CLDN15

General Information

Gene Name       : CLDN15
Gene ID             : ENSG00000106404.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CLDN15)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CLDN15ENSG00000106404.132.444.763.60ENCSR000AEF
HepG2CLDN15ENSG00000106404.139.544.617.07ENCSR985KAT
K562CLDN15ENSG00000106404.138.036.847.43ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CLDN15 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CLDN15 RNA is bound by 10 proteins.  







eCLIP assay for CLDN15 is not avaliable on ENCORE database.





10 proteins are bound to CLDN15 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7100875422100875478-3'-UTR,intron-Distal3.690134.14074K562UPF1
chr7100881409100881541-5'-UTR,intron-Distal4.585265.78562K562HNRNPK
chr7100881202100881260-5'-UTR,intron-Distal,intron-Proximal4.430964.08604HepG2PPIG
chr7100881304100881429-5'-UTR,intron-Distal,intron-Proximal4.775525.07733HepG2PTBP1
chr7100880989100881053-5'-UTR,intron-Distal,intron-Proximal3.871793.44758HepG2CSTF2T
chr7100881325100881378-5'-UTR,intron-Distal,intron-Proximal4.084375.99105K562UPF1
chr7100881301100881351-5'-UTR,intron-Distal,intron-Proximal3.571644.25479HepG2PCBP2
chr7100880976100881039-5'-UTR,intron-Distal,intron-Proximal3.824265.24452HepG2PPIG
chr7100881258100881419-5'-UTR,intron-Distal,intron-Proximal3.490137.98280K562PTBP1
chr7100877386100877459-CDS,intron-Distal,intron-Proximal3.603985.98058HepG2RBFOX2
chr7100877508100877567-CDS,intron-Distal,intron-Proximal3.205636.41278HepG2PRPF8
chr7100877511100877565-CDS,intron-Distal,intron-Proximal4.176913.12843K562PRPF8
chr7100877496100877560-CDS,intron-Distal,intron-Proximal5.264276.75320K562AQR
chr7100878002100878123-intron-Distal4.387285.59467HepG2PRPF4
chr7100880571100880623-intron-Distal,intron-Proximal3.797603.19526HepG2CSTF2T
chr7100878788100878841-intron-Distal3.297603.69530HepG2CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CLDN15 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CLDN15 is not available on ENCORE database.

  • 81 RBPs can affect the levels of CLDN15.  








The Knockdown/knockout RNA-Seq assay for CLDN15 is not available on ENCORE database.





