COQ9

General Information

Gene Name       : COQ9
Gene ID             : ENSG00000088682.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: COQ9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878COQ9ENSG00000088682.1335.2638.4636.86ENCSR000AEF
HepG2COQ9ENSG00000088682.1364.5052.9758.73ENCSR985KAT
K562COQ9ENSG00000088682.1366.4673.6970.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for COQ9 is not avaliable on ENCORE database.



Proteins bound to RNA
  • COQ9 RNA is bound by 14 proteins.  







eCLIP assay for COQ9 is not avaliable on ENCORE database.





14 proteins are bound to COQ9 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr165749480757494877+3'-UTR,intron-Distal3.881553.01428K562UCHL5
chr165749391957493995+3'-UTR,CDS,intron-Distal,intron-Proximal5.197029.77805HepG2SF3B4
chr165749482857494928+3'-UTR,intron-Distal3.308483.92010K562DDX55
chr165749461757494704+3'-UTR,intron-Distal3.147833.81856K562IGF2BP1
chr165749470557494776+3'-UTR,intron-Distal4.002193.73331K562RBM15
chr165749472357494784+3'-UTR,intron-Distal3.253093.19398HepG2XPO5
chr165749395457494063+3'-UTR,CDS,intron-Distal,intron-Proximal3.091799.84866HepG2PRPF8
chr165749351757493645+3'-UTR,CDS,intron-Distal,intron-Proximal5.351838.55457HepG2PPIG
chr165749393657494066+3'-UTR,CDS,intron-Distal,intron-Proximal4.215046.92290HepG2AQR
chr165748495057485057+5'-UTR,CDS,intron-Proximal3.4480714.93330K562DDX3X
chr165748684757486908+5'-UTR,CDS,intron-Proximal4.492045.93840HepG2PRPF8
chr165748139357481491+5'-UTR,CDS,intron-Proximal3.881545.22400HepG2DDX3X
chr165748495057485025+5'-UTR,CDS,intron-Proximal3.927205.01580HepG2DDX3X
chr165748499357485109+5'-UTR,CDS3.124043.40321HepG2GRWD1
chr165748138057481490+5'-UTR,CDS4.3792211.03053K562DDX3X
chr165748676057486883+5'-UTR,CDS,intron-Proximal4.495615.80295HepG2PPIG
chr165749401557494060+CDS,intron-Distal,intron-Proximal5.066316.75320K562AQR
chr165748148057481605+CDS,intron-Distal,intron-Proximal3.252243.90917HepG2PRPF4
chr165749084057490902+CDS,intron-Distal,intron-Proximal3.731425.58370HepG2PPIG
chr165749048557490520+CDS,intron-Distal3.094214.97511K562YBX3
chr165749048557490560+CDS,intron-Distal,intron-Proximal3.162323.66193HepG2PPIG
chr165749090257490955+CDS,intron-Distal,intron-Proximal3.343744.24993HepG2PPIG
chr165748226657482321+intron-Distal3.065263.26837HepG2HNRNPC
chr165749363757493687+intron-Distal,intron-Proximal5.049854.65563K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for COQ9 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for COQ9 is not available on ENCORE database.

  • 74 RBPs can affect the levels of COQ9.  








The Knockdown/knockout RNA-Seq assay for COQ9 is not available on ENCORE database.





