ANAPC4

General Information

Gene Name       : ANAPC4
Gene ID             : ENSG00000053900.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ANAPC4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ANAPC4ENSG00000053900.1032.3027.2929.79ENCSR000AEF
HepG2ANAPC4ENSG00000053900.1011.0117.7214.36ENCSR985KAT
K562ANAPC4ENSG00000053900.1028.3031.6229.96ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ANAPC4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ANAPC4 RNA is bound by 21 proteins.  







eCLIP assay for ANAPC4 is not avaliable on ENCORE database.





21 proteins are bound to ANAPC4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr42542003125420095+3'-UTR5.086926.57575HepG2SUB1
chr42539175625391783+3'-UTR,CDS,intron-Proximal3.602543.68471HepG2BCLAF1
chr42541997525420031+3'-UTR,CDS3.639463.99363HepG2SUB1
chr42542000925420101+3'-UTR6.255186.06289K562PUM2
chr42539178325391843+3'-UTR,CDS,intron-Proximal5.6822710.24913HepG2BCLAF1
chr42537894425379005+5'-UTR,intron-Proximal4.994285.01842HepG2PRPF8
chr42538488225385013+5'-UTR,CDS,intron-Proximal3.066616.39923HepG2BCLAF1
chr42537904725379120+5'-UTR,CDS5.060994.97000K562DDX3X
chr42541603825416133+CDS,intron-Proximal3.915854.75435K562EFTUD2
chr42541707825417113+CDS,intron-Proximal4.665304.78529HepG2BCLAF1
chr42539599525396045+CDS,intron-Proximal3.672064.15711K562AQR
chr42539403325394100+CDS,intron-Proximal3.723463.76553K562PRPF8
chr42540723825407313+CDS,intron-Proximal3.292564.38107K562AQR
chr42540719325407239+CDS,intron-Proximal5.124077.04013HepG2BCLAF1
chr42541135425411414+CDS,intron-Proximal4.480334.37348HepG2BCLAF1
chr42541607825416130+CDS,intron-Proximal5.1996211.79452K562U2AF2
chr42539393925394007+CDS,intron-Proximal4.346097.29386HepG2U2AF2
chr42539644125396494+CDS,intron-Proximal3.588803.55754HepG2U2AF2
chr42538200125382088+CDS,intron-Proximal3.344334.48818HepG2GRWD1
chr42539830425398400+CDS,intron-Proximal4.229627.09561HepG2BCLAF1
chr42538199525382097+CDS,intron-Proximal4.066927.88406K562DDX24
chr42541607525416131+CDS,intron-Proximal3.655384.57751HepG2U2AF2
chr42538200925382097+CDS,intron-Proximal3.526885.97823HepG2BCLAF1
chr42539253225392564+CDS,intron-Proximal3.554105.97823HepG2BCLAF1
chr42539593125395999+CDS,intron-Proximal3.752894.41267HepG2PPIG
chr42539846425398541+CDS,intron-Proximal4.330295.32062K562EFTUD2
chr42541628525416325+CDS,intron-Proximal4.636094.34038HepG2BCLAF1
chr42541527625415376+CDS,intron-Proximal3.427915.56491HepG2BCLAF1
chr42539847225398570+CDS,intron-Proximal5.352169.49243K562PRPF8
chr42541711325417164+CDS,intron-Proximal5.399177.04013HepG2BCLAF1
chr42539850625398557+CDS,intron-Proximal4.385593.45943HepG2BCLAF1
chr42538200125382103+CDS,intron-Proximal4.3426112.18291HepG2PPIG
chr42540462325404649+CDS,intron-Proximal4.491343.45943HepG2BCLAF1
chr42541624025416322+CDS3.922464.07825K562YBX3
chr42541979625419879+CDS5.153766.58593HepG2BCLAF1
chr42541607925416126+CDS,intron-Proximal4.615255.38313K562U2AF1
chr42539377125393823+intron-Distal3.128873.73266K562KHSRP
chr42539890525398976+intron-Distal3.051463.31127HepG2MATR3
chr42539150925391663+intron-Distal,intron-Proximal3.290013.53952HepG2KHSRP
chr42539922825399298+intron-Distal4.430985.58061HepG2SUGP2
chr42541944725419537+intron-Distal,intron-Proximal3.214913.31830K562KHSRP
chr42538379725383919+intron-Distal4.223316.07515K562QKI
chr42539141925391499+intron-Distal4.088783.66668K562KHSRP
chr42540289825402964+intron-Distal3.530843.39857HepG2HNRNPM
chr42539153325391702+intron-Distal,intron-Proximal3.173746.82127K562KHSRP
chr42538527025385366+intron-Distal4.531856.51328K562KHSRP
chr42539275625392843+intron-Distal4.073233.88068HepG2CSTF2
chr42539268225392742+intron-Distal,intron-Proximal3.773205.29732HepG2KHSRP
chr42541576925415905+intron-Distal,intron-Proximal4.0919910.34114K562KHSRP
chr42541569125415751+intron-Distal4.554685.18738K562TARDBP
chr42539604525396102+intron-Distal,intron-Proximal4.473854.13847K562AQR
chr42539280425392863+intron-Distal4.846287.00602HepG2KHSRP
chr42539286325392947+intron-Distal5.224218.90052HepG2KHSRP
chr42539288525392948+intron-Distal4.082314.14103K562KHSRP
chr42540290025402970+intron-Distal4.098754.02846K562HNRNPM
chr42541556025415618+intron-Distal4.140863.34609K562TARDBP
chr42540287925402955+intron-Distal4.114737.29258HepG2SUGP2
chr42539270325392751+intron-Distal,intron-Proximal3.436383.55754HepG2U2AF2
chr42539275425392876+intron-Distal4.079007.77977K562CSTF2T
chr42540310525403162+intron-Distal3.419616.79980HepG2SUGP2
chr42538374025383872+intron-Distal3.735313.06005HepG2QKI
chr42539887525398972+intron-Distal3.933177.19049K562MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ANAPC4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ANAPC4 is not available on ENCORE database.

