CCDC91

General Information

Gene Name       : CCDC91
Gene ID             : ENSG00000123106.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CCDC91)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CCDC91ENSG00000123106.1014.7311.7213.23ENCSR000AEF
HepG2CCDC91ENSG00000123106.103.997.625.80ENCSR985KAT
K562CCDC91ENSG00000123106.1017.3620.2718.81ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CCDC91 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CCDC91 RNA is bound by 22 proteins.  







eCLIP assay for CCDC91 is not avaliable on ENCORE database.





22 proteins are bound to CCDC91 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr122860546528605525+3'-UTR,CDS4.248653.87582K562ZNF622
chr122860547628605578+3'-UTR,CDS,polyA_site3.400533.73423K562UCHL5
chr122845852028458587+5'-UTR,CDS,intron-Distal,intron-Proximal5.2682110.03191K562SF3B4
chr122845974228459816+5'-UTR,CDS,intron-Distal3.907133.63655K562IGF2BP2
chr122834345828343627+5'-UTR,intron-Distal,intron-Proximal3.486445.62613K562FUS
chr122845974728459824+5'-UTR,CDS,intron-Distal4.611845.23259HepG2BCLAF1
chr122845968128459828+5'-UTR,CDS,intron-Distal3.173815.75243K562ZNF622
chr122837874528378776+5'-UTR,intron-Distal3.504958.43159K562YBX3
chr122837877628378795+5'-UTR,intron-Distal,intron-Proximal4.219593.43253K562YBX3
chr122834349228343576+5'-UTR,intron-Distal,intron-Proximal3.482364.06757K562UCHL5
chr122851537028515417+5'-UTR,CDS,intron-Distal,intron-Proximal3.498273.36945K562ZNF622
chr122834348828343558+5'-UTR,intron-Distal3.887597.63469K562DDX3X
chr122834339328343477+5'-UTR,intron-Distal3.673415.36773HepG2NCBP2
chr122841229428412304+CDS,intron-Distal,intron-Proximal3.866656.31765K562LIN28B
chr122841230428412364+CDS,intron-Distal3.651547.89700K562LIN28B
chr122841015328410180+CDS,intron-Distal,intron-Proximal3.693865.37494K562LIN28B
chr122834592628346011+intron-Distal4.309075.41654K562KHSRP
chr122834842228348518+intron-Distal4.102143.34098HepG2HNRNPM
chr122834358128343737+intron-Distal,intron-Proximal4.230767.94890K562XRN2
chr122841853328418627+intron-Distal3.357863.81193HepG2QKI
chr122841853028418611+intron-Distal5.108888.50955K562QKI
chr122837173128371793+intron-Distal4.271575.46313K562KHSRP
chr122839250928392566+intron-Distal4.326885.41654K562KHSRP
chr122844098328440998+intron-Distal4.8074711.90186K562EXOSC5
chr122851441528514458+intron-Distal4.685565.05386K562PTBP1
chr122839247828392507+intron-Distal4.046344.54401K562KHSRP
chr122841563428415685+intron-Distal3.966228.17387K562KHSRP
chr122844644928446549+intron-Distal3.180586.18396K562KHSRP
chr122867124128671287+intron-Distal4.053573.01456K562EXOSC5
chr122846107328461176+intron-Distal4.102044.93238K562QKI
chr122842361728423690+intron-Distal3.189043.68839K562KHSRP
chr122844053428440576+intron-Distal4.846057.06134K562EXOSC5
chr122841568528415739+intron-Distal3.853477.12499K562KHSRP
chr122834763628347771+intron-Distal5.6714112.32763K562HNRNPM
chr122840569428405743+intron-Distal4.320743.98115K562MATR3
chr122840879328408859+intron-Distal3.192383.42396HepG2U2AF2
chr122845331828453382+intron-Distal4.593916.93191K562KHSRP
chr122857475928574842+intron-Distal4.693544.67693K562PTBP1
chr122844119028441225+intron-Distal4.752596.41216K562EXOSC5
chr122840172528401761+intron-Distal3.546024.61337K562EXOSC5
chr122834678728346808+intron-Distal4.276054.54401K562KHSRP
