSG00000118260.1417.8821.3919.63ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CREB1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CREB1 RNA is bound by 31 proteins.  







eCLIP assay for CREB1 is not avaliable on ENCORE database.





31 proteins are bound to CREB1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2208467959208468058+3'-UTR5.4030511.14878K562PUM2
chr2208461621208461683+3'-UTR,CDS,intron-Proximal3.942144.36528HepG2U2AF2
chr2208440133208440202+3'-UTR,CDS,intron-Distal,intron-Proximal4.324076.95612HepG2PRPF8
chr2208440172208440217+3'-UTR,CDS,intron-Distal,intron-Proximal3.267203.20886K562PRPF8
chr2208442695208442750+3'-UTR,intron-Distal3.344264.76825K562KHSRP
chr2208442517208442585+3'-UTR,intron-Distal3.996863.90026K562KHSRP
chr2208468013208468098+3'-UTR4.893535.79762HepG2FUBP3
chr2208440070208440179+3'-UTR,CDS,intron-Distal,intron-Proximal3.496765.10069HepG2GRWD1
chr2208461639208461701+3'-UTR,CDS3.983403.43980K562ZNF622
chr2208439994208440068+3'-UTR,CDS,intron-Distal,intron-Proximal3.135404.62864K562ZNF622
chr2208394834208394892+5'-UTR,intron-Distal,intron-Proximal4.023533.80401K562SRSF1
chr2208394680208394750+5'-UTR,intron-Proximal4.033953.86664K562DDX3X
chr2208442283208442386+5'-UTR,CDS,intron-Proximal3.425475.53307K562ZNF622
chr2208394662208394740+5'-UTR4.572104.78731HepG2NCBP2
chr2208394771208394823+5'-UTR,intron-Proximal4.263673.28019K562DDX3X
chr2208394783208394853+5'-UTR,intron-Distal,intron-Proximal3.895155.73400HepG2PPIG
chr2208394765208394891+5'-UTR,intron-Distal,intron-Proximal3.700264.86973K562UCHL5
chr2208434903208434998+CDS,intron-Proximal3.729053.96535HepG2AQR
chr2208434970208435052+CDS,intron-Proximal5.042297.84234K562ZNF622
chr2208434904208434974+CDS3.157605.33987HepG2GRWD1
chr2208425829208425879+CDS,intron-Distal,intron-Proximal4.408864.45977HepG2U2AF2
chr2208425800208425927+CDS,intron-Distal,intron-Proximal4.390013.93614HepG2AQR
chr2208425808208425898+CDS,intron-Distal,intron-Proximal5.247596.83960K562AQR
chr2208434974208435053+CDS,intron-Proximal3.112165.39266HepG2GRWD1
chr2208419167208419203+intron-Distal3.876054.24478HepG2CSTF2
chr2208394903208394994+intron-Distal,intron-Proximal3.995673.72434HepG2NCBP2
chr2208394896208394998+intron-Distal,intron-Proximal3.070683.33411HepG2GTF2F1
chr2208394925208394991+intron-Distal,intron-Proximal3.498717.14562K562DROSHA
chr2208423207208423335+intron-Distal4.322324.55788HepG2QKI
chr2208394878208394989+intron-Distal,intron-Proximal4.390578.37354K562XRN2
chr2208394877208395008+intron-Distal,intron-Proximal3.446379.05502HepG2PRPF4
chr2208394894208395000+intron-Distal,intron-Proximal3.336366.76947HepG2CDC40
chr2208395557208395630+intron-Distal4.6966210.57219K562CSTF2T
chr2208395271208395366+intron-Distal3.330334.10133K562XRN2
chr2208395559208395622+intron-Distal4.780176.83513K562FMR1
chr2208395140208395187+intron-Distal3.856933.39593HepG2PRPF4
chr2208395137208395222+intron-Distal3.740007.30560HepG2NKRF
chr2208395137208395249+intron-Distal4.918418.29107HepG2XRN2
chr2208394905208395001+intron-Distal,intron-Proximal3.193853.04831K562RBM15
chr2208394898208394992+intron-Distal,intron-Proximal3.441255.72417K562METAP2
chr2208432701208432802+intron-Distal4.441194.30850HepG2QKI
chr2208395138208395192+intron-Distal3.941694.06602HepG2FAM120A
chr2208395252208395346+intron-Distal4.484895.82353HepG2XRN2
chr2208395565208395620+intron-Distal3.354103.19180HepG2CSTF2T
chr2208395131208395193+intron-Distal4.231546.36044HepG2CSTF2T
chr2208444597208444712+intron-Distal4.330323.18981K562PTBP1
chr2208395345208395403+intron-Distal4.915926.40474K562GEMIN5
chr2208394860208395007+intron-Distal,intron-Proximal4.5255916.33760K562CSTF2T
chr2208435975208436037+intron-Distal3.495804.48459HepG2XPO5
chr2208426491208426583+intron-Distal4.796805.89032HepG2QKI
chr2208394889208395018+intron-Distal,intron-Proximal3.5732310.71725HepG2CSTF2
chr2208449135208449197+intron-Distal4.294244.94901HepG2HNRNPC
chr2208394905208394972+intron-Distal,intron-Proximal3.513365.78803HepG2FAM120A
chr2208394913208394986+intron-Distal,intron-Proximal4.070805.85226K562UCHL5
chr2208447651208447747+intron-Distal3.933165.55877HepG2HNRNPL
chr2208394868208395005+intron-Distal,intron-Proximal3.3848013.45529HepG2CSTF2T
chr2208439890208439976+intron-Distal,intron-Proximal4.152834.76003K562KHSRP
chr2208395358208395422+intron-Distal4.141006.85787HepG2CSTF2T
chr2208425126208425198+intron-Distal,intron-Proximal5.027316.44303K562AQR
chr2208395553208395648+intron-Distal4.9221515.47995HepG2CSTF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CREB1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CREB1 is not available on ENCORE database.

