TAPT1

General Information

Gene Name       : TAPT1
Gene ID             : ENSG00000169762.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TAPT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TAPT1ENSG00000169762.168.108.998.54ENCSR000AEF
HepG2TAPT1ENSG00000169762.169.7014.9012.30ENCSR985KAT
K562TAPT1ENSG00000169762.1613.3913.9213.66ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TAPT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TAPT1 RNA is bound by 16 proteins.  







eCLIP assay for TAPT1 is not avaliable on ENCORE database.





16 proteins are bound to TAPT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr41619293616193002-3'-UTR,CDS,intron-Distal,intron-Proximal4.294907.79098HepG2PRPF8
chr41617577416175873-3'-UTR,CDS,intron-Distal,intron-Proximal3.627143.76553K562PRPF8
chr41616838416168480-3'-UTR,CDS,intron-Distal,intron-Proximal5.629718.42776K562SF3B4
chr41616379316163900-3'-UTR,intron-Distal4.222363.84437HepG2PRPF4
chr41616374916163955-3'-UTR,intron-Distal4.208034.20997HepG2UPF1
chr41619309216193147-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.723045.23259HepG2BCLAF1
chr41616373016163873-3'-UTR,intron-Distal4.146904.13641K562TARDBP
chr41616380216163929-3'-UTR,intron-Distal3.927714.14602K562FUS
chr41618116216181245-3'-UTR,CDS,intron-Distal,intron-Proximal4.288114.21433K562PRPF8
chr41618115716181223-3'-UTR,CDS,intron-Distal,intron-Proximal5.106565.58842K562EFTUD2
chr41617629216176366-3'-UTR,CDS,intron-Distal,intron-Proximal3.221994.26865K562U2AF2
chr41616372116163786-3'-UTR,intron-Distal3.175773.47685K562EIF4G2
chr41617773716177771-3'-UTR,CDS,intron-Distal,intron-Proximal5.337117.17304K562KHSRP
chr41616372816163793-3'-UTR,intron-Distal4.545377.89119K562UPF1
chr41616379316163878-3'-UTR,intron-Distal4.018158.62096K562UPF1
chr41617629816176366-3'-UTR,CDS,intron-Distal,intron-Proximal3.888534.77518HepG2U2AF2
chr41617579916175879-3'-UTR,CDS,intron-Distal,intron-Proximal5.972746.69228HepG2PRPF8
chr41616381216163877-3'-UTR,intron-Distal3.992383.02525HepG2GRSF1
chr41622797016228100-5'-UTR,CDS,intron-Distal,intron-Proximal3.914946.62281HepG2NCBP2
chr41622796616228086-5'-UTR,CDS,intron-Distal,intron-Proximal4.298633.80401K562SRSF1
chr41621543416215535-CDS,intron-Distal,intron-Proximal4.584215.52476K562BUD13
chr41621547116215546-CDS,intron-Distal,intron-Proximal4.728116.04961K562U2AF2
chr41620408116204127-CDS,intron-Distal,intron-Proximal3.461593.27569HepG2BCLAF1
chr41617770216177737-intron-Distal,intron-Proximal3.867785.96041K562KHSRP
chr41619293816192984-intron-Distal,intron-Proximal3.560863.94787K562AQR
chr41622048216220614-intron-Distal3.394033.28806K562KHSRP
chr41617637816176530-intron-Distal,intron-Proximal3.618645.78064K562KHSRP
chr41621555816215619-intron-Distal,intron-Proximal3.505234.10408K562KHSRP
chr41622787316227882-intron-Distal3.625854.88100K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TAPT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TAPT1 is not available on ENCORE database.

  • 65 RBPs can affect the levels of TAPT1.  








The Knockdown/knockout RNA-Seq assay for TAPT1 is not available on ENCORE database.





