TIMM17B

General Information

Gene Name       : TIMM17B
Gene ID             : ENSG00000126768.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TIMM17B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TIMM17BENSG00000126768.1210.2725.6917.98ENCSR000AEF
HepG2TIMM17BENSG00000126768.1255.5034.5245.01ENCSR985KAT
K562TIMM17BENSG00000126768.12126.8894.44110.66ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TIMM17B is not avaliable on ENCORE database.



Proteins bound to RNA
  • TIMM17B RNA is bound by 11 proteins.  







eCLIP assay for TIMM17B is not avaliable on ENCORE database.





11 proteins are bound to TIMM17B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX4875138648751509-3'-UTR,CDS,intron-Distal,intron-Proximal4.341205.68852HepG2RPS3
chrX4875085548750905-3'-UTR,intron-Distal3.672168.21916K562YBX3
chrX4875092148750970-3'-UTR,intron-Distal4.8941711.18522HepG2LARP4
chrX4875104748751098-3'-UTR,CDS,intron-Distal,intron-Proximal5.312948.76030HepG2LARP4
chrX4875098248751047-3'-UTR,CDS,intron-Distal3.347668.50909HepG2LARP4
chrX4875231848752385-3'-UTR,CDS,intron-Distal,intron-Proximal4.379637.56262K562RPS3
chrX4875084648750900-3'-UTR,intron-Distal3.339574.27496K562PCBP1
chrX4875097648751103-3'-UTR,CDS,intron-Distal,intron-Proximal3.785286.95162HepG2RPS3
chrX4875097848751020-3'-UTR,CDS,intron-Distal4.713017.37833K562PABPC4
chrX4875092048750958-3'-UTR,intron-Distal4.393447.28182K562PABPC4
chrX4875075848750841-3'-UTR,intron-Distal,intron-Proximal3.748546.25903K562DDX6
chrX4875079548750837-3'-UTR,intron-Distal,intron-Proximal4.091314.91517HepG2LARP4
chrX4875229548752356-3'-UTR,CDS,intron-Distal,intron-Proximal4.818086.69228HepG2PRPF8
chrX4875143248751479-3'-UTR,CDS,intron-Distal3.462265.80891HepG2LARP4
chrX4875232548752381-3'-UTR,CDS,intron-Distal3.342175.28366HepG2LARP4
chrX4875085348750906-3'-UTR,intron-Distal5.572539.36006HepG2LARP4
chrX4875085448750899-3'-UTR,intron-Distal4.085158.05708K562PABPC4
chrX4875233948752385-3'-UTR,CDS,intron-Distal,intron-Proximal4.058923.15824K562FTO
chrX4875079848750839-3'-UTR,intron-Distal,intron-Proximal4.2137731.47933K562PABPC4
chrX4875137848751468-3'-UTR,CDS,intron-Distal,intron-Proximal4.371485.19234K562LIN28B
chrX4875093048751017-3'-UTR,CDS,intron-Distal5.390554.55547K562PCBP1
chrX4875500648755059-5'-UTR,CDS,intron-Distal,intron-Proximal3.480745.97131K562DDX3X
chrX4875493548755007-5'-UTR,intron-Distal,intron-Proximal4.784595.26064K562AQR
chrX4875404048754142-5'-UTR,CDS,intron-Distal,intron-Proximal3.2759014.80928K562DDX3X
chrX4875403948754101-CDS,intron-Distal,intron-Proximal3.559844.79053K562FTO
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TIMM17B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TIMM17B is not available on ENCORE database.

  • 84 RBPs can affect the levels of TIMM17B.  








The Knockdown/knockout RNA-Seq assay for TIMM17B is not available on ENCORE database.