81 RBPs can affect the gene expression of CLDN15 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CLDN15ENSG00000106404.970.72870246.04530-1.7986011.3807010.37280HepG2AKAP1
CLDN15ENSG00000106404.9313.68930203.565900.623703.142002.30420HepG2ASCC1
CLDN15ENSG00000106404.9305.27600148.604901.038507.637306.70350HepG2BOP1
CLDN15ENSG00000106404.9366.82800259.058800.501703.694302.94580HepG2CKAP4
CLDN15ENSG00000106404.9229.00330157.866000.536602.257101.63640HepG2DDX21
CLDN15ENSG00000106404.9256.69830166.056500.628303.621802.89420HepG2DNAJC2
CLDN15ENSG00000106404.9417.70750215.021400.957907.155206.12800HepG2EIF4A3
CLDN15ENSG00000106404.9678.89990353.672500.9407013.7354012.56020HepG2ETF1
CLDN15ENSG00000106404.9317.19250201.297700.655903.452802.71330HepG2G3BP1
CLDN15ENSG00000106404.9334.29470154.628201.112207.835706.79400HepG2GPKOW
CLDN15ENSG00000106404.9175.02550247.37990-0.499202.772401.79590HepG2HDGF
CLDN15ENSG00000106404.9306.75790169.094600.859205.666204.78470HepG2HNRNPA1
CLDN15ENSG00000106404.9335.35090188.101700.834103.940703.12370HepG2HNRNPC
CLDN15ENSG00000106404.9304.08030211.928900.520802.946602.20740HepG2HNRNPF
CLDN15ENSG00000106404.9444.06890203.975601.1223010.364609.08950HepG2HNRNPK
CLDN15ENSG00000106404.9140.04510240.64570-0.781004.984504.09990HepG2HNRNPL
CLDN15ENSG00000106404.9284.77490147.566000.948405.748704.87480HepG2HNRNPLL
CLDN15ENSG00000106404.9299.13280186.857000.678805.069404.26890HepG2HNRNPU
CLDN15ENSG00000106404.9341.04490208.687000.708504.859103.92520HepG2IGF2BP1
CLDN15ENSG00000106404.9379.73230204.592800.892104.263503.44220HepG2IGF2BP2
CLDN15ENSG00000106404.9355.53240217.140800.711304.133503.33480HepG2MAGOH
CLDN15ENSG00000106404.9147.43690218.33710-0.566502.035001.48910HepG2MATR3
CLDN15ENSG00000106404.9115.71750198.07670-0.775502.379801.40070HepG2METAP2
CLDN15ENSG00000106404.9425.06310244.667500.796803.983802.90590HepG2PABPC1
CLDN15ENSG00000106404.9347.51740198.938900.804705.151604.17840HepG2PABPC4
CLDN15ENSG00000106404.9222.51720135.197100.718802.649501.85810HepG2PRPF8
CLDN15ENSG00000106404.9163.86310229.53450-0.486202.299601.79190HepG2PTBP1
CLDN15ENSG00000106404.9436.35920250.093600.802907.130306.22870HepG2PUF60
CLDN15ENSG00000106404.9367.45710248.602200.563603.502202.81090HepG2QKI
CLDN15ENSG00000106404.964.19360154.97180-1.271504.653803.75230HepG2RAVER1
CLDN15ENSG00000106404.9153.34660225.61840-0.557102.495101.85100HepG2RBM25
CLDN15ENSG00000106404.9329.82910237.913200.471202.637502.03390HepG2RECQL
CLDN15ENSG00000106404.9373.90840228.337200.711404.620603.76890HepG2RPLP0
CLDN15ENSG00000106404.9238.2094078.250201.606004.931603.01570HepG2SF1
CLDN15ENSG00000106404.9270.11380146.051800.887005.177804.23520HepG2SF3B1
CLDN15ENSG00000106404.9373.19410238.984000.642904.684103.94560HepG2SF3B4
CLDN15ENSG00000106404.9153.9437069.937801.138202.673701.39320HepG2SNRNP200
CLDN15ENSG00000106404.990.09750162.51160-0.851002.783502.00070HepG2SNRNP70
CLDN15ENSG00000106404.9137.76430249.44390-0.856505.446904.83990HepG2SRSF1
CLDN15ENSG00000106404.9168.99480246.95010-0.547202.660502.04380HepG2SRSF5
CLDN15ENSG00000106404.9304.75410208.221900.549403.204802.46190HepG2SRSF7
CLDN15ENSG00000106404.9157.36250224.19980-0.510702.343701.82080HepG2TAF15
CLDN15ENSG00000106404.9206.92830143.874200.524201.946101.32430HepG2TARDBP
CLDN15ENSG00000106404.9397.93850181.509101.132406.581105.87030HepG2TIAL1
CLDN15ENSG00000106404.9293.94070183.193200.682105.101604.38310HepG2TRIM56
CLDN15ENSG00000106404.9445.77440307.270300.536702.797602.16620HepG2U2AF1
CLDN15ENSG00000106404.9228.8520081.346901.492204.248903.01290HepG2U2AF2
CLDN15ENSG00000106404.9157.93480103.096000.615201.947701.31100HepG2UCHL5
CLDN15ENSG00000106404.9288.95020171.827500.749803.142302.37130HepG2XRN2
CLDN15ENSG00000106404.9415.39430248.950100.738507.477606.46210HepG2ZC3H8
CLDN15ENSG00000106404.9336.54280563.47120-0.743608.262707.35470K562AGGF1
CLDN15ENSG00000106404.9457.31310586.31640-0.358502.096101.52480K562AKAP8L