65 RBPs can affect the gene expression of TAPT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TAPT1ENSG00000169762.12264.78240393.10700-0.570103.593102.37860HepG2AATF
TAPT1ENSG00000169762.12391.64590599.59440-0.614404.163003.02480HepG2ABCF1
TAPT1ENSG00000169762.12341.20440543.77210-0.672408.004107.07880HepG2ACO1
TAPT1ENSG00000169762.12492.634801034.71810-1.0706012.1521011.11570HepG2AKAP1
TAPT1ENSG00000169762.12481.54670856.13550-0.830208.609907.27630HepG2ASCC1
TAPT1ENSG00000169762.121049.00190692.441200.599209.768008.60960HepG2AUH
TAPT1ENSG00000169762.12508.64860375.707000.437002.450901.60610HepG2BCLAF1
TAPT1ENSG00000169762.12576.65280442.606700.381602.210401.67030HepG2BOP1
TAPT1ENSG00000169762.12404.24630543.70170-0.427603.870203.10900HepG2CKAP4
TAPT1ENSG00000169762.12992.98890669.507300.568603.040702.23530HepG2CNOT7
TAPT1ENSG00000169762.12389.45730683.43380-0.811307.171406.22860HepG2CELF1
TAPT1ENSG00000169762.12392.80010502.93330-0.356602.838701.99480HepG2DDX19B
TAPT1ENSG00000169762.12587.11670851.46760-0.536303.629402.93000HepG2DDX6
TAPT1ENSG00000169762.12604.15790880.71310-0.543703.135202.40610HepG2EIF4B
TAPT1ENSG00000169762.12989.88650794.964500.316303.034302.40930HepG2ETF1
TAPT1ENSG00000169762.12324.66160531.40490-0.710906.624405.33330HepG2EWSR1
TAPT1ENSG00000169762.12357.45730540.57600-0.596703.246502.03420HepG2FUS
TAPT1ENSG00000169762.12666.85470912.67750-0.452703.194402.45210HepG2FXR1
TAPT1ENSG00000169762.12686.59370898.82570-0.388602.510301.66450HepG2G3BP2
TAPT1ENSG00000169762.12440.79930619.79500-0.491702.397801.36000HepG2GRSF1
TAPT1ENSG00000169762.12255.64130473.97910-0.890707.969606.95680HepG2HNRNPA1
TAPT1ENSG00000169762.12535.01580378.688200.498504.428503.54490HepG2HNRNPF
TAPT1ENSG00000169762.12511.43120857.33690-0.745307.649406.53240HepG2HNRNPK
TAPT1ENSG00000169762.12420.20070669.67330-0.672404.949704.06820HepG2HNRNPL
TAPT1ENSG00000169762.12872.74320439.546200.9894011.9975010.80260HepG2HNRNPLL
TAPT1ENSG00000169762.12369.10120523.74320-0.504804.727603.95260HepG2HNRNPU
TAPT1ENSG00000169762.12558.85940372.899300.583604.934603.99330HepG2IGF2BP1
TAPT1ENSG00000169762.12615.41870860.55700-0.483703.463502.71620HepG2IGF2BP2
TAPT1ENSG00000169762.12475.37690758.83120-0.674704.723003.63060HepG2LARP4
TAPT1ENSG00000169762.12588.88500411.442500.517204.020402.55750HepG2NAA15
TAPT1ENSG00000169762.12555.04740728.89560-0.393102.534601.80570HepG2NOL12
TAPT1ENSG00000169762.12490.95950819.84810-0.7398010.024108.98420HepG2PCBP1
TAPT1ENSG00000169762.12540.60680402.645900.425003.519602.65690HepG2PRPF4
TAPT1ENSG00000169762.12235.37390695.73230-1.5636015.5696014.31080HepG2PUF60
TAPT1ENSG00000169762.12574.72780738.47750-0.361702.419201.85720HepG2PUM1
TAPT1ENSG00000169762.12950.66660553.874200.7793015.1629013.92470HepG2PUS1
TAPT1ENSG00000169762.12985.41540493.839400.996607.078505.97840HepG2RAVER1
TAPT1ENSG00000169762.12505.02870928.39810-0.8784012.6048011.60560HepG2NELFE
TAPT1ENSG00000169762.12525.88960864.59430-0.717309.161308.13870HepG2RECQL
TAPT1ENSG00000169762.12642.49140407.947100.655205.491404.57610HepG2RPLP0
TAPT1ENSG00000169762.12797.21580485.095500.716604.642503.43040HepG2RPS10
TAPT1ENSG00000169762.12336.15810466.40710-0.472403.877703.13710HepG2SAFB2
TAPT1ENSG00000169762.12887.28880639.828200.471602.749402.07710HepG2SF3A3
TAPT1ENSG00000169762.12578.68180435.051600.411502.413001.75220HepG2SF3B1
TAPT1ENSG00000169762.12638.64520868.57810-0.443604.624503.89000HepG2SF3B4
TAPT1ENSG00000169762.12424.56620543.89370-0.357302.964202.30170HepG2SMN1
TAPT1ENSG00000169762.12708.02950906.56750-0.356602.805002.32910HepG2SRSF1
TAPT1ENSG00000169762.12600.25770372.050300.690008.297807.20370HepG2SRSF7
TAPT1ENSG00000169762.12534.75580737.50650-0.463803.604602.99320HepG2SRSF9
TAPT1ENSG00000169762.12805.26860651.639800.305302.814202.29860HepG2SSB
TAPT1ENSG00000169762.12579.91140781.20890-0.429902.830702.20340HepG2SUCLG1
TAPT1ENSG00000169762.12690.28490428.478200.687906.201205.17690HepG2TARDBP
TAPT1ENSG00000169762.12266.02050508.85470-0.9357010.848109.97090HepG2TIAL1
TAPT1ENSG00000169762.12320.81460513.46750-0.678506.575005.77130HepG2TRIM56
TAPT1ENSG00000169762.12732.14750517.900100.499403.382502.69330HepG2U2AF1
TAPT1ENSG00000169762.12319.36100547.83070-0.778509.122208.13840HepG2UTP3
TAPT1ENSG00000169762.12293.05840416.57420-0.507402.284201.61990HepG2XRN2
TAPT1ENSG00000169762.12534.57800397.347000.427903.076802.37650HepG2ZC3H8
TAPT1ENSG00000169762.12748.56630624.063900.262302.257401.74810HepG2ZNF622
TAPT1ENSG00000169762.12611.65730460.661800.408902.350101.55250K562BOP1
TAPT1ENSG00000169762.12721.85190530.111800.445304.252303.38960K562EIF2S2
TAPT1ENSG00000169762.12444.83600605.59520-0.445102.601202.01050K562FXR1
TAPT1ENSG00000169762.12915.59750626.773900.546703.508702.69270K562G3BP2
TAPT1ENSG00000169762.12484.02720706.42670-0.545504.456603.50130K562GRSF1
TAPT1ENSG00000169762.12456.63450702.41260-0.621306.125704.48900K562HNRNPL
TAPT1ENSG00000169762.12425.12090621.08800-0.546905.409004.14750K562HNRNPU
TAPT1ENSG00000169762.12920.77500724.267700.346202.243201.52350K562HSPD1
TAPT1ENSG00000169762.121176.50590766.000400.619004.765903.50880K562NAA15
TAPT1ENSG00000169762.12562.59370742.08860-0.399503.229602.51820K562PTBP1
TAPT1ENSG00000169762.12595.146001134.01500-0.9301011.8398010.14070K562PUF60
TAPT1ENSG00000169762.121372.22670911.534500.590006.308305.52700K562PUS1
TAPT1ENSG00000169762.12905.38660597.974900.598303.067601.56520K562RAVER1
TAPT1ENSG00000169762.121152.72060888.261800.375904.119103.41220K562RBM15
TAPT1ENSG00000169762.12478.56700711.51930-0.572205.068303.89160K562RBM22
TAPT1ENSG00000169762.12682.12090525.548300.376103.052101.69820K562SSB
TAPT1ENSG00000169762.12914.87350607.327000.591004.419102.97100K562U2AF1
TAPT1ENSG00000169762.12804.37990627.308800.358602.815002.00430K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TAPT1 is not available on ENCORE database.