84 RBPs can affect the gene expression of TIMM17B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TIMM17BENSG00000126768.8165.36150300.17430-0.860205.558804.08640HepG2AATF
TIMM17BENSG00000126768.8270.64150189.664000.512801.939001.35230HepG2CPSF6
TIMM17BENSG00000126768.8192.44670307.45630-0.675903.155001.67150HepG2CSTF2T
TIMM17BENSG00000126768.8835.29730609.095300.455505.955404.92600HepG2DAZAP1
TIMM17BENSG00000126768.8448.25270326.717100.456203.038301.82870HepG2DDX1
TIMM17BENSG00000126768.8230.02100324.04870-0.494402.561401.68510HepG2DDX24
TIMM17BENSG00000126768.81228.49740807.782600.604805.413604.56440HepG2DDX3X
TIMM17BENSG00000126768.8511.77030694.17980-0.439802.089001.54550HepG2DDX6
TIMM17BENSG00000126768.8621.56500320.361300.9561014.0557012.56800HepG2DNAJC21
TIMM17BENSG00000126768.8451.41530317.548800.507404.714803.90020HepG2DNAJC2
TIMM17BENSG00000126768.8653.93760844.88040-0.369603.952603.25550HepG2ETF1
TIMM17BENSG00000126768.8300.14200214.965900.481401.883901.34850HepG2GPKOW
TIMM17BENSG00000126768.8563.76380359.762200.647905.070204.15320HepG2HNRNPC
TIMM17BENSG00000126768.8506.02940699.18470-0.466502.444501.78590HepG2HNRNPK
TIMM17BENSG00000126768.8418.31300205.148901.027805.779504.90330HepG2HNRNPLL
TIMM17BENSG00000126768.8449.20470357.383300.329802.057601.52570HepG2HNRNPU
TIMM17BENSG00000126768.8573.22410448.966400.352402.526701.83420HepG2IGF2BP1
TIMM17BENSG00000126768.8520.75930365.054300.512405.047604.08250HepG2ILF2
TIMM17BENSG00000126768.8633.98230467.006700.440902.263901.52020HepG2LARP4
TIMM17BENSG00000126768.8534.28780744.30980-0.478302.186801.60190HepG2MAGOH
TIMM17BENSG00000126768.8489.92160748.40990-0.611303.377902.68730HepG2MATR3
TIMM17BENSG00000126768.8747.12610603.978800.306802.123601.45380HepG2NOL12
TIMM17BENSG00000126768.8581.80230705.27810-0.277702.015301.48450HepG2PCBP1
TIMM17BENSG00000126768.8458.00760318.756400.522804.231303.34010HepG2PPIL4
TIMM17BENSG00000126768.8493.39100717.68050-0.540605.430904.71890HepG2PTBP1
TIMM17BENSG00000126768.8797.10130576.557000.467203.908303.21310HepG2PUF60
TIMM17BENSG00000126768.8512.77440355.569600.528102.320901.35230HepG2RCC2
TIMM17BENSG00000126768.8510.09440798.68150-0.646908.020607.18440HepG2NELFE
TIMM17BENSG00000126768.8507.00470743.91410-0.553104.585603.81910HepG2RECQL
TIMM17BENSG00000126768.8550.04070318.262400.7892010.457709.32940HepG2SAFB2
TIMM17BENSG00000126768.8676.35940499.239900.438002.285701.67190HepG2SF3A3
TIMM17BENSG00000126768.8569.41990747.13760-0.391903.394302.74770HepG2SF3B4
TIMM17BENSG00000126768.8492.40850371.142300.407803.248702.56060HepG2SMN1
TIMM17BENSG00000126768.8321.81170114.320601.493003.261201.81380HepG2SNRNP200
TIMM17BENSG00000126768.8333.83830225.922100.563202.052001.38340HepG2SNRNP70
TIMM17BENSG00000126768.8660.65480797.55870-0.271702.305301.83450HepG2SRFBP1
TIMM17BENSG00000126768.8586.25120779.87460-0.411703.909403.37120HepG2SRSF1
TIMM17BENSG00000126768.8165.95990569.27480-1.7783035.8037033.91350HepG2SRSF5
TIMM17BENSG00000126768.8473.09510634.49080-0.423503.909803.27680HepG2SRSF9
TIMM17BENSG00000126768.8646.88890464.969500.476303.436702.39740HepG2SUPT6H
TIMM17BENSG00000126768.8381.89120701.05010-0.8764012.0710011.02790HepG2TAF15
TIMM17BENSG00000126768.8294.36160200.044000.557202.645901.93450HepG2TARDBP
TIMM17BENSG00000126768.8515.00980347.244100.568504.860304.23560HepG2TIAL1
TIMM17BENSG00000126768.8496.81000350.370300.503704.607903.91770HepG2TRIM56
TIMM17BENSG00000126768.8730.02570563.283800.374002.682501.82390HepG2TUFM
TIMM17BENSG00000126768.8598.63800942.39180-0.654606.027604.21730K562AARS
TIMM17BENSG00000126768.82421.583601626.006200.5745013.5199012.36800K562AGGF1
TIMM17BENSG00000126768.82505.275401786.683600.487605.849404.29200K562AKAP8