chr122842047328420556+intron-Distal6.3617316.35513K562QKI
chr122844158828441644+intron-Distal4.6351911.25776K562EXOSC5
chr122842981528429882+intron-Distal4.450406.28383K562KHSRP
chr122842552628425580+intron-Distal4.359094.12401HepG2U2AF2
chr122842200728422093+intron-Distal3.758715.56048K562KHSRP
chr122840482428404890+intron-Distal4.174444.05620HepG2MATR3
chr122844176828441809+intron-Distal4.343557.31365K562EXOSC5
chr122838921328389277+intron-Distal3.758715.56048K562KHSRP
chr122850926428509308+intron-Distal3.410703.43875K562EXOSC5
chr122843681628436955+intron-Distal5.9848915.32150K562EXOSC5
chr122843347928433548+intron-Distal3.829653.06150K562KHSRP
chr122867225428672367+intron-Distal4.249733.59917K562EXOSC5
chr122845781528457894+intron-Distal4.055255.67291HepG2U2AF2
chr122845320728453304+intron-Distal5.267116.23225K562QKI
chr122850829828508379+intron-Distal4.385064.48560K562EXOSC5
chr122845300828453093+intron-Distal3.281115.17040K562KHSRP
chr122843119628431315+intron-Distal5.7188510.44241K562PTBP1
chr122837451128374558+intron-Distal3.355673.79878K562MATR3
chr122834683228346889+intron-Distal3.385547.22523K562KHSRP
chr122855732928557486+intron-Distal4.381214.28663HepG2SUGP2
chr122837453328374622+intron-Distal3.920217.29258HepG2SUGP2
chr122834681328346832+intron-Distal5.049067.83372K562KHSRP
chr122835066428350722+intron-Distal4.678887.00634K562KHSRP
chr122838959628389678+intron-Distal4.225114.54401K562KHSRP
chr122845383428453890+intron-Distal4.042234.10688K562KHSRP
chr122839265328392716+intron-Distal3.663363.06150K562KHSRP
chr122841551928415596+intron-Distal5.045829.93832K562KHSRP
chr122844201628442052+intron-Distal5.4107010.67022K562EXOSC5
chr122840606428406193+intron-Distal5.2994610.33470HepG2SUGP2
chr122840550028405547+intron-Distal3.960803.23532K562MATR3
chr122840222228402309+intron-Distal4.775055.12361K562EXOSC5
chr122837991628379993+intron-Distal4.122294.36036HepG2SUGP2
chr122845370828453747+intron-Distal4.223514.10688K562KHSRP
chr122837507828375132+intron-Distal4.199934.28663HepG2SUGP2
chr122843118528431273+intron-Distal4.472104.74221HepG2PTBP1
chr122844209628442133+intron-Distal4.9360112.87307K562EXOSC5
chr122838913928389210+intron-Distal4.686516.51328K562KHSRP
chr122844253228442563+intron-Distal4.105226.41110K562EXOSC5
chr122843120128431277+intron-Distal4.189233.62025K562MATR3
chr122850952328509565+intron-Distal4.385064.48623K562EXOSC5
chr122840624128406365+intron-Distal3.414775.35016HepG2SUGP2
chr122850802428508076+intron-Distal3.524603.27944K562PTBP1
chr122844215328442192+intron-Distal5.208508.36828K562EXOSC5
chr122844059428440638+intron-Distal4.196273.30696K562EXOSC5
chr122858845428588641+intron-Distal3.101503.10883HepG2SUGP2
chr122850944028509495+intron-Distal4.696275.12432K562EXOSC5
chr122834360928343668+intron-Distal,intron-Proximal5.851526.00513K562AATF
chr122835164928351687+intron-Distal3.745613.26999K562KHSRP
chr122845447828454523+intron-Distal3.173743.28806K562KHSRP
chr122842970528429801+intron-Distal3.363884.70224K562KHSRP
chr122845848728458554+intron-Distal,intron-Proximal4.059376.39777K562PTBP1
chr122840063228400720+intron-Distal4.343703.29197K562HNRNPM
chr122843806728438153+intron-Distal3.957253.01456K562EXOSC5
chr122841545328415519+intron-Distal3.527655.40624K562KHSRP
chr122845269328452761+intron-Distal4.778536.94732K562KHSRP
