TAF11

General Information

Gene Name       : TAF11
Gene ID             : ENSG00000064995.17
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TAF11)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TAF11ENSG00000064995.1727.5029.2528.38ENCSR000AEF
HepG2TAF11ENSG00000064995.1740.0859.4949.78ENCSR985KAT
K562TAF11ENSG00000064995.1748.7749.9449.36ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TAF11 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TAF11 RNA is bound by 9 proteins.  







eCLIP assay for TAF11 is not avaliable on ENCORE database.





9 proteins are bound to TAF11 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr63484597634846028-3'-UTR,intron-Distal4.5922412.29308HepG2SUB1
chr63485563234855805-5'-UTR,CDS,intron-Distal3.249778.57720K562DDX3X
chr63485549734855584-CDS,intron-Distal4.066314.15711K562AQR
chr63484648134846543-CDS,intron-Distal5.195695.90023K562SF3B4
chr63485061834850711-CDS,intron-Distal,intron-Proximal4.384434.21433K562PRPF8
chr63485555334855635-CDS,intron-Distal3.114895.57447HepG2GRWD1
chr63484861034848696-intron-Distal3.046665.85121K562KHSRP
chr63484852534848610-intron-Distal4.2430110.04635K562KHSRP
chr63484792634847975-intron-Distal,intron-Proximal4.207304.54401K562KHSRP
chr63484885634848918-intron-Distal3.950793.25538K562KHSRP
chr63485214934852245-intron-Distal5.0716418.27778HepG2PCBP2
chr63484663034846719-intron-Distal4.998327.58902K562KHSRP
chr63484877434848839-intron-Distal4.892646.39049HepG2U2AF2
chr63484856234848715-intron-Distal3.354536.16966HepG2KHSRP
chr63484786634847926-intron-Distal,intron-Proximal3.356817.08481K562KHSRP
chr63484848034848525-intron-Distal3.152833.90146K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TAF11 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TAF11 is not available on ENCORE database.

  • 71 RBPs can affect the levels of TAF11.  








The Knockdown/knockout RNA-Seq assay for TAF11 is not available on ENCORE database.