  • 65 RBPs can affect the levels of ANAPC4.  








The Knockdown/knockout RNA-Seq assay for ANAPC4 is not available on ENCORE database.





65 RBPs can affect the gene expression of ANAPC4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ANAPC4ENSG00000053900.6625.75650444.911000.492002.672302.14950HepG2AKAP1
ANAPC4ENSG00000053900.6328.42680433.26640-0.399702.048701.52800HepG2BOP1
ANAPC4ENSG00000053900.6539.54390419.306900.363602.005601.41690HepG2DDX21
ANAPC4ENSG00000053900.6569.67640426.206000.418502.233701.66600HepG2DDX3X
ANAPC4ENSG00000053900.6250.06800366.08460-0.549902.641802.03820HepG2DDX6
ANAPC4ENSG00000053900.6590.30600378.689600.640303.564902.78880HepG2EIF4B
ANAPC4ENSG00000053900.6910.27520756.132100.267602.045001.30660HepG2EIF4G1
ANAPC4ENSG00000053900.6567.87000724.33510-0.351102.098301.38210HepG2EIF4G2
ANAPC4ENSG00000053900.6583.57950392.408500.572503.881703.07140HepG2FXR1
ANAPC4ENSG00000053900.6515.44440364.043300.501602.914302.23200HepG2G3BP1
ANAPC4ENSG00000053900.6566.02790386.443500.550503.654702.62380HepG2G3BP2
ANAPC4ENSG00000053900.6339.81770450.91120-0.408101.852501.32160HepG2GPKOW
ANAPC4ENSG00000053900.6397.49800506.19680-0.348802.380401.71160HepG2HNRNPF
ANAPC4ENSG00000053900.6621.38550368.564000.753506.633805.58590HepG2HNRNPK
ANAPC4ENSG00000053900.6526.82070698.22420-0.406404.309403.48190HepG2HNRNPL
ANAPC4ENSG00000053900.6359.17320498.46100-0.472803.240902.46180HepG2IGF2BP1
ANAPC4ENSG00000053900.6511.56060370.051600.467102.572001.91890HepG2IGF2BP2
ANAPC4ENSG00000053900.6592.73850347.238900.771402.393101.48590HepG2IGF2BP3
ANAPC4ENSG00000053900.6565.08300392.545200.525503.213002.50680HepG2MAGOH
ANAPC4ENSG00000053900.6639.07230394.750600.694904.976704.15170HepG2MATR3
ANAPC4ENSG00000053900.6663.35030404.055900.715105.613804.72570HepG2NCBP2
ANAPC4ENSG00000053900.6519.53780359.869200.529703.252402.47160HepG2PABPC4
ANAPC4ENSG00000053900.6470.11030363.366100.371502.469201.88820HepG2PCBP1
ANAPC4ENSG00000053900.6788.80020445.171200.825206.045904.55570HepG2PCBP2
ANAPC4ENSG00000053900.6572.85770369.723900.631605.606604.88340HepG2PTBP1
ANAPC4ENSG00000053900.6260.87370725.50780-1.4756025.5882024.01970HepG2PUF60
ANAPC4ENSG00000053900.6607.70010769.58900-0.340702.582801.93460HepG2PUM2
ANAPC4ENSG00000053900.6530.01790400.451500.404302.573901.96740HepG2QKI
ANAPC4ENSG00000053900.61040.79120750.636900.471405.171804.51800HepG2RBM22
ANAPC4ENSG00000053900.6514.66620363.423600.501903.446302.69970HepG2RBM25
ANAPC4ENSG00000053900.6644.92420411.479400.648206.936806.14870HepG2NELFE
ANAPC4ENSG00000053900.6560.34110383.214900.548104.929504.13750HepG2RECQL
ANAPC4ENSG00000053900.6295.57110378.20600-0.355702.120101.54300HepG2SAFB2
ANAPC4ENSG00000053900.6326.22000785.89080-1.268504.430002.62660HepG2SF1
