TULP3

General Information

Gene Name       : TULP3
Gene ID             : ENSG00000078246.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TULP3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TULP3ENSG00000078246.166.207.076.63ENCSR000AEF
HepG2TULP3ENSG00000078246.1610.4411.7611.10ENCSR985KAT
K562TULP3ENSG00000078246.167.098.948.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TULP3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TULP3 RNA is bound by 6 proteins.  







eCLIP assay for TULP3 is not avaliable on ENCORE database.





6 proteins are bound to TULP3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1229863912986449+5'-UTR,intron-Distal,intron-Proximal4.563408.81962K562DDX3X
chr1229863892986536+5'-UTR,intron-Distal,intron-Proximal3.345244.63906HepG2NCBP2
chr1230298893029981+CDS,intron-Distal,intron-Proximal3.782513.96535HepG2AQR
chr1230187263018790+CDS,intron-Distal,intron-Proximal5.087386.35567HepG2PRPF8
chr1229944462994545+3'-UTR,CDS,intron-Distal,intron-Proximal3.6859612.39892K562DDX3X
chr1229974432997510+CDS,intron-Distal3.775903.02850K562YBX3
chr1229945702994640+CDS,intron-Distal3.824593.66655K562YBX3
chr1230045403004622+intron-Distal5.6180110.31535HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TULP3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TULP3 is not available on ENCORE database.

  • 85 RBPs can affect the levels of TULP3.  








The Knockdown/knockout RNA-Seq assay for TULP3 is not available on ENCORE database.