71 RBPs can affect the gene expression of TAF11 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TAF11ENSG00000064995.12656.31850774.68020-0.239201.866501.34900HepG2ACO1
TAF11ENSG00000064995.12297.95050645.13800-1.1145013.6694011.71070HepG2ADAR
TAF11ENSG00000064995.122065.204301388.725000.572405.029304.33830HepG2AKAP1
TAF11ENSG00000064995.12419.375101149.10830-1.4542011.500009.98280HepG2ASCC1
TAF11ENSG00000064995.12493.79690706.81300-0.517403.306602.32500HepG2BCLAF1
TAF11ENSG00000064995.12777.13880531.529900.547904.618603.86920HepG2BOP1
TAF11ENSG00000064995.12541.04780678.92800-0.327502.115801.43470HepG2CALR
TAF11ENSG00000064995.12516.45540961.94200-0.897303.517702.40550HepG2CCAR1
TAF11ENSG00000064995.12605.87650774.44730-0.354103.644402.89890HepG2CKAP4
TAF11ENSG00000064995.12318.48660487.96360-0.615504.349203.50350HepG2CPSF6
TAF11ENSG00000064995.12472.94060614.29930-0.377302.456901.41810HepG2CPSF7
TAF11ENSG00000064995.121833.664801330.411300.462803.919403.18630HepG2DDX3X
TAF11ENSG00000064995.12383.62240799.75570-1.0599010.861609.44910HepG2DDX55
TAF11ENSG00000064995.12844.206201142.57340-0.436602.657202.05190HepG2DDX6
TAF11ENSG00000064995.12483.42440626.56560-0.374202.390001.47810HepG2DHX30
TAF11ENSG00000064995.12920.95930741.142400.313302.854402.16710HepG2DKC1
TAF11ENSG00000064995.12546.350101098.65890-1.007808.120907.14310HepG2EIF2S1
TAF11ENSG00000064995.12324.22400565.87460-0.803508.404206.51150HepG2EIF2S2
TAF11ENSG00000064995.12334.254401182.01820-1.8222018.1760016.51860HepG2EIF4B
TAF11ENSG00000064995.12913.081501358.48700-0.573209.519808.51380HepG2ETF1
TAF11ENSG00000064995.12985.23820756.943700.380203.147002.25860HepG2EWSR1
TAF11ENSG00000064995.12499.55000753.30650-0.592603.817802.92620HepG2FIP1L1
TAF11ENSG00000064995.12238.88560488.82030-1.033004.304303.04110HepG2FTO
TAF11ENSG00000064995.12490.72250760.93320-0.632906.242605.08910HepG2FUBP3
TAF11ENSG00000064995.12823.966901136.35190-0.463802.635801.98570HepG2G3BP1
TAF11ENSG00000064995.12547.353501105.25090-1.0138022.6842020.54400HepG2HNRNPA2B1
TAF11ENSG00000064995.12373.46880734.34920-0.975505.896504.26170HepG2NONO
TAF11ENSG00000064995.12668.606601123.40770-0.748705.142104.17040HepG2PABPC4
TAF11ENSG00000064995.12558.20250717.32930-0.361803.196502.29340HepG2PARN
TAF11ENSG00000064995.12750.623601149.99750-0.6155010.543709.48250HepG2PCBP1
TAF11ENSG00000064995.12915.704801170.17560-0.353803.890403.26600HepG2PTBP1
TAF11ENSG00000064995.121027.144701208.44430-0.234502.419501.85740HepG2PUM1
TAF11ENSG00000064995.121004.010101207.54080-0.266301.947501.37830HepG2PUM2
TAF11ENSG00000064995.12989.37250789.052600.326303.555702.87580HepG2PUS1
TAF11ENSG00000064995.12996.980101267.30750-0.346103.342502.66540HepG2QKI
TAF11ENSG00000064995.121041.57930691.240100.591402.945702.21990HepG2RAVER1
TAF11ENSG00000064995.121348.533001135.454100.248002.242001.76210HepG2RBM22
TAF11ENSG00000064995.12793.132201150.17120-0.536205.937604.98370HepG2RBM25
TAF11ENSG00000064995.121054.165101302.28470-0.304903.197002.62410HepG2NELFE
TAF11ENSG00000064995.12919.733101212.91650-0.399204.959304.16460HepG2RECQL
TAF11ENSG00000064995.12448.24260610.32990-0.445302.287801.56620HepG2RRP9
TAF11ENSG00000064995.12869.748301218.28570-0.486206.874806.00890HepG2SF3B4
TAF11ENSG00000064995.12361.68100694.69010-0.941702.921501.56720HepG2SNRNP200
TAF11ENSG00000064995.121777.633201282.471800.470909.040008.27750HepG2SRFBP1
TAF11ENSG00000064995.12269.37750562.20720-1.061508.767806.90340HepG2SRSF3
TAF11ENSG00000064995.12809.273301123.99680-0.473906.269705.38080HepG2SRSF5
TAF11ENSG00000064995.12789.912701034.54830-0.389204.781504.09300HepG2SRSF9
TAF11ENSG00000064995.121334.264801113.521100.260802.877102.35670HepG2SSB
TAF11ENSG00000064995.12986.760201278.25970-0.373405.004604.21050HepG2SUCLG1
TAF11ENSG00000064995.12383.72400514.56440-0.423302.416801.73270HepG2TARDBP
TAF11ENSG00000064995.12799.111401050.25300-0.394303.543002.60100HepG2TIA1
TAF11ENSG00000064995.12564.58310704.20430-0.318802.276601.81430HepG2TIAL1
TAF11ENSG00000064995.12479.83880710.46360-0.566207.049906.22180HepG2TRIM56
TAF11ENSG00000064995.12434.09550807.79300-0.896002.526001.58700HepG2U2AF2
TAF11ENSG00000064995.12526.93220740.31910-0.490505.165104.25830HepG2UPF1
TAF11ENSG00000064995.12491.87980714.74550-0.539106.077605.24870HepG2UTP3
TAF11ENSG00000064995.12260.69640525.95750-1.012604.621702.38000K562ADAR
TAF11ENSG00000064995.121040.39590862.380200.270602.252101.73170K562AGGF1
TAF11ENSG00000064995.121551.405801877.56610-0.275301.874901.37410K562AQR
TAF11ENSG00000064995.12289.02570515.02620-0.833407.787205.77620K562CCAR1
TAF11ENSG00000064995.12939.179001432.78950-0.6094010.423608.28370K562CPEB4
TAF11ENSG00000064995.121094.261101508.53510-0.463206.812105.75800K562EIF2S2
TAF11ENSG00000064995.12515.72980696.24070-0.433004.020102.58380K562EIF4B
TAF11ENSG00000064995.121226.38330804.023300.609009.757808.70310K562FXR1
TAF11ENSG00000064995.12673.97960944.43720-0.486704.403203.66760K562HNRNPC
TAF11ENSG00000064995.12627.40280843.30970-0.426703.239301.99500K562HNRNPF
TAF11ENSG00000064995.121152.09660828.720700.475203.597802.52400K562HNRNPM
TAF11ENSG00000064995.12409.21550577.90450-0.498002.545601.65350K562KRR1
TAF11ENSG00000064995.121004.22850747.787800.425302.269801.49020K562NAA15
TAF11ENSG00000064995.12984.500601189.89650-0.273403.194102.39670K562NSUN2
TAF11ENSG00000064995.121552.657801143.769000.440803.072702.20140K562PPIG
TAF11ENSG00000064995.121340.974301002.756700.419204.415203.59580K562PTBP1
TAF11ENSG00000064995.121245.74260890.019700.485003.766703.14700K562PUS1
TAF11ENSG00000064995.12569.14820772.46550-0.440703.631702.49640K562RCC2
TAF11ENSG00000064995.12482.19250732.28690-0.602805.131503.60830K562SRFBP1
TAF11ENSG00000064995.12650.28700873.31000-0.425402.568801.59340K562SUPV3L1
TAF11ENSG00000064995.12619.18410814.45960-0.395502.384401.52010K562TIAL1
TAF11ENSG00000064995.12600.98440865.14740-0.525604.678603.37370K562TRIM56
TAF11ENSG00000064995.12714.442001079.57130-0.595607.114805.67070K562WDR3
TAF11ENSG00000064995.121735.565402115.29570-0.285502.375001.58470K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TAF11 is not available on ENCORE database.