TIMM17BENSG00000126768.82621.105601691.920500.631404.723103.86230K562AKAP8L
TIMM17BENSG00000126768.81684.913502171.40990-0.366004.382503.14720K562CELF1
TIMM17BENSG00000126768.81096.32480892.543300.296602.284001.34170K562DDX3X
TIMM17BENSG00000126768.8383.62450871.04800-1.183105.173302.28100K562DDX55
TIMM17BENSG00000126768.8767.328001034.37050-0.430803.080001.66360K562DNAJC21
TIMM17BENSG00000126768.81271.60130792.649000.681805.262803.45930K562EEF2
TIMM17BENSG00000126768.81605.124101213.907100.402905.474404.51330K562EIF2S2
TIMM17BENSG00000126768.81032.78530813.958000.343403.068701.69140K562EWSR1
TIMM17BENSG00000126768.81445.37880810.174900.8350012.8648010.90150K562FIP1L1
TIMM17BENSG00000126768.8339.78550895.40120-1.3979021.5043018.25570K562FKBP4
TIMM17BENSG00000126768.882.14770365.33090-2.1529020.7990018.32530K562G3BP2
TIMM17BENSG00000126768.82004.990501617.666300.309602.751101.99680K562GRSF1
TIMM17BENSG00000126768.8774.000801448.63530-0.904307.186305.51840K562HNRNPA1
TIMM17BENSG00000126768.81612.22930948.269000.765603.595202.14070K562HNRNPA2B1
TIMM17BENSG00000126768.81119.75010666.471900.748507.763506.08000K562HNRNPM
TIMM17BENSG00000126768.81121.490701604.42080-0.516603.177302.22260K562HNRNPU
TIMM17BENSG00000126768.81681.741801098.296900.614604.285303.30140K562HSPD1
TIMM17BENSG00000126768.8675.38920971.21930-0.524104.461102.57410K562KHDRBS1
TIMM17BENSG00000126768.81489.746401045.818400.510304.714602.69570K562LIN28B
TIMM17BENSG00000126768.81311.91060919.503800.512605.420503.17870K562LSM11
TIMM17BENSG00000126768.82299.713501718.790200.420004.139502.74410K562MAK16
TIMM17BENSG00000126768.8974.21120776.179900.327702.303401.46810K562MATR3
TIMM17BENSG00000126768.82067.11910829.164001.317809.866907.59990K562PABPN1
TIMM17BENSG00000126768.81333.996801006.585800.406203.934202.19150K562PHF6
TIMM17BENSG00000126768.81457.97890919.840600.664404.067903.04910K562PPIG
TIMM17BENSG00000126768.82117.91580985.486201.103605.868003.49910K562PPP1R8
TIMM17BENSG00000126768.81264.85660924.363400.452303.914502.81070K562PSIP1
TIMM17BENSG00000126768.8983.27650755.764900.379602.923002.24300K562PTBP1
TIMM17BENSG00000126768.81593.903202049.44890-0.362704.250702.90470K562PUM1
TIMM17BENSG00000126768.82622.579501678.011600.644102.724702.18460K562PUS1
TIMM17BENSG00000126768.82336.351301634.894400.515008.472607.45990K562RBM15
TIMM17BENSG00000126768.81243.85200843.502800.560306.625405.08850K562RCC2
TIMM17BENSG00000126768.81643.10230758.117201.115805.562803.66920K562SF1
TIMM17BENSG00000126768.8528.98730379.714000.478203.722502.72620K562SF3B4
TIMM17BENSG00000126768.81667.80370923.974600.851903.942702.27470K562SFPQ
TIMM17BENSG00000126768.81447.54310870.922600.732902.546601.38770K562SNRNP200
TIMM17BENSG00000126768.81282.26960799.603500.681208.419706.35660K562SRFBP1
TIMM17BENSG00000126768.81042.144001256.34180-0.269703.003302.03450K562SRPK2
TIMM17BENSG00000126768.81031.76010699.940200.559702.754501.70840K562SRSF5
TIMM17BENSG00000126768.8401.32660529.67430-0.400303.022101.67490K562SSB
TIMM17BENSG00000126768.8512.86990834.58820-0.702503.254101.47710K562STIP1
TIMM17BENSG00000126768.8178.32500358.60150-1.007903.111701.52840K562TAF15
TIMM17BENSG00000126768.81181.88290749.769000.656504.178203.30340K562TARDBP
TIMM17BENSG00000126768.81222.28520723.272400.756906.154204.86310K562TIA1
TIMM17BENSG00000126768.81120.19720710.065300.657605.337203.70620K562TRA2A
TIMM17BENSG00000126768.81414.60250944.674800.582406.790105.15850K562TRIM56
TIMM17BENSG00000126768.8235.65270365.60170-0.633604.608203.57820K562U2AF2
TIMM17BENSG00000126768.8991.675301317.63450-0.410005.849304.84880K562UPF1
TIMM17BENSG00000126768.81342.010701778.94430-0.406604.008202.93610K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TIMM17B is not available on ENCORE database.





