USP9Y

General Information

Gene Name       : USP9Y
Gene ID             : ENSG00000114374.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: USP9Y)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878USP9YENSG00000114374.120.000.000.00ENCSR000AEF
HepG2USP9YENSG00000114374.129.8812.0710.98ENCSR985KAT
K562USP9YENSG00000114374.120.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for USP9Y is not avaliable on ENCORE database.



Proteins bound to RNA
  • USP9Y RNA is bound by 16 proteins.  







eCLIP assay for USP9Y is not avaliable on ENCORE database.





16 proteins are bound to USP9Y RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrY1481394414814025+5'-UTR,intron-Proximal4.049094.16174HepG2PRPF8
chrY1488552514885569+CDS3.529659.41803HepG2BCLAF1
chrY1494988114949926+CDS4.9756912.44336HepG2BCLAF1
chrY1487048114870518+CDS4.622559.74753HepG2BCLAF1
chrY1488300914883031+CDS3.554105.97823HepG2BCLAF1
chrY1490354414903557+CDS4.7230410.19430HepG2BCLAF1
chrY1490496414905026+CDS,intron-Proximal4.7007321.33695HepG2BCLAF1
chrY1483408314834106+CDS3.128186.50801HepG2BCLAF1
chrY1492480114924828+CDS3.291076.20035HepG2BCLAF1
chrY1484841514848478+CDS5.1056512.89578HepG2BCLAF1
chrY1490337314903471+CDS,intron-Proximal4.332853.35169HepG2U2AF2
chrY1485144914851535+CDS,intron-Proximal4.334644.16554HepG2PPIG
chrY1483869214838725+CDS4.017578.49795HepG2BCLAF1
chrY1483263114832664+CDS3.659558.25092HepG2BCLAF1
chrY1488876014888793+CDS4.109798.94445HepG2BCLAF1
chrY1484793114847954+CDS,intron-Proximal4.651578.85766HepG2BCLAF1
chrY1495240114952428+CDS5.254077.95223HepG2BCLAF1
chrY1488740514887458+CDS4.6319819.87774HepG2BCLAF1
chrY1483705614837159+CDS,intron-Proximal4.5474925.03380HepG2BCLAF1
chrY1485020414850238+CDS3.8088810.35753HepG2BCLAF1
chrY1486912214869171+CDS3.9119910.98590HepG2BCLAF1
chrY1490348314903558+CDS,intron-Proximal4.238603.71264HepG2FXR2
chrY1488745814887500+CDS4.2230414.24397HepG2BCLAF1
chrY1492806314928100+CDS3.8147210.05563HepG2BCLAF1
chrY1484795414847994+CDS3.9899710.78406HepG2BCLAF1
chrY1488997814890046+CDS4.2413011.21209HepG2BCLAF1
chrY1483404214834051+CDS3.337624.74886HepG2BCLAF1
chrY1487239114872453+CDS,intron-Proximal4.416834.12401HepG2U2AF2
chrY1488582714885866+CDS,intron-Proximal4.3666215.11988HepG2BCLAF1
chrY1483260914832675+CDS,intron-Proximal3.736686.20926HepG2PPIG
chrY1490504714905116+CDS3.6691112.60692HepG2BCLAF1
chrY1488562614885650+CDS3.554105.97823HepG2BCLAF1
chrY1488858214888632+CDS,intron-Proximal4.2066712.50436HepG2BCLAF1
chrY1483405114834077+CDS3.503087.42278HepG2BCLAF1
chrY1494992614949971+CDS3.8204710.26109HepG2BCLAF1
chrY1483254314832604+CDS3.367413.63043HepG2GRWD1
chrY1484834414848362+CDS,intron-Proximal5.178077.95223HepG2BCLAF1
chrY1489870814898725+CDS5.054107.39496HepG2BCLAF1
chrY1484816614848182+CDS5.111847.49561HepG2BCLAF1
chrY1487517114875241+intron-Distal4.045913.69311HepG2CSTF2
chrY1485485614854934+intron-Distal3.979425.81617HepG2QKI
chrY1490996114910073+intron-Distal6.4569721.44822HepG2PCBP2
chrY1481618014816242+intron-Distal3.957213.63454HepG2SUGP2
chrY1487892814878973+intron-Distal3.796255.06177HepG2SUGP2
chrY1490786414907918+intron-Distal3.151343.11000HepG2HNRNPM
chrY1482808914828183+intron-Distal4.613525.85495HepG2QKI
chrY1488603914886138+intron-Distal3.791624.50744HepG2U2AF2
chrY1487879314878893+intron-Distal3.500185.59320HepG2SUGP2
chrY1493254714932646+intron-Distal4.007303.53723HepG2PTBP1
chrY1483427914834397+intron-Distal3.340703.27276HepG2HNRNPL
chrY1483890814839029+intron-Distal3.652775.30252HepG2KHSRP
chrY1487734014877392+intron-Distal3.365783.10640HepG2SUGP2
chrY1491451714914563+intron-Distal4.286523.29248HepG2SUGP2
chrY1487813814878203+intron-Distal4.980875.84463HepG2SUGP2
chrY1491517914915243+intron-Distal4.237443.27829HepG2MATR3
chrY1491865214918712+intron-Distal3.638504.81844HepG2SUGP2
chrY1490997814910085+intron-Distal3.100523.70770HepG2DDX59
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for USP9Y is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for USP9Y is not available on ENCORE database.

