BCAS2

General Information

Gene Name       : BCAS2
Gene ID             : ENSG00000116752.5
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: BCAS2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BCAS2ENSG00000116752.549.1541.6845.41ENCSR000AEF
HepG2BCAS2ENSG00000116752.524.6643.5834.12ENCSR985KAT
K562BCAS2ENSG00000116752.557.1356.8056.97ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BCAS2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • BCAS2 RNA is bound by 4 proteins.  







eCLIP assay for BCAS2 is not avaliable on ENCORE database.





4 proteins are bound to BCAS2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1115110263115110308-3'-UTR,intron-Distal4.355796.59996K562PUM2
chr1115110241115110348-3'-UTR,intron-Distal4.557088.45080K562IGF2BP1
chr1115110389115110447-3'-UTR,intron-Distal,intron-Proximal3.845176.47483K562PUM2
chr1115124141115124235-5'-UTR,CDS,intron-Distal3.299216.22708K562DDX3X
chr1115123935115124015-CDS,intron-Distal,intron-Proximal3.689885.03335K562UCHL5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BCAS2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BCAS2 is not available on ENCORE database.

  • 67 RBPs can affect the levels of BCAS2.  








The Knockdown/knockout RNA-Seq assay for BCAS2 is not available on ENCORE database.





67 RBPs can affect the gene expression of BCAS2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BCAS2ENSG00000116752.5544.92970435.450400.323502.378001.80720HepG2ACO1
BCAS2ENSG00000116752.5920.25000559.331500.718205.853805.11330HepG2AKAP1
BCAS2ENSG00000116752.5623.03750437.530600.509805.195204.17340HepG2AKAP8L
BCAS2ENSG00000116752.5593.42550439.705200.432402.548501.80340HepG2CIRBP
BCAS2ENSG00000116752.5570.83140435.397100.390603.433302.70740HepG2CKAP4
BCAS2ENSG00000116752.5608.81250340.765300.837105.116704.07200HepG2CNOT7
BCAS2ENSG00000116752.5381.42940610.99830-0.679805.486904.54940HepG2CPSF6
BCAS2ENSG00000116752.5866.79900644.326700.427804.272703.50550HepG2CELF1
BCAS2ENSG00000116752.5541.56430358.112300.596602.779702.10080HepG2DDX21
BCAS2ENSG00000116752.5701.03860535.843500.387602.185201.62210HepG2DDX3X
BCAS2ENSG00000116752.5512.63280328.702900.641004.185403.07450HepG2EEF2
BCAS2ENSG00000116752.5381.13460274.010400.476002.429401.39260HepG2EFTUD2
BCAS2ENSG00000116752.5301.90090442.50160-0.551602.808002.20980HepG2EIF2S1
BCAS2ENSG00000116752.5388.10590266.825900.540503.041702.09780HepG2EIF3D
BCAS2ENSG00000116752.5658.07960476.077000.467002.252101.62750HepG2EIF4B
BCAS2ENSG00000116752.5479.32280654.77480-0.450002.358801.60490HepG2EIF4G2
BCAS2ENSG00000116752.5996.76530808.152300.302502.817502.21200HepG2ETF1
BCAS2ENSG00000116752.5674.63120425.549500.664702.296801.53640HepG2EWSR1
BCAS2ENSG00000116752.5478.48470659.86260-0.463704.399903.51830HepG2HNRNPF
BCAS2ENSG00000116752.5494.88330661.01680-0.417602.423401.82890HepG2HNRNPLL
BCAS2ENSG00000116752.5476.82830649.77950-0.446503.484902.67930HepG2IGF2BP1
BCAS2ENSG00000116752.5667.78490496.250500.428202.320201.73890HepG2MATR3
BCAS2ENSG00000116752.5428.93180279.252000.619102.361801.38580HepG2METAP2
BCAS2ENSG00000116752.5427.68830586.08230-0.454502.680201.94360HepG2NSUN2
BCAS2ENSG00000116752.5269.77810365.65320-0.438702.745302.01050HepG2PPIL4
BCAS2ENSG00000116752.5674.57760456.347000.563802.941701.68860HepG2PRPF6
BCAS2ENSG00000116752.5519.08760655.85020-0.337402.222101.68000HepG2PUF60
BCAS2ENSG00000116752.5774.86440418.935900.887105.410904.44380HepG2RAVER1
BCAS2ENSG00000116752.51027.85570675.455900.605608.074607.29780HepG2RBM22
BCAS2ENSG00000116752.5240.67900365.09780-0.601204.799103.99060HepG2SAFB2
BCAS2ENSG00000116752.5747.68400522.388300.517203.196902.47050HepG2SF3A3
BCAS2ENSG00000116752.5418.92100628.79360-0.585907.249906.19790HepG2SLBP
BCAS2ENSG00000116752.5429.50240728.01820-0.761304.679003.65210HepG2SNRNP70
BCAS2ENSG00000116752.5995.45650535.893600.8933017.4086016.43670HepG2SRSF1
BCAS2ENSG00000116752.5448.00710648.28210-0.533105.475104.55290HepG2SRSF7
BCAS2ENSG00000116752.5342.82410435.97880-0.346802.291901.77960HepG2SRSF9
BCAS2ENSG00000116752.5497.18960662.33450-0.413804.061703.46570HepG2SSB
BCAS2ENSG00000116752.5316.36990644.15680-1.0258011.255009.94320HepG2TARDBP
BCAS2ENSG00000116752.5273.25900398.42920-0.544103.206802.67480HepG2TIAL1
BCAS2ENSG00000116752.5246.41100401.90640-0.705806.609305.80410HepG2TRIM56
BCAS2ENSG00000116752.5832.93290447.278100.8969015.9113014.64890HepG2UTP3
BCAS2ENSG00000116752.5682.21050460.692500.566303.197602.05560HepG2XRCC6
BCAS2ENSG00000116752.5808.35040617.695400.388002.776401.59500K562AARS
BCAS2ENSG00000116752.51023.797401275.10670-0.316702.541201.99230K562AGGF1
BCAS2ENSG00000116752.51007.915501326.78650-0.396603.553402.80940K562AKAP8L
BCAS2ENSG00000116752.51795.550001430.099400.328202.406101.85270K562AQR
BCAS2ENSG00000116752.5636.92840770.60710-0.274902.159801.30960K562BCLAF1
BCAS2ENSG00000116752.51779.260101196.358200.5725011.6246010.38960K562DDX47
BCAS2ENSG00000116752.5510.44080320.888500.669602.964601.92050K562EIF3A
BCAS2ENSG00000116752.5882.26880608.977500.534705.685804.86340K562FXR1
BCAS2ENSG00000116752.51062.59360691.665100.619304.605503.64110K562G3BP2
BCAS2ENSG00000116752.5979.944801607.85610-0.714403.306501.93790K562HNRNPA2B1
BCAS2ENSG00000116752.51371.73960857.055000.678406.694705.14990K562HNRNPM
BCAS2ENSG00000116752.52071.757001412.958200.552004.694203.66420K562HSPD1
BCAS2ENSG00000116752.5868.987201407.14680-0.695403.118602.05160K562PABPN1
BCAS2ENSG00000116752.51162.29500898.820300.370802.322801.56100K562PCBP3
BCAS2ENSG00000116752.5955.12860689.410100.470204.832703.77320K562POLR2G
BCAS2ENSG00000116752.5997.430701673.65650-0.746703.213801.59500K562PPP1R8
BCAS2ENSG00000116752.51262.16350647.947300.9619014.1277012.42210K562PRPF8
BCAS2ENSG00000116752.5407.77660606.11300-0.571804.478803.28320K562PSIP1
BCAS2ENSG00000116752.51048.226801315.94940-0.328202.479801.95930K562PUS1
BCAS2ENSG00000116752.5951.530301282.07740-0.430205.109604.32670K562RBM15
BCAS2ENSG00000116752.5428.20960552.91320-0.368702.215201.33130K562RCC2
BCAS2ENSG00000116752.51055.37050660.111300.676906.175604.94730K562RPS19
BCAS2ENSG00000116752.5374.29230524.15590-0.485803.082101.98610K562SRFBP1
BCAS2ENSG00000116752.51079.42880828.488400.381603.359602.58560K562SRSF1
BCAS2ENSG00000116752.51110.44550691.518000.683202.854502.02110K562SYNCRIP
BCAS2ENSG00000116752.5391.64230582.98980-0.573903.848902.73690K562TIAL1
BCAS2ENSG00000116752.5428.72530619.25490-0.530503.976902.79930K562TRIM56
BCAS2ENSG00000116752.5515.88050692.91410-0.425602.558101.78510K562U2AF2
BCAS2ENSG00000116752.5998.45700845.873900.239202.124401.37550K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BCAS2 is not available on ENCORE database.