ANAPC4ENSG00000053900.6671.41440384.956700.8024010.598209.55720HepG2SF3B4
ANAPC4ENSG00000053900.6488.21260695.61040-0.510806.113905.13550HepG2SLBP
ANAPC4ENSG00000053900.6292.30200701.41120-1.262804.661602.86030HepG2SNRNP200
ANAPC4ENSG00000053900.61193.84100847.814200.493707.778307.05610HepG2SRFBP1
ANAPC4ENSG00000053900.6964.81450401.800701.2637029.7211028.53600HepG2SRSF1
ANAPC4ENSG00000053900.6422.09710326.876900.368702.385201.86530HepG2SRSF9
ANAPC4ENSG00000053900.6204.17810309.68750-0.601003.944802.83410HepG2SUPT6H
ANAPC4ENSG00000053900.6755.95510361.124201.0657018.0806016.82840HepG2TAF15
ANAPC4ENSG00000053900.6485.50580331.855700.548804.243003.21620HepG2TIA1
ANAPC4ENSG00000053900.6256.05600416.35820-0.701406.851806.03320HepG2TRIM56
ANAPC4ENSG00000053900.6511.93090292.804700.805907.602606.34380HepG2UCHL5
ANAPC4ENSG00000053900.6448.19100347.578600.366702.591401.93800HepG2ZC3H8
ANAPC4ENSG00000053900.61048.856801361.38740-0.376302.997001.71760K562ABCF1
ANAPC4ENSG00000053900.61253.151901013.781300.305703.166402.56620K562AGGF1
ANAPC4ENSG00000053900.61278.031001725.45890-0.433104.101003.41400K562AQR
ANAPC4ENSG00000053900.6774.82620966.18900-0.318403.210902.17810K562BCLAF1
ANAPC4ENSG00000053900.61000.118601211.50240-0.276602.366401.35000K562CPEB4
ANAPC4ENSG00000053900.61445.426201253.650000.205301.925001.36280K562DDX47
ANAPC4ENSG00000053900.61389.492101135.192700.291502.833601.94830K562DKC1
ANAPC4ENSG00000053900.6694.72090870.34490-0.325203.041901.76160K562EIF2S1
ANAPC4ENSG00000053900.6572.75820827.82880-0.531404.812203.72830K562EIF4A3
ANAPC4ENSG00000053900.6583.43820745.50310-0.353602.924101.72940K562EIF4B
ANAPC4ENSG00000053900.61301.03090912.116200.512303.446702.64050K562G3BP2
ANAPC4ENSG00000053900.6549.04210711.06670-0.373102.442101.69440K562GPKOW
ANAPC4ENSG00000053900.61561.665501119.525500.480104.739003.60710K562KIF1C
ANAPC4ENSG00000053900.6507.02130694.08000-0.453103.337702.37450K562METAP2
ANAPC4ENSG00000053900.6747.40990581.479300.362102.686901.89890K562POLR2G
ANAPC4ENSG00000053900.6867.040701110.87930-0.357502.672801.86970K562PPIG
ANAPC4ENSG00000053900.61216.782302042.50460-0.7473010.002708.43100K562PUF60
ANAPC4ENSG00000053900.62575.028102172.333500.245202.443201.44490K562PUM1
ANAPC4ENSG00000053900.61783.257201046.228700.7692010.014909.02860K562PUS1
ANAPC4ENSG00000053900.61321.241001019.323100.374203.917303.22900K562RBM15
ANAPC4ENSG00000053900.6402.52890696.49260-0.791004.725303.28810K562SRSF4
ANAPC4ENSG00000053900.6847.65480583.234700.539305.737004.54730K562SYNCRIP
ANAPC4ENSG00000053900.6710.342001094.33310-0.623503.618302.80490K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ANAPC4 is not available on ENCORE database.