chr122842049328420554+intron-Distal4.645024.51735HepG2QKI
chr122843648228436535+intron-Distal4.743985.76606K562EXOSC5
chr122837544728375488+intron-Distal3.985843.79098HepG2SUGP2
chr122844263828442681+intron-Distal5.083027.38693K562EXOSC5
chr122843776828437822+intron-Distal4.542215.12432K562EXOSC5
chr122838038228380437+intron-Distal4.330323.55787K562PTBP1
chr122838011128380196+intron-Distal3.457214.84410HepG2SUGP2
chr122835293228353017+intron-Distal4.481715.32928K562MATR3
chr122845631828456381+intron-Distal3.273444.59863HepG2PTBP1
chr122844189028441916+intron-Distal4.873096.73640K562EXOSC5
chr122835032328350419+intron-Distal3.038486.28940K562KHSRP
chr122843671528436750+intron-Distal4.214543.89080K562EXOSC5
chr122840866028408749+intron-Distal,intron-Proximal4.2518010.34114K562KHSRP
chr122843337428433478+intron-Distal4.865207.83372K562KHSRP
chr122856326328563362+intron-Distal3.521324.70224K562KHSRP
chr122834570428345789+intron-Distal3.052685.42536K562KHSRP
chr122834586428345926+intron-Distal3.132514.10408K562KHSRP
chr122839242628392478+intron-Distal3.001243.48890K562KHSRP
chr122835296028353017+intron-Distal5.259766.57566K562PTBP1
chr122855581828555922+intron-Distal3.677544.61337K562EXOSC5
chr122844245328442483+intron-Distal5.236739.02315K562EXOSC5
chr122842988228429937+intron-Distal4.270074.96658K562KHSRP
chr122864481528644975+intron-Distal3.404904.82429K562TARDBP
chr122846975728469808+intron-Distal3.176603.26015K562PTBP1
chr122837166228371750+intron-Distal4.053323.34609K562TARDBP
chr122840570128405748+intron-Distal4.351264.31720HepG2MATR3
chr122840615328406234+intron-Distal4.255944.53244K562HNRNPM
chr122834360228343646+intron-Distal,intron-Proximal3.918964.71325HepG2RBM22
chr122840739828407468+intron-Distal4.125204.07352K562KHSRP
chr122844193128441961+intron-Distal5.133517.71312K562EXOSC5
chr122840588328405952+intron-Distal3.270024.08528HepG2SUGP2
chr122834518228345241+intron-Distal4.109104.31512K562KHSRP
chr122837482928374906+intron-Distal3.646474.57452HepG2SUGP2
chr122834548628345544+intron-Distal3.067873.73266K562KHSRP
chr122845631528456385+intron-Distal5.4978117.07918K562PTBP1
chr122835025928350323+intron-Distal3.986547.05443K562KHSRP
chr122834674028346787+intron-Distal3.474194.72639K562KHSRP
chr122842554628425773+intron-Distal4.7207729.49036K562KHSRP
chr122845848828458544+intron-Distal,intron-Proximal3.717193.95921HepG2U2AF2
chr122834720528347257+intron-Distal3.818837.86956K562EXOSC5
chr122850794728508024+intron-Distal4.830324.90095K562PTBP1
chr122844099828441025+intron-Distal4.7145411.25776K562EXOSC5
chr122845537128455467+intron-Distal4.521325.91698K562KHSRP
chr122835005028350090+intron-Distal4.044974.37030K562KHSRP
chr122844040828440459+intron-Distal4.976326.73640K562EXOSC5
chr122841559628415634+intron-Distal3.210573.90146K562KHSRP
chr122835294328353017+intron-Distal4.139243.62238HepG2MATR3
chr122844125828441293+intron-Distal5.138548.03988K562EXOSC5
chr122841581728415907+intron-Distal3.025383.76090HepG2U2AF2
chr122849133728491474+intron-Distal3.994893.60944K562TARDBP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CCDC91 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CCDC91 is not available on ENCORE database.

  • 59 RBPs can affect the levels of CCDC91.  








The Knockdown/knockout RNA-Seq assay for CCDC91 is not available on ENCORE database.