  • 61 RBPs can affect the levels of CREB1.  








The Knockdown/knockout RNA-Seq assay for CREB1 is not available on ENCORE database.





61 RBPs can affect the gene expression of CREB1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CREB1ENSG00000118260.10867.865901035.26810-0.254502.450501.87210HepG2ACO1
CREB1ENSG00000118260.101042.347901487.35040-0.512903.642503.04320HepG2AKAP1
CREB1ENSG00000118260.10532.16200900.14250-0.758305.559704.21330HepG2BCCIP
CREB1ENSG00000118260.10990.818501628.94930-0.717209.875708.83440HepG2BOP1
CREB1ENSG00000118260.10739.065901035.15850-0.486107.537406.54240HepG2CKAP4
CREB1ENSG00000118260.101018.926101495.48670-0.553605.615904.66840HepG2CPSF6
CREB1ENSG00000118260.10803.953101081.95620-0.428504.832303.49070HepG2YBX3
CREB1ENSG00000118260.10908.697301303.18400-0.520208.215207.21870HepG2CELF1
CREB1ENSG00000118260.101166.945201401.45210-0.264203.657102.82440HepG2DAZAP1
CREB1ENSG00000118260.101026.89490825.032500.315702.340101.50760HepG2DDX24
CREB1ENSG00000118260.101136.057101424.87210-0.326802.010201.46840HepG2DDX3X
CREB1ENSG00000118260.10771.422001223.75220-0.665705.779204.91530HepG2DDX6
CREB1ENSG00000118260.10818.528401062.39210-0.376203.967503.13830HepG2DNAJC21
CREB1ENSG00000118260.10676.004701053.02230-0.6394012.6559011.37040HepG2DNAJC2
CREB1ENSG00000118260.10804.155501176.66330-0.549203.930903.23180HepG2EIF2S1
CREB1ENSG00000118260.10888.668801300.46760-0.549304.212503.42840HepG2EIF4A3
CREB1ENSG00000118260.101004.991401324.31970-0.398103.424102.52440HepG2EIF4G2
CREB1ENSG00000118260.101055.01270821.185400.361402.807902.01540HepG2FUBP3
CREB1ENSG00000118260.101296.526701695.31210-0.386902.681102.04940HepG2GPKOW
CREB1ENSG00000118260.10885.051801193.03990-0.430803.711302.91800HepG2HNRNPC
CREB1ENSG00000118260.10944.180801138.10600-0.269502.283701.62770HepG2HNRNPF
CREB1ENSG00000118260.10906.487001231.93060-0.442603.631102.83840HepG2HNRNPK
CREB1ENSG00000118260.10925.935601276.67920-0.463408.499407.37790HepG2HNRNPL
CREB1ENSG00000118260.10890.710901185.15190-0.412005.644004.80330HepG2HNRNPU
CREB1ENSG00000118260.10877.022301210.59280-0.465007.220806.09640HepG2ILF2
CREB1ENSG00000118260.101386.702202107.65450-0.604002.852402.01050HepG2LARP4
CREB1ENSG00000118260.10970.292801319.62320-0.443602.993602.34020HepG2MATR3
CREB1ENSG00000118260.101039.376601350.75430-0.378002.452401.85440HepG2NCBP2
CREB1ENSG00000118260.101074.109601389.66590-0.371603.352902.51440HepG2NOL12
CREB1ENSG00000118260.101781.269701434.499500.312302.078001.42520HepG2NSUN2
CREB1ENSG00000118260.10846.096901146.91020-0.438905.812304.98420HepG2PCBP1
CREB1ENSG00000118260.10969.533101326.49950-0.452304.765504.00930HepG2PUF60
CREB1ENSG00000118260.101149.706801408.06970-0.292504.365903.65770HepG2PUM1
CREB1ENSG00000118260.101182.011201407.08360-0.251502.205701.60420HepG2PUM2
CREB1ENSG00000118260.101438.352501209.687700.249702.549901.95460HepG2RECQL
CREB1ENSG00000118260.10600.90490808.12990-0.427501.957001.43240HepG2RPS19