3 RBPs can affect the splicing of ANAPC4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEANAPC4ENSG00000053900.6chr4+254192372541936125417021254171622541977625420111-0.130000.000000.00000excludedHepG2U2AF2
SEANAPC4ENSG00000053900.6chr4+2539438425394473253939592539404325395426253955130.082000.000010.00033includedK562AQR
SEANAPC4ENSG00000053900.6chr4+2540340625403614253984692539852125404592254046480.144000.000000.00000includedK562AQR
SEANAPC4ENSG00000053900.6chr4+254180462541822025417087254171622541923725419361-0.063000.000220.00344excludedK562AQR
SEANAPC4ENSG00000053900.6chr4+253962922539633525395931253959962539645025396527-0.098000.000470.00638excludedK562AQR
SEANAPC4ENSG00000053900.6chr4+254113652541141325408818254088752541526625416126-0.058000.002200.02373excludedK562AQR
A3SSANAPC4ENSG00000053900.6chr4+2541702125417162254170872541716225416220254163220.068000.005770.03277longerK562AQR
A3SSANAPC4ENSG00000053900.6chr4+2539173425391842253917572539184225390459253905040.092000.000010.00014longerK562AQR
A3SSANAPC4ENSG00000053900.6chr4+253962922539653525396450253965352539593125395996-0.151000.002920.01800shorterK562AQR
A5SSANAPC4ENSG00000053900.6chr4+254170872541936125417087254171622541977625420120-0.127000.000000.00000shorterHepG2U2AF2
A5SSANAPC4ENSG00000053900.6chr4+254071942540724425407194254072412540845025408507-0.359000.001360.09759shorterK562FXR1
RIANAPC4ENSG00000053900.6chr4+2539629225396535253962922539633525396450253965350.107000.012560.06579includedK562AQR
MXEANAPC4ENSG00000053900.6chr4+25411281254114132541526625415364254088182540887525415945254160070.113000.000100.001191includedK562AQR
MXEANAPC4ENSG00000053900.6chr4+25393996253940432539542625395513253925322539263725395931253959960.079000.004110.030451includedK562AQR
MXEANAPC4ENSG00000053900.6chr4+25411365254114132541526625415364254088182540887525415945254160070.058000.014070.083271includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ANAPC4 is not avaliable on ENCORE database.