13 RBPs can affect the splicing of TAPT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETAPT1ENSG00000169762.12chr4-1617227516172352161682551616841616175826161758950.211000.001380.02721includedK562SRSF1
SETAPT1ENSG00000169762.12chr4-161722751617235216168255161684161617582616175895-0.278000.000010.00105excludedK562AKAP8L
SETAPT1ENSG00000169762.12chr4-1617227516172352161682551616841616175826161758950.343000.000580.02538includedK562FXR1
SETAPT1ENSG00000169762.12chr4-161722751617235216168255161684161617582616175895-0.392000.000000.00000excludedK562PUS1
SETAPT1ENSG00000169762.12chr4-161722751617235216168255161684161617582616175895-0.362000.000320.02122excludedK562EFTUD2
SETAPT1ENSG00000169762.12chr4-161722751617235216168255161684161617582616175895-0.184000.000590.05053excludedHepG2DDX6
SETAPT1ENSG00000169762.12chr4-161722751617235216168255161684161617582616175895-0.283000.000340.02871excludedK562HNRNPL
SETAPT1ENSG00000169762.12chr4-161722751617235216168255161684161617582616175895-0.146000.001000.03076excludedHepG2SF3A3
SETAPT1ENSG00000169762.12chr4-161722751617235216168255161684161617582616175895-0.288000.001450.04512excludedK562UTP18
SETAPT1ENSG00000169762.12chr4-161722751617235216168255161684161617582616175895-0.413000.000000.00000excludedK562RBM15
SETAPT1ENSG00000169762.12chr4-161722751617235216168255161684161617582616175895-0.358000.000000.00000excludedK562AGGF1
SETAPT1ENSG00000169762.12chr4-1617227516172352161682551616841616175826161758950.226000.000200.04843includedK562SAFB
SETAPT1ENSG00000169762.12chr4-161722751617235216168255161684161617582616175895-0.338000.001190.02223excludedK562HNRNPC
A5SSTAPT1ENSG00000169762.12chr4-161777411617785116177816161778511617629216176352-0.123000.002640.08418shorterK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TAPT1 is not avaliable on ENCORE database.