74 RBPs can affect the gene expression of COQ9 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
COQ9ENSG00000088682.91743.899301181.392200.561704.701303.50040HepG2ABCF1
COQ9ENSG00000088682.91101.55940876.598600.329502.035601.35820HepG2ASCC1
COQ9ENSG00000088682.9927.387701183.17230-0.351403.882603.09500HepG2AUH
COQ9ENSG00000088682.9818.849501101.66720-0.428003.520502.85460HepG2BOP1
COQ9ENSG00000088682.9708.97310498.417600.508302.317801.62120HepG2CNOT7
COQ9ENSG00000088682.9730.904301011.40040-0.468603.664402.88380HepG2CPSF6
COQ9ENSG00000088682.91349.351701083.363900.316604.368203.47080HepG2DAZAP1
COQ9ENSG00000088682.9962.40050779.385200.304203.312602.40850HepG2DDX19B
COQ9ENSG00000088682.9952.54320620.139800.619103.307401.90740HepG2DDX27
COQ9ENSG00000088682.91410.060801014.876700.474403.833103.10840HepG2DDX3X
COQ9ENSG00000088682.9360.29290662.96030-0.879804.256003.31860HepG2DDX55
COQ9ENSG00000088682.91239.59960871.738000.507803.724103.01690HepG2DDX6
COQ9ENSG00000088682.9859.00490717.579300.259402.416501.80030HepG2DNAJC2
COQ9ENSG00000088682.91012.29950756.715000.419702.842901.91070HepG2EEF2
COQ9ENSG00000088682.9296.84100660.05710-1.1529011.469109.38650HepG2AGO1
COQ9ENSG00000088682.91198.49100926.211600.371702.235801.65920HepG2EIF4A3
COQ9ENSG00000088682.9492.52310901.74020-0.872506.978705.91570HepG2EIF4B
COQ9ENSG00000088682.91347.257401023.959400.395803.448402.54720HepG2EIF4G2
COQ9ENSG00000088682.9942.810501358.47470-0.526909.378208.37940HepG2ETF1
COQ9ENSG00000088682.9869.69440682.848900.348802.603101.48900HepG2FASTKD2
COQ9ENSG00000088682.9590.21550804.53200-0.446903.891202.74740HepG2HDGF
COQ9ENSG00000088682.9544.16980995.72350-0.8717016.0749014.20740HepG2HNRNPA2B1
COQ9ENSG00000088682.9554.71790812.98520-0.551504.726503.83690HepG2HNRNPC
COQ9ENSG00000088682.9506.50840807.60970-0.6731010.578809.45720HepG2HNRNPU
COQ9ENSG00000088682.9680.69540970.02690-0.511003.136201.81710HepG2HSPD1
COQ9ENSG00000088682.9605.82680856.90730-0.500203.553502.74110HepG2PABPC4
COQ9ENSG00000088682.9667.74540446.954100.579102.894701.33560HepG2PNPT1
COQ9ENSG00000088682.9692.97960888.93980-0.359303.631502.75590HepG2PRPF4
COQ9ENSG00000088682.9539.091101025.53160-0.9278013.5993012.41420HepG2PUF60
COQ9ENSG00000088682.9782.483501088.70160-0.476504.118903.42640HepG2PUM1
COQ9ENSG00000088682.9687.154901087.87250-0.662808.652507.49640HepG2PUM2
COQ9ENSG00000088682.9583.185501063.17920-0.8664014.8025013.51910HepG2QKI
COQ9ENSG00000088682.9604.008001135.42630-0.9106017.6045016.52840HepG2RBM22
COQ9ENSG00000088682.9599.30970964.90120-0.687108.442907.31420HepG2RBM25
COQ9ENSG00000088682.9806.333101092.50720-0.438205.337104.62520HepG2NELFE
COQ9ENSG00000088682.9691.670501017.51780-0.556907.917506.95360HepG2RECQL
COQ9ENSG00000088682.9528.56420730.52790-0.466902.217301.37060HepG2RPS10
COQ9ENSG00000088682.9825.76880599.857200.461003.335702.29960HepG2SERBP1
COQ9ENSG00000088682.9483.966101205.03160-1.3161013.9155012.18470HepG2SNRNP70
COQ9ENSG00000088682.9845.008101282.40950-0.6018010.8838010.06770HepG2SRFBP1
COQ9ENSG00000088682.9799.073501066.79750-0.416905.039704.45100HepG2SRSF1
COQ9ENSG00000088682.9895.443101106.61410-0.305503.518702.74770HepG2SRSF7
COQ9ENSG00000088682.91478.228601113.412800.408806.143905.43520HepG2SSB
COQ9ENSG00000088682.91358.70100978.542600.473402.885801.52820HepG2SUGP2
COQ9ENSG00000088682.9608.93310958.87360-0.655109.393208.45860HepG2TAF15
COQ9ENSG00000088682.91110.79860784.720100.501204.087603.50510HepG2TIAL1
COQ9ENSG00000088682.9568.38640817.77400-0.524802.941301.84650HepG2XRCC6
COQ9ENSG00000088682.91024.09700877.279600.223101.960101.37950HepG2ZC3H8
COQ9ENSG00000088682.91403.536701131.033900.311304.439703.78950HepG2ZNF622
COQ9ENSG00000088682.9537.10250743.00120-0.468202.546801.30820HepG2ZRANB2
COQ9ENSG00000088682.9893.615201760.39930-0.9782016.4546015.18200K562AQR
COQ9ENSG00000088682.9822.103401383.91840-0.751409.255307.60910K562BOP1
COQ9ENSG00000088682.91092.396401471.49680-0.429804.549803.54510K562CPSF6
COQ9ENSG00000088682.9670.69280942.77770-0.491304.244903.09700K562EFTUD2
COQ9ENSG00000088682.9752.212601009.28450-0.424102.559601.56800K562EIF3D
COQ9ENSG00000088682.91130.501001497.22390-0.405303.487602.52360K562FMR1
COQ9ENSG00000088682.9904.237701269.03700-0.489004.060602.93720K562FTO
COQ9ENSG00000088682.9481.50740680.01770-0.498002.800202.08680K562G3BP2
COQ9ENSG00000088682.91077.108201404.91280-0.383303.345502.47410K562GPKOW
COQ9ENSG00000088682.9841.518801319.85570-0.649308.614907.61370K562HNRNPC
COQ9ENSG00000088682.9832.190501384.40250-0.7343011.286908.07690K562HNRNPH1
COQ9ENSG00000088682.91662.110201280.084600.376702.612201.71050K562HNRNPM
COQ9ENSG00000088682.9952.459501518.94420-0.673309.692708.03680K562HNRNPU
COQ9ENSG00000088682.9598.22420872.86740-0.545104.456602.57230K562KHDRBS1
COQ9ENSG00000088682.91309.617101622.14670-0.308804.015403.05660K562MTPAP
COQ9ENSG00000088682.91504.011401802.38810-0.261104.080703.19420K562NSUN2
COQ9ENSG00000088682.9586.79830864.00470-0.558205.177903.82800K562PCBP2
COQ9ENSG00000088682.92224.298501766.715700.332202.738301.92150K562PPIG
COQ9ENSG00000088682.9589.52830917.43490-0.638006.034204.92580K562PRPF8
COQ9ENSG00000088682.91761.639202720.46080-0.626908.635207.18250K562PUF60
COQ9ENSG00000088682.92261.921602893.64300-0.355304.237302.89490K562PUM1
COQ9ENSG00000088682.92280.537902835.19100-0.314104.155902.97160K562PUM2
COQ9ENSG00000088682.91050.832401377.22120-0.390202.733402.19290K562PUS1
COQ9ENSG00000088682.9968.24460706.506000.454603.128802.05610K562RPS3
COQ9ENSG00000088682.9941.097501336.13830-0.505704.034502.84740K562SF3B1
COQ9ENSG00000088682.9874.269201355.71910-0.632902.592801.42020K562SNRNP200
COQ9ENSG00000088682.91440.441501867.67490-0.374702.809301.54720K562STAU1
COQ9ENSG00000088682.9728.40490936.12950-0.362002.478001.80620K562TARDBP
COQ9ENSG00000088682.9937.452901209.44520-0.367502.903601.93150K562TRIM56
COQ9ENSG00000088682.91576.025801911.10740-0.278103.692002.87170K562UPF1
COQ9ENSG00000088682.91351.472001635.27910-0.275002.269801.47660K562WDR3
COQ9ENSG00000088682.91584.486801983.08850-0.323702.792601.92450K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for COQ9 is not available on ENCORE database.