16 RBPs can affect the splicing of TAF11 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETAF11ENSG00000064995.12chr6-348477433484784034845554348464973484806534848153-0.217000.000000.00000excludedK562SF3B4
SETAF11ENSG00000064995.12chr6-348477433484784034845554348464973484806534848153-0.202000.000000.00000excludedK562PRPF8
SETAF11ENSG00000064995.12chr6-348477433484784034845554348464973484806534848122-0.108000.004920.07506excludedHepG2U2AF1
SETAF11ENSG00000064995.12chr6-348477433484784034845554348464973484806534848153-0.091000.000050.00281excludedK562AKAP8L
SETAF11ENSG00000064995.12chr6-348477433484784034845554348464973484806534848153-0.327000.000000.00000excludedHepG2U2AF2
SETAF11ENSG00000064995.12chr6-348477433484784034845554348464973484806534848153-0.065000.002320.03395excludedK562PUS1
SETAF11ENSG00000064995.12chr6-348477433484784034845554348464973484806534848153-0.129000.000010.00168excludedK562EFTUD2
SETAF11ENSG00000064995.12chr6-348477433484784034845554348464973484806534848173-0.123000.000010.00078excludedHepG2SF3A3
SETAF11ENSG00000064995.12chr6-348480653484815334845749348464973485070834850857-0.085000.000020.00330excludedK562HNRNPUL1
SETAF11ENSG00000064995.12chr6-348477433484784034845554348464973485070834850857-0.157000.000540.02156excludedK562UTP18
SETAF11ENSG00000064995.12chr6-348477433484784034845554348464973484806534848153-0.329000.000000.00000excludedK562U2AF2
SETAF11ENSG00000064995.12chr6-348477433484784034845554348464973484806534848153-0.181000.000000.00000excludedK562TARDBP
SETAF11ENSG00000064995.12chr6-348480653484815334845749348464973485070834850857-0.122000.000150.00622excludedK562RBM15
SETAF11ENSG00000064995.12chr6-348480653484815334845749348464973485070834850857-0.111000.000350.01204excludedK562AGGF1
SETAF11ENSG00000064995.12chr6-3484740234847513348455543484649734847743348478310.073000.000000.00033includedK562HNRNPK
SETAF11ENSG00000064995.12chr6-348477433484784034845554348464973484806534848128-0.127000.000110.00296excludedK562HNRNPC
A3SSTAF11ENSG00000064995.12chr6-3484774334847883348477433484784034848065348481530.258000.000000.00004longerK562U2AF2
A3SSTAF11ENSG00000064995.12chr6-3484774334847883348477433484784034848065348481280.133000.001600.07500longerK562SF3B4
A3SSTAF11ENSG00000064995.12chr6-3484774334847932348477433484784034848065348481250.157000.000000.00000longerK562AQR
A3SSTAF11ENSG00000064995.12chr6-3484806534848173348480653484815334850708348508570.068000.000090.00077longerK562AQR
A3SSTAF11ENSG00000064995.12chr6-3485070834850931348507083485085734855563348558190.065000.000010.00010longerK562AQR
A3SSTAF11ENSG00000064995.12chr6-3484774334847883348477433484784034848065348481250.259000.000000.00000longerK562PUS1
A3SSTAF11ENSG00000064995.12chr6-3484774334847883348477433484784034848065348481250.125000.001290.04960longerHepG2U2AF1
A3SSTAF11ENSG00000064995.12chr6-3484774334847883348477433484784034848065348481250.178000.000300.01679longerK562U2AF1
MXETAF11ENSG00000064995.12chr6-3484806534848153348507083485085734845749348464973485556334855819-0.056000.007220.048662includedK562AQR
MXETAF11ENSG00000064995.12chr6-3484806534848153348507083485085734845749348464973485556334855819-0.092000.000040.002992includedHepG2SF3A3
MXETAF11ENSG00000064995.12chr6-3484806534848153348507083485085734845749348464973485556334855819-0.226000.000000.000002includedK562PRPF8
MXETAF11ENSG00000064995.12chr6-3484806534848153348507083485085734845749348464973485556334855819-0.065000.000320.018172includedK562AKAP8L

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TAF11 is not avaliable on ENCORE database.