  • 70 RBPs can affect the levels of USP9Y.  








The Knockdown/knockout RNA-Seq assay for USP9Y is not available on ENCORE database.





70 RBPs can affect the gene expression of USP9Y :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
USP9YENSG00000114374.8978.467401277.61780-0.384905.470004.67160HepG2ACO1
USP9YENSG00000114374.8822.561501121.82690-0.447703.320802.45920HepG2ASCC1
USP9YENSG00000114374.81916.296601602.881800.257603.025502.31260HepG2AUH
USP9YENSG00000114374.8574.50410915.11170-0.671603.079002.08900HepG2BCCIP
USP9YENSG00000114374.81519.335401212.845900.324903.012202.20910HepG2CALR
USP9YENSG00000114374.8950.950701277.33190-0.425706.906505.94130HepG2CKAP4
USP9YENSG00000114374.81000.841701829.47140-0.870207.077305.85780HepG2CNOT7
USP9YENSG00000114374.81307.063201013.887300.366302.754302.06880HepG2CPSF6
USP9YENSG00000114374.8858.027101064.82110-0.311502.872901.83490HepG2YBX3
USP9YENSG00000114374.81076.683301284.47050-0.254602.382901.77800HepG2CELF1
USP9YENSG00000114374.8982.840501181.60960-0.265702.968302.10630HepG2DDX19B
USP9YENSG00000114374.81632.138501072.523100.605706.005005.14930HepG2EIF2S1
USP9YENSG00000114374.8864.853801185.26420-0.454703.004502.33850HepG2EIF4A3
USP9YENSG00000114374.81674.050201154.020900.536602.792302.10070HepG2EIF4B
USP9YENSG00000114374.82249.051201840.266500.289304.285703.56540HepG2ETF1
USP9YENSG00000114374.8779.751601248.45360-0.679109.264607.76080HepG2EWSR1
USP9YENSG00000114374.81376.58300975.303600.497105.378903.86570HepG2FASTKD2
USP9YENSG00000114374.81091.652901417.38970-0.376702.533601.79340HepG2FIP1L1
USP9YENSG00000114374.81574.834901015.625600.632702.390801.45340HepG2FTO
USP9YENSG00000114374.81095.56190647.634700.758309.967408.52050HepG2FUBP3
USP9YENSG00000114374.8944.014401195.88160-0.341202.174201.55760HepG2FXR1
USP9YENSG00000114374.81392.156901109.355700.327502.003401.43370HepG2G3BP1
USP9YENSG00000114374.8650.11130847.57010-0.382602.448901.61060HepG2GEMIN5
USP9YENSG00000114374.81676.877201269.320300.401605.809404.53820HepG2HNRNPA2B1
USP9YENSG00000114374.8484.012001174.16820-1.2785024.0400022.22860HepG2HNRNPC
USP9YENSG00000114374.81371.274301123.322900.287601.895001.31130HepG2HNRNPK
USP9YENSG00000114374.81440.541601258.180200.195201.941501.36460HepG2HNRNPL
USP9YENSG00000114374.8709.518901166.40640-0.7172014.8287013.51780HepG2HNRNPU
USP9YENSG00000114374.81415.898501191.447900.248903.121502.34640HepG2ILF2
USP9YENSG00000114374.81201.505201742.51540-0.536304.121102.61550HepG2KHDRBS1
USP9YENSG00000114374.81620.006301134.208900.514203.559602.40360HepG2KHSRP
USP9YENSG00000114374.8832.454701196.29910-0.523104.260103.44920HepG2MAGOH
USP9YENSG00000114374.8763.781201202.99470-0.655405.730704.84880HepG2MATR3
USP9YENSG00000114374.81649.888001231.332000.422003.160402.48580HepG2NCBP2
USP9YENSG00000114374.81058.947601369.58220-0.371104.075303.14970HepG2NOL12
USP9YENSG00000114374.81245.58120972.538500.356902.562001.84100HepG2NSUN2
USP9YENSG00000114374.8447.97440711.68220-0.667803.796001.92590HepG2PA2G4
USP9YENSG00000114374.81505.560601096.581600.457203.649702.82800HepG2PABPC4