12 RBPs can affect the splicing of BCAS2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBCAS2ENSG00000116752.5chr1-1151193081151193791151182101151183721151239191151240120.067000.000080.00247includedK562SRSF1
SEBCAS2ENSG00000116752.5chr1-115119308115119379115118210115118372115123919115124012-0.112000.000040.00139excludedK562SF3B4
SEBCAS2ENSG00000116752.5chr1-115119308115119379115118210115118372115123919115124012-0.058000.000280.01156excludedK562AKAP8L
SEBCAS2ENSG00000116752.5chr1-115119308115119379115118210115118372115123919115124012-0.164000.000000.00000excludedK562AQR
SEBCAS2ENSG00000116752.5chr1-115119308115119379115118210115118372115123919115124012-0.100000.000000.00000excludedK562PUS1
SEBCAS2ENSG00000116752.5chr1-1151193081151193791151182101151183721151239191151240120.070000.000260.08747includedK562KHSRP
SEBCAS2ENSG00000116752.5chr1-115119308115119379115118210115118372115123919115124012-0.282000.000000.00000excludedK562U2AF1
SEBCAS2ENSG00000116752.5chr1-115119308115119379115118210115118372115123919115124012-0.089000.000000.00018excludedK562UTP18
SEBCAS2ENSG00000116752.5chr1-115119308115119379115118210115118372115123919115124012-0.380000.000000.00000excludedK562U2AF2
SEBCAS2ENSG00000116752.5chr1-115119308115119379115118210115118372115123919115124012-0.078000.000010.00077excludedK562AGGF1
SEBCAS2ENSG00000116752.5chr1-1151193081151193791151182101151183721151239191151240120.058000.002980.09089includedK562PTBP1
SEBCAS2ENSG00000116752.5chr1-115119308115119379115118210115118372115123919115124012-0.091000.000020.00074excludedK562HNRNPC
A3SSBCAS2ENSG00000116752.5chr1-1151182101151184291151182101151183721151193081151194060.085000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BCAS2 is not avaliable on ENCORE database.