59 RBPs can affect the gene expression of CCDC91 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CCDC91ENSG00000123106.6191.91260251.45170-0.389801.857101.34110HepG2ACO1
CCDC91ENSG00000123106.6495.95020305.671600.698104.206903.56960HepG2AKAP1
CCDC91ENSG00000123106.6361.66270272.028600.410801.957601.44690HepG2BOP1
CCDC91ENSG00000123106.6356.91960234.967800.603003.771302.89070HepG2CALR
CCDC91ENSG00000123106.6253.96110382.58280-0.591202.840901.85080HepG2CCAR1
CCDC91ENSG00000123106.6315.62210170.885200.885103.811702.90770HepG2CNOT7
CCDC91ENSG00000123106.6254.01820180.746300.490902.042301.44900HepG2DDX21
CCDC91ENSG00000123106.6204.62590292.81330-0.517002.212301.64670HepG2DDX3X
CCDC91ENSG00000123106.6125.52610241.80470-0.945905.060304.27170HepG2EIF2S1
CCDC91ENSG00000123106.6288.02190171.279700.749704.052002.97160HepG2EIF3D
CCDC91ENSG00000123106.6408.64930260.175500.651303.114202.38730HepG2EIF4B
CCDC91ENSG00000123106.6515.09670366.628200.490404.114503.40640HepG2ETF1
CCDC91ENSG00000123106.6108.75790277.60480-1.351909.883108.72900HepG2NCBP2
CCDC91ENSG00000123106.6327.20800239.550900.449802.016901.37360HepG2NSUN2
CCDC91ENSG00000123106.6184.17550256.12680-0.475802.597501.99500HepG2PUS1
CCDC91ENSG00000123106.6393.39810218.470900.848403.976203.13660HepG2RAVER1
CCDC91ENSG00000123106.6580.82270306.427600.922505.679005.00380HepG2RBM22
CCDC91ENSG00000123106.6360.28860266.959600.432402.236601.62450HepG2RBM25
CCDC91ENSG00000123106.6268.63190171.348500.648602.330901.59420HepG2RPS3A
CCDC91ENSG00000123106.6201.96080132.346400.609702.420001.68030HepG2RRP9
CCDC91ENSG00000123106.6224.37990440.98090-0.974802.604401.30360HepG2SF1
CCDC91ENSG00000123106.6477.34630346.088500.463803.655103.10370HepG2SRFBP1
CCDC91ENSG00000123106.6183.93830300.46900-0.708005.366704.69900HepG2SSB
CCDC91ENSG00000123106.6454.34940264.361100.781205.552804.67920HepG2U2AF1
CCDC91ENSG00000123106.6355.73250218.263900.704603.845502.29570HepG2ZRANB2
CCDC91ENSG00000123106.6605.98820804.46480-0.408704.177303.50510K562AGGF1
CCDC91ENSG00000123106.6592.10630837.06310-0.499504.424103.59140K562AKAP8L
CCDC91ENSG00000123106.6458.600701061.69770-1.2111018.9800017.60970K562AQR
CCDC91ENSG00000123106.6691.49990878.24470-0.344903.169302.18730K562ATP5C1
CCDC91ENSG00000123106.6879.162301283.00580-0.545302.681701.64150K562CNOT7
CCDC91ENSG00000123106.6350.17920473.92130-0.436602.917201.84540K562DDX3X
CCDC91ENSG00000123106.61655.808701031.739600.6824015.2231013.81130K562DDX47
CCDC91ENSG00000123106.6637.04600900.85920-0.499906.145404.76060K562DKC1
CCDC91ENSG00000123106.6279.20350444.28460-0.670203.737702.66430K562EFTUD2
CCDC91ENSG00000123106.6365.37810520.51120-0.510504.697603.09830K562EIF2S1
CCDC91ENSG00000123106.6714.63920475.803400.586704.251602.93250K562EIF3D
CCDC91ENSG00000123106.6692.19510479.028400.531005.040303.98030K562EIF3G
CCDC91ENSG00000123106.6658.36510444.123600.567804.117202.70650K562FKBP4
CCDC91ENSG00000123106.6803.05300562.628800.513203.074002.32230K562G3BP2
CCDC91ENSG00000123106.6451.49150731.87980-0.696904.538103.52410K562GPKOW
CCDC91ENSG00000123106.6857.066701059.41360-0.305802.156701.48420K562GRSF1
CCDC91ENSG00000123106.6275.14910511.74640-0.895208.682307.67510K562HNRNPC
CCDC91ENSG00000123106.6734.61850888.39990-0.274202.016901.32130K562KIF1C
CCDC91ENSG00000123106.6771.91280995.22290-0.366603.111702.13770K562MBNL1
CCDC91ENSG00000123106.6501.13230714.38340-0.511502.435701.61750K562METAP2
CCDC91ENSG00000123106.6484.76390697.57330-0.525102.990202.06720K562NAA15
CCDC91ENSG00000123106.6328.58020494.42470-0.589504.813603.18910K562NCBP2