18 RBPs can affect the splicing of TIMM17B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETIMM17BENSG00000126768.8chrX-4875263448752784487523204875238448754041487541410.123000.000030.01129includedK562HNRNPA1
SETIMM17BENSG00000126768.8chrX-487526344875278448752320487523844875404148754141-0.106000.000290.01920excludedHepG2PTBP1
SETIMM17BENSG00000126768.8chrX-487526344875278448752320487523844875404148754141-0.069000.000200.01485excludedK562EFTUD2
SETIMM17BENSG00000126768.8chrX-4875263448752737487523204875238448754041487541410.170000.000320.00895includedK562U2AF1
SETIMM17BENSG00000126768.8chrX-487526344875278448752320487523844875404148754141-0.102000.000290.00928excludedHepG2SRSF1
SETIMM17BENSG00000126768.8chrX-487526344875278448752320487523844875404148754141-0.091000.000350.03046excludedHepG2TIAL1
SETIMM17BENSG00000126768.8chrX-4875263448752784487523204875238448754041487541410.247000.000000.00011includedK562U2AF2
SETIMM17BENSG00000126768.8chrX-487526344875278448752320487523844875404148754141-0.071000.000730.02922excludedK562TARDBP
SETIMM17BENSG00000126768.8chrX-4875263448752784487523204875238448754041487541410.113000.000020.00187includedK562HNRNPU
SETIMM17BENSG00000126768.8chrX-4875263448752784487523204875238448754041487541410.083000.002250.08241includedK562HNRNPK
SETIMM17BENSG00000126768.8chrX-487526344875325548752320487523844875404148754141-0.077000.000630.09076excludedK562NPM1
SETIMM17BENSG00000126768.8chrX-487526344875278448752320487523844875404148754141-0.161000.000190.00476excludedK562HNRNPC
A3SSTIMM17BENSG00000126768.8chrX-4875263448753255487526344875278448754041487541410.119000.000110.01410longerHepG2HNRNPK
A3SSTIMM17BENSG00000126768.8chrX-4875263448753255487526344875278448754041487541410.108000.000030.01990longerHepG2IGF2BP3
A3SSTIMM17BENSG00000126768.8chrX-4875263448753255487526344875278448754041487541410.189000.000000.00109longerHepG2NCBP2
A3SSTIMM17BENSG00000126768.8chrX-4875232048752474487523204875238448752634487528200.070000.005520.03155longerK562AQR
A3SSTIMM17BENSG00000126768.8chrX-4875263448753255487526344875278448754041487541410.188000.000000.00005longerK562AQR
A3SSTIMM17BENSG00000126768.8chrX-4875263448753255487526344875278448754041487541410.133000.000030.01171longerK562TARDBP
RITIMM17BENSG00000126768.8chrX-4875118248751508487511824875129348751379487515080.082000.000070.00136includedHepG2TAF15
RITIMM17BENSG00000126768.8chrX-4875118248751508487511824875129348751379487515080.062000.000020.00538includedK562FTO
RITIMM17BENSG00000126768.8chrX-4875118248751508487511824875129348751379487515080.057000.002440.02584includedHepG2RBM22
RITIMM17BENSG00000126768.8chrX-4875118248751508487511824875129348751379487515080.098000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TIMM17B is not avaliable on ENCORE database.