85 RBPs can affect the gene expression of TULP3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TULP3ENSG00000078246.11420.02390305.364300.459802.568201.53260HepG2AATF
TULP3ENSG00000078246.11580.03850391.375200.567504.911404.14500HepG2ACO1
TULP3ENSG00000078246.11509.77450384.396800.407202.276801.37130HepG2ADAR
TULP3ENSG00000078246.11575.76010208.560301.464908.312707.44460HepG2AKAP1
TULP3ENSG00000078246.11341.49000172.539600.984805.465104.37850HepG2ASCC1
TULP3ENSG00000078246.11460.53890315.849700.544002.501301.61320HepG2BCCIP
TULP3ENSG00000078246.11755.638101252.46410-0.729003.942603.24100HepG2BOP1
TULP3ENSG00000078246.11836.73150546.697800.613906.431404.61160HepG2BUD13
TULP3ENSG00000078246.111101.47230731.425100.590607.412206.23170HepG2CALR
TULP3ENSG00000078246.111282.56750852.970500.588402.568601.63460HepG2CCAR1
TULP3ENSG00000078246.11781.58770512.094700.609906.196303.08080HepG2CEBPZ
TULP3ENSG00000078246.11400.84050163.933101.2898012.0235010.52620HepG2CIRBP
TULP3ENSG00000078246.11525.74010336.871900.642005.071304.18180HepG2DDX21
TULP3ENSG00000078246.11539.48390199.727901.4334016.1166014.73510HepG2DDX3X
TULP3ENSG00000078246.11481.62280324.474900.569704.225302.58410HepG2DDX52
TULP3ENSG00000078246.11508.56540171.704901.5664017.0198015.66030HepG2DDX6
TULP3ENSG00000078246.11475.58920374.445500.344902.153801.54430HepG2DKC1
TULP3ENSG00000078246.11547.93370387.103000.501202.854401.92010HepG2EEF2
TULP3ENSG00000078246.11439.56450322.674500.445902.339801.32250HepG2EFTUD2
TULP3ENSG00000078246.11431.72710164.930601.3882013.7811012.52640HepG2EIF2S1
TULP3ENSG00000078246.11733.04210553.525000.405103.053801.81950HepG2EIF2S2
TULP3ENSG00000078246.11472.01980182.203201.3732012.8051011.45720HepG2EIF4A3
TULP3ENSG00000078246.11365.03350177.523601.039906.179505.18130HepG2EIF4B
TULP3ENSG00000078246.11493.24790382.462400.366902.150301.41450HepG2EWSR1
TULP3ENSG00000078246.111262.07140736.737500.776507.462006.26180HepG2FIP1L1
TULP3ENSG00000078246.11401.78260170.251601.238607.746006.46770HepG2FUBP3
TULP3ENSG00000078246.11538.82890383.420200.490802.356601.32220HepG2FUS
TULP3ENSG00000078246.11603.67950184.030701.7137023.8541022.04780HepG2FXR1
TULP3ENSG00000078246.11439.28170170.612701.3643013.6837012.26690HepG2G3BP1
TULP3ENSG00000078246.11381.02820181.261501.071706.473805.10260HepG2G3BP2
TULP3ENSG00000078246.11490.87640279.767200.811006.482105.11370HepG2GEMIN5
TULP3ENSG00000078246.11580.93290434.678100.418302.486201.82620HepG2HNRNPC
TULP3ENSG00000078246.11337.50580173.000700.964005.722904.74720HepG2HNRNPK
TULP3ENSG00000078246.11703.30700508.363700.468203.909602.79800HepG2HNRNPM
TULP3ENSG00000078246.11578.32450173.387501.7378024.1046022.35980HepG2IGF2BP2
TULP3ENSG00000078246.11567.95830162.863901.8020010.136908.35710HepG2IGF2BP3
TULP3ENSG00000078246.11647.70820441.079700.554207.052305.93850HepG2ILF2
TULP3ENSG00000078246.11417.82040174.466601.259809.873707.89230HepG2KHSRP
TULP3ENSG00000078246.11730.99820184.095801.9893033.3121031.24950HepG2MAGOH
TULP3ENSG00000078246.11429.67540185.094401.2149010.016608.87320HepG2MATR3
TULP3ENSG00000078246.11819.93240596.340900.459303.841102.89240HepG2MSI2
TULP3ENSG00000078246.11762.16140500.732000.606006.256504.44510HepG2NAA15
TULP3ENSG00000078246.11453.75380189.428601.2602010.278909.09810HepG2NCBP2
TULP3ENSG00000078246.11580.64870286.555601.018805.986504.64390HepG2PABPC1
TULP3ENSG00000078246.11406.05840168.579801.2682011.8533010.38590HepG2PABPC4
TULP3ENSG00000078246.11533.00290427.444500.318302.115201.36690HepG2PARN
TULP3ENSG00000078246.11569.02820183.148201.6354032.8866031.19440HepG2PCBP1
TULP3ENSG00000078246.11417.25820259.856700.683105.505503.78610HepG2PKM
TULP3ENSG00000078246.11613.13110381.516200.684403.960502.51510HepG2PRPF6
TULP3ENSG00000078246.11495.43410186.367501.4104022.1941020.92910HepG2PTBP1
TULP3ENSG00000078246.11801.70630533.451900.587606.823205.78680HepG2PUM2
TULP3ENSG00000078246.11534.90350398.644100.424103.633202.94750HepG2PUS1
TULP3ENSG00000078246.11368.74590201.824800.869404.810204.01980HepG2QKI
TULP3ENSG00000078246.11572.35380350.172500.708703.363602.58860HepG2RAVER1
TULP3ENSG00000078246.111059.13170740.171300.516903.965402.96090HepG2RBM15
TULP3ENSG00000078246.11718.78160517.300500.474504.588803.96550HepG2RBM22
TULP3ENSG00000078246.11440.05100183.175001.264305.780904.83860HepG2RBM25
TULP3ENSG00000078246.11636.08790207.403001.6167030.8929029.49950HepG2NELFE
TULP3ENSG00000078246.11518.59910193.178901.4246022.7885021.31720HepG2RECQL
TULP3ENSG00000078246.11458.30160305.772000.583704.114403.38010HepG2RPS19
TULP3ENSG00000078246.11938.72870699.833400.423601.953501.38450HepG2SF3A3
TULP3ENSG00000078246.11492.52200194.019401.3439019.7522018.40570HepG2SF3B4
TULP3ENSG00000078246.11567.99800448.482200.340702.048601.48250HepG2SMN1
TULP3ENSG00000078246.11581.75610357.430400.702704.662203.38770HepG2SMNDC1
TULP3ENSG00000078246.11693.61140202.519601.7760039.6611038.32730HepG2SRSF1
TULP3ENSG00000078246.11573.50780693.89860-0.274902.228801.59740HepG2SRSF7
TULP3ENSG00000078246.11359.42140164.765201.1252013.3504012.30020HepG2SRSF9
TULP3ENSG00000078246.11773.64370564.691600.454105.777504.93870HepG2SUCLG1
TULP3ENSG00000078246.11691.55560497.543700.474903.930202.82170HepG2SUPT6H
TULP3ENSG00000078246.11386.46970182.047601.085909.203608.27640HepG2TAF15
TULP3ENSG00000078246.11444.06970167.261001.4086019.2453017.11370HepG2TIA1
TULP3ENSG00000078246.11985.06820630.273000.644101.918501.38470HepG2U2AF1
TULP3ENSG00000078246.111680.03570835.489901.007703.188402.12720HepG2U2AF2
TULP3ENSG00000078246.11453.37020283.037400.679603.215002.13130HepG2UPF2
TULP3ENSG00000078246.11769.43290599.209100.360603.211302.57450HepG2UTP3
TULP3ENSG00000078246.11536.09800385.167400.476902.278401.32010HepG2XRCC6
TULP3ENSG00000078246.11918.76730682.591200.428605.804005.08760HepG2ZNF622
TULP3ENSG00000078246.11344.56500251.026800.456802.761401.45130K562BCCIP
TULP3ENSG00000078246.11447.83040261.348400.776906.153504.41150K562CCAR1
TULP3ENSG00000078246.11646.77410826.54160-0.353802.624301.67530K562CELF1
TULP3ENSG00000078246.11381.37480282.009200.435402.460301.48000K562DDX3X
TULP3ENSG00000078246.11588.91580773.87180-0.394003.892003.13800K562DDX47
TULP3ENSG00000078246.11429.99520292.555200.555502.671201.36700K562DHX30
TULP3ENSG00000078246.11421.81890309.738700.445503.070001.78370K562EIF2S1
TULP3ENSG00000078246.11367.29210257.168500.514103.212701.80100K562EWSR1
TULP3ENSG00000078246.111054.47060670.361400.653407.394105.76670K562MBNL1
TULP3ENSG00000078246.11456.32850294.209100.633104.991803.33460K562NCBP2
TULP3ENSG00000078246.11476.28610351.522900.438102.938101.54750K562PCBP1
TULP3ENSG00000078246.11407.00880275.773300.561503.767002.17820K562RBM25
TULP3ENSG00000078246.11552.99600347.789700.669005.423703.84440K562SRFBP1
TULP3ENSG00000078246.11831.40100591.758400.490406.088704.76450K562SRPK2
TULP3ENSG00000078246.11552.91010410.889500.428202.645801.72570K562TRIM56
TULP3ENSG00000078246.11826.74550620.694200.413504.293403.41750K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TULP3 is not available on ENCORE database.





1 RBPs can affect the splicing of TULP3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXETULP3ENSG00000078246.11chr12+30425833042696304361230437273040202304040630467963046895-0.423000.002660.085272includedHepG2DROSHA

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TULP3 is not avaliable on ENCORE database.