CCDC91ENSG00000123106.6858.922101232.58800-0.521102.477301.32490K562PABPC1
CCDC91ENSG00000123106.6478.02100836.07230-0.806603.315102.20410K562PABPN1
CCDC91ENSG00000123106.6553.64450994.45100-0.844903.091801.52080K562PPP1R8
CCDC91ENSG00000123106.6321.49230458.82120-0.513102.710901.81720K562PSIP1
CCDC91ENSG00000123106.6554.22400808.86320-0.545406.052705.20200K562RBM15
CCDC91ENSG00000123106.6655.76750440.463400.574104.006203.01970K562RPS19
CCDC91ENSG00000123106.6562.40400408.800900.460102.442501.50840K562RPS3
CCDC91ENSG00000123106.6674.166801168.56090-0.793603.542201.77000K562SBDS
CCDC91ENSG00000123106.6300.18770764.87550-1.349405.964103.98730K562SF1
CCDC91ENSG00000123106.6683.24600834.62600-0.288702.235601.49630K562SF3A3
CCDC91ENSG00000123106.6411.08470585.12440-0.509304.300603.22800K562SF3B4
CCDC91ENSG00000123106.6434.61010932.85680-1.101904.527902.69660K562SFPQ
CCDC91ENSG00000123106.6505.50690877.99890-0.796503.112901.78170K562SNRNP200
CCDC91ENSG00000123106.6254.76510396.78240-0.639204.046602.73180K562SRFBP1
CCDC91ENSG00000123106.6435.44220652.86870-0.584304.165603.30550K562SRSF1
CCDC91ENSG00000123106.6434.36920660.84120-0.605403.707102.88320K562TARDBP
CCDC91ENSG00000123106.6444.32100637.43090-0.520703.385402.46690K562TIA1
CCDC91ENSG00000123106.6324.35210441.31690-0.444302.232501.39940K562TIAL1
CCDC91ENSG00000123106.6299.03840468.77170-0.648604.767503.44600K562TRIM56
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CCDC91 is not available on ENCORE database.





12 RBPs can affect the splicing of CCDC91 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECCDC91ENSG00000123106.6chr12+284085132840859528343378283435742841013428410178-0.544000.002270.04027excludedK562SF3B4
SECCDC91ENSG00000123106.6chr12+2840851328408595283433782834357428410134284101780.654000.002710.04655includedHepG2U2AF1
SECCDC91ENSG00000123106.6chr12+284575582845764428412296284123752845858128458712-0.198000.006010.08727excludedHepG2U2AF1
SECCDC91ENSG00000123106.6chr12+284085132840859528343378283435742841013428410178-0.328000.004080.08989excludedK562AKAP8L
SECCDC91ENSG00000123106.6chr12+2840893428409011284085132840859528410134284101780.169000.004180.04013includedK562AQR
SECCDC91ENSG00000123106.6chr12+284575582845764428412296284123752845858128458712-0.109000.000150.03320excludedK562LARP4
SECCDC91ENSG00000123106.6chr12+284575582845764428412296284123752845858128458712-0.099000.000950.06289excludedK562HNRNPUL1
SECCDC91ENSG00000123106.6chr12+284085132840859528378727283787942841013428410178-0.477000.002680.07927excludedK562HNRNPU
SECCDC91ENSG00000123106.6chr12+284085132840859528343378283435742841013428410178-0.322000.004300.08277excludedK562AGGF1
A5SSCCDC91ENSG00000123106.6chr12+284585812845873928458581284587122845967428459878-0.209000.000410.02729shorterK562SRSF1
MXECCDC91ENSG00000123106.6chr12+2837907228379132284085132840859528378727283787942841013428410178-0.827000.000520.012552includedHepG2U2AF1
MXECCDC91ENSG00000123106.6chr12+28544236285443442860309328603186285153702851544828603282286033510.132000.001290.021921includedK562DROSHA
MXECCDC91ENSG00000123106.6chr12+28544236285443442860309328603186285153702851544828603282286033510.129000.000110.001271includedHepG2U2AF2
MXECCDC91ENSG00000123106.6chr12+28515370285154482854423628544344284605772846068228603093286031860.168000.008290.086761includedHepG2HNRNPUL1
MXECCDC91ENSG00000123106.6chr12+28379072283791322840851328408595283787272837879428410134284101780.521000.004830.081701includedK562FXR2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CCDC91 is not avaliable on ENCORE database.