7 RBPs can affect the splicing of COQ9 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECOQ9ENSG00000088682.9chr16+574938325749401657493476574936325749450057495154-0.074000.003550.05695excludedK562SF3B4
SECOQ9ENSG00000088682.9chr16+574921575749226257490842574909275749347657493632-0.201000.000000.00000excludedHepG2U2AF1
SECOQ9ENSG00000088682.9chr16+574921575749226257490842574909275749347657493632-0.102000.001070.01489excludedHepG2U2AF2
SECOQ9ENSG00000088682.9chr16+574921575749226257490842574909275749347657493632-0.098000.006190.08499excludedK562U2AF2
SECOQ9ENSG00000088682.9chr16+574904155749055857486712574868485749215757492262-0.119000.003720.05501excludedK562HNRNPC
A5SSCOQ9ENSG00000088682.9chr16+5749215757492389574921575749226257493476574936320.092000.000010.00022longerK562AQR
A5SSCOQ9ENSG00000088682.9chr16+5748147157481603574814715748149057484951574851200.072000.000250.00587longerK562AQR
A5SSCOQ9ENSG00000088682.9chr16+5749215757492389574921575749226257493476574936320.123000.000000.00059longerHepG2RBM22
A5SSCOQ9ENSG00000088682.9chr16+5748139357481603574813935748149057484951574851200.115000.000590.05270longerHepG2RBM22
MXECOQ9ENSG00000088682.9chr16+5749084257490927574921575749226257490415574905585749347657493632-0.178000.000110.006402includedK562DHX30

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for COQ9 is not avaliable on ENCORE database.