USP9YENSG00000114374.81232.397901051.748100.228602.043201.50880HepG2PCBP1
USP9YENSG00000114374.8602.92490787.20370-0.384803.078801.77800HepG2PKM
USP9YENSG00000114374.8831.755601040.34370-0.322803.035002.26610HepG2PPIL4
USP9YENSG00000114374.8834.338601023.71540-0.295102.644001.88560HepG2PRPF4
USP9YENSG00000114374.81303.880601070.188100.284802.849102.29550HepG2PTBP1
USP9YENSG00000114374.8947.249101307.36670-0.464802.669702.08240HepG2PUF60
USP9YENSG00000114374.81062.560401301.33540-0.292403.478702.80560HepG2PUS1
USP9YENSG00000114374.81671.462701159.050600.528107.697406.73500HepG2QKI
USP9YENSG00000114374.82126.369001538.134000.467104.664604.03710HepG2RBM22
USP9YENSG00000114374.81601.494001051.909000.606308.338007.21670HepG2RBM25
USP9YENSG00000114374.81365.808101109.266500.300003.255002.59350HepG2RECQL
USP9YENSG00000114374.8753.31000926.22100-0.298101.975301.44780HepG2RPS19
USP9YENSG00000114374.81345.192501836.38220-0.449102.821102.01420HepG2RPS3A
USP9YENSG00000114374.81554.762301114.212800.480607.814306.90100HepG2SF3B4
USP9YENSG00000114374.8940.817501211.36550-0.364605.443704.59290HepG2SMN1
USP9YENSG00000114374.82759.833701737.286500.6676020.9585019.91560HepG2SRFBP1
USP9YENSG00000114374.81359.016601162.993300.224602.045801.62200HepG2SRSF1
USP9YENSG00000114374.81050.201601290.80700-0.297602.462801.86770HepG2SRSF5
USP9YENSG00000114374.81179.23310946.153900.317603.685803.06880HepG2SRSF9
USP9YENSG00000114374.81835.714301508.412200.283203.870803.28690HepG2SSB
USP9YENSG00000114374.81483.039801045.333700.504507.361306.52210HepG2TAF15
USP9YENSG00000114374.81149.855101722.31490-0.582902.307701.33200HepG2TBRG4
USP9YENSG00000114374.81449.15020960.529900.593208.330206.88570HepG2TIA1
USP9YENSG00000114374.8858.229301133.43370-0.401304.086203.50380HepG2TIAL1
USP9YENSG00000114374.8868.722501143.51000-0.396505.127204.40760HepG2TRIM56
USP9YENSG00000114374.81530.582801212.491800.336002.376001.79000HepG2U2AF1
USP9YENSG00000114374.81794.354601351.876900.408402.351701.58490HepG2UBE2L3
USP9YENSG00000114374.8959.688301417.10410-0.5623010.379209.33580HepG2UTP3
USP9YENSG00000114374.81156.078801644.81390-0.508703.310702.10210HepG2XPO5
USP9YENSG00000114374.8568.95380881.73440-0.632002.896502.15420HepG2XRN2
USP9YENSG00000114374.81173.106001010.247400.215502.098201.50120HepG2ZC3H8
USP9YENSG00000114374.81844.764201614.300000.192402.337801.82270HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for USP9Y is not available on ENCORE database.





3 RBPs can affect the splicing of USP9Y :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEUSP9YENSG00000114374.8chrY+149685571496877014968264149684211496949014969586-0.241000.000020.00081excludedHepG2U2AF1
SEUSP9YENSG00000114374.8chrY+149303541493054514928058149282791494561314945787-0.254000.009140.08499excludedHepG2U2AF2
SEUSP9YENSG00000114374.8chrY+149685571496877014968264149684211496949014969586-0.331000.000000.00000excludedHepG2U2AF2
SEUSP9YENSG00000114374.8chrY+149303541493054514928058149282791494561314945787-0.418000.000000.00036excludedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for USP9Y is not avaliable on ENCORE database.