CLDN15ENSG00000106404.9618.29220461.080900.423202.860201.59850K562APOBEC3C
CLDN15ENSG00000106404.91988.17450472.653102.0725065.8707063.36460K562AQR
CLDN15ENSG00000106404.9410.19810280.138300.550103.591102.35530K562CCAR1
CLDN15ENSG00000106404.9353.70240498.86420-0.496103.715601.94380K562CEBPZ
CLDN15ENSG00000106404.9597.83050306.019100.966006.097304.46540K562CNOT7
CLDN15ENSG00000106404.9394.19430241.011300.709704.632403.43620K562EFTUD2
CLDN15ENSG00000106404.9384.00990258.000300.573702.881501.82520K562EIF3D
CLDN15ENSG00000106404.9597.94220206.845601.5314011.369109.67710K562EIF4A3
CLDN15ENSG00000106404.9581.24820418.564300.473603.267702.34270K562FIP1L1
CLDN15ENSG00000106404.9498.80720354.376600.493103.028202.13090K562FMR1
CLDN15ENSG00000106404.9425.53020215.112200.9841010.914609.79830K562FXR1
CLDN15ENSG00000106404.945.89640115.06810-1.326005.137004.10610K562G3BP2
CLDN15ENSG00000106404.9537.47940332.442100.693004.699303.66900K562GPKOW
CLDN15ENSG00000106404.9912.48390284.551701.6810035.7193033.65280K562HNRNPC
CLDN15ENSG00000106404.9460.70790352.709300.385302.509401.65800K562HNRNPU
CLDN15ENSG00000106404.9451.78280622.23150-0.461802.749001.92600K562KIF1C
CLDN15ENSG00000106404.9353.67630172.513101.035609.732708.09470K562MAGOH
CLDN15ENSG00000106404.9277.78030172.153500.690104.416203.22560K562MATR3
CLDN15ENSG00000106404.9469.82150697.05600-0.569205.185203.85950K562MBNL1
CLDN15ENSG00000106404.9440.19560324.512100.439802.590801.74780K562METAP2
CLDN15ENSG00000106404.9531.64880387.913200.454602.052101.35060K562MTPAP
CLDN15ENSG00000106404.9496.04470293.997400.754603.944002.44870K562PABPC1
CLDN15ENSG00000106404.9112.74740167.61200-0.572002.346901.72820K562PTBP1
CLDN15ENSG00000106404.91343.88550570.135801.2369013.5536011.73520K562PUF60
CLDN15ENSG00000106404.9775.78810594.177700.384703.061102.05450K562PUM2
CLDN15ENSG00000106404.9363.60350581.47180-0.677305.533804.79720K562PUS1
CLDN15ENSG00000106404.9448.83480566.55100-0.336002.107701.57670K562RBM15
CLDN15ENSG00000106404.9313.57340160.685200.964507.722906.22730K562RBM22
CLDN15ENSG00000106404.946.21390109.08400-1.239004.785302.95550K562RBM25
CLDN15ENSG00000106404.9324.34220185.413100.806704.272702.99750K562RPS3
CLDN15ENSG00000106404.9512.20500278.803600.877403.838701.96870K562SBDS
CLDN15ENSG00000106404.9496.34460245.215701.017203.614202.17870K562SF1
CLDN15ENSG00000106404.9542.34320316.263300.778003.273502.21330K562SF3B1
CLDN15ENSG00000106404.9278.31840119.595101.2185011.254809.46470K562SF3B4
CLDN15ENSG00000106404.9618.74660298.805701.050004.890702.96570K562SFPQ
CLDN15ENSG00000106404.9547.63470281.764000.958602.423501.30620K562SNRNP200
CLDN15ENSG00000106404.9636.88240435.683400.547605.889304.59120K562SRPK2
CLDN15ENSG00000106404.9272.40490179.006700.605602.904101.81650K562SRSF4
CLDN15ENSG00000106404.9110.37860177.45470-0.685002.929701.60610K562SSB
CLDN15ENSG00000106404.9697.70130497.444700.488003.971202.18040K562SUCLG1
CLDN15ENSG00000106404.9412.92360166.290001.3121014.2816012.42820K562TARDBP
CLDN15ENSG00000106404.9321.92720160.409601.004908.548206.99610K562TIA1
CLDN15ENSG00000106404.9468.90690245.393200.934107.915806.26470K562TIAL1
CLDN15ENSG00000106404.9415.50790260.704700.672404.642003.34340K562TRIM56
CLDN15ENSG00000106404.9475.59340624.90280-0.393902.984601.66650K562TROVE2
CLDN15ENSG00000106404.9206.69550115.150900.843904.836503.77730K562U2AF2
CLDN15ENSG00000106404.9793.94190457.063900.7965012.6042011.20810K562UPF1
CLDN15ENSG00000106404.9592.99430406.648500.544105.284304.15130K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CLDN15 is not available on ENCORE database.





1 RBPs can affect the splicing of CLDN15 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSCLDN15ENSG00000106404.9chr7-1008761131008762761008761131008761951008775581008777120.356000.000250.00199longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CLDN15 is not avaliable on ENCORE database.