CREB1ENSG00000118260.10816.306901055.42800-0.370604.576903.78260HepG2SAFB2
CREB1ENSG00000118260.10981.775001215.00340-0.307503.125002.50180HepG2SF3B4
CREB1ENSG00000118260.101878.998301653.176900.184601.960201.51700HepG2SRFBP1
CREB1ENSG00000118260.101082.165201309.64350-0.275303.122402.46310HepG2SRSF5
CREB1ENSG00000118260.10913.404001118.11520-0.291702.563901.89210HepG2SRSF7
CREB1ENSG00000118260.101156.764201576.75160-0.446904.084103.22340HepG2TARDBP
CREB1ENSG00000118260.10723.385801151.58230-0.670809.644708.80950HepG2TIAL1
CREB1ENSG00000118260.10665.878101161.89190-0.8031017.9234016.65160HepG2TRIM56
CREB1ENSG00000118260.10329.65220520.52410-0.659004.479303.51280HepG2UCHL5
CREB1ENSG00000118260.101210.544501391.89850-0.201401.985501.37760HepG2UPF1
CREB1ENSG00000118260.101083.568801343.82780-0.310603.643202.97200HepG2UTP3
CREB1ENSG00000118260.10621.19430867.30480-0.481502.619101.91370HepG2XRN2
CREB1ENSG00000118260.101289.066701530.82600-0.248003.211302.63570HepG2ZNF622
CREB1ENSG00000118260.101045.808601253.44530-0.261302.418501.88210K562AGGF1
CREB1ENSG00000118260.10992.309301304.26800-0.394403.333702.61570K562AKAP8L
CREB1ENSG00000118260.10811.413401104.30170-0.444603.644702.98940K562AQR
CREB1ENSG00000118260.10945.612201190.90800-0.332702.720101.94340K562CPSF6
CREB1ENSG00000118260.10353.25510525.11410-0.571904.597803.18430K562CSTF2
CREB1ENSG00000118260.10505.54270642.52810-0.345902.352601.39530K562DDX3X
CREB1ENSG00000118260.10428.06910585.94270-0.452903.576302.08010K562EWSR1
CREB1ENSG00000118260.101028.60530694.061800.567503.874203.00470K562G3BP2
CREB1ENSG00000118260.10834.810801208.62210-0.533805.771904.67580K562GRSF1
CREB1ENSG00000118260.10828.403201109.86380-0.422003.723502.69700K562METAP2
CREB1ENSG00000118260.10892.218201378.12440-0.627204.471503.39280K562PPIG
CREB1ENSG00000118260.10636.06890861.29210-0.437304.002503.21810K562PTBP1
CREB1ENSG00000118260.102115.937701682.951400.330203.650402.41400K562PUM1
CREB1ENSG00000118260.10587.69070826.04290-0.491204.160503.10510K562RBM22
CREB1ENSG00000118260.10564.03240721.78370-0.355802.682501.84190K562SF3B4
CREB1ENSG00000118260.10918.865401087.06670-0.242502.305701.44310K562SRPK2
CREB1ENSG00000118260.10672.05920854.57990-0.346602.200801.56550K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CREB1 is not available on ENCORE database.





4 RBPs can affect the splicing of CREB1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECREB1ENSG00000118260.10chr2+2084258422084258842084249492084250962084321862084322870.232000.004180.08381includedHepG2HNRNPK
SECREB1ENSG00000118260.10chr2+2084258422084258842084249492084250962084321862084322870.266000.001030.04389includedHepG2MATR3
SECREB1ENSG00000118260.10chr2+208425842208425884208424949208425096208432186208432287-0.296000.000310.01193excludedHepG2SF3A3
SECREB1ENSG00000118260.10chr2+2084418332084419482084399952084401782084422282084423790.105000.000470.03531includedHepG2SRSF9

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CREB1 is not avaliable on ENCORE database.