SPA17

General Information

Gene Name       : SPA17
Gene ID             : ENSG00000064199.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SPA17)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SPA17ENSG00000064199.611.248.519.88ENCSR000AEF
HepG2SPA17ENSG00000064199.68.7014.2211.46ENCSR985KAT
K562SPA17ENSG00000064199.613.8413.1413.49ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SPA17 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on SPA17 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SPA17 is not avaliable on ENCORE database.






NO known proteins are bound to SPA17 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SPA17 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SPA17 is not available on ENCORE database.

  • 83 RBPs can affect the levels of SPA17.  








The Knockdown/knockout RNA-Seq assay for SPA17 is not available on ENCORE database.





83 RBPs can affect the gene expression of SPA17 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SPA17ENSG00000064199.2157.51550108.876100.532702.093301.54980HepG2ACO1
SPA17ENSG00000064199.2380.38780104.278201.8669017.4695016.25070HepG2AKAP1
SPA17ENSG00000064199.293.00860176.00400-0.920205.073404.19000HepG2AUH
SPA17ENSG00000064199.235.4804091.08500-1.360204.470803.35110HepG2BCLAF1
SPA17ENSG00000064199.273.10450266.97120-1.868707.001606.09890HepG2BOP1
SPA17ENSG00000064199.242.96720108.84760-1.341006.197105.27380HepG2CKAP4
SPA17ENSG00000064199.298.48180245.10940-1.315503.434402.67600HepG2CPSF6
SPA17ENSG00000064199.288.02800157.48550-0.839202.851601.72960HepG2CPSF7
SPA17ENSG00000064199.298.09690155.57590-0.665302.700501.69630HepG2YBX3
SPA17ENSG00000064199.2154.04390214.59600-0.478301.938701.38220HepG2CELF1
SPA17ENSG00000064199.292.84010230.70040-1.3132011.071909.74490HepG2DAZAP1
SPA17ENSG00000064199.290.77320278.33470-1.616505.243903.90990HepG2DDX59
SPA17ENSG00000064199.2100.21050173.62740-0.793003.519302.38510HepG2DDX5
SPA17ENSG00000064199.240.9050085.78670-1.068502.689402.08070HepG2DDX6
SPA17ENSG00000064199.275.99650147.33350-0.955104.211803.01370HepG2DHX30
SPA17ENSG00000064199.257.40990104.16370-0.859502.806502.12470HepG2DKC1
SPA17ENSG00000064199.299.29690152.75250-0.621402.418601.75580HepG2DNAJC21
SPA17ENSG00000064199.25.3466082.50230-3.9477014.7542013.45560HepG2EIF2S1
SPA17ENSG00000064199.236.4404091.19090-1.323404.318803.52410HepG2EIF4A3
SPA17ENSG00000064199.2116.30050227.63710-0.968906.097204.94240HepG2EIF4G1
SPA17ENSG00000064199.269.87380218.05520-1.6419011.8766010.26380HepG2EIF4G2
SPA17ENSG00000064199.291.77910202.09860-1.138806.512005.65430HepG2ETF1
SPA17ENSG00000064199.2162.4142091.958900.820503.241502.49440HepG2FXR1
SPA17ENSG00000064199.2128.20910277.89240-1.116003.622802.89870HepG2GPKOW
SPA17ENSG00000064199.2234.53210128.842200.864103.446101.87990HepG2HLTF
SPA17ENSG00000064199.267.51710154.21610-1.191605.466804.60230HepG2HNRNPA1
SPA17ENSG00000064199.2143.71530212.04100-0.561102.394201.51660HepG2HNRNPA2B1
SPA17ENSG00000064199.2138.41030219.10360-0.662703.391302.60310HepG2HNRNPF
SPA17ENSG00000064199.230.7280086.34530-1.490604.522403.64880HepG2HNRNPK
SPA17ENSG00000064199.2118.04330210.13740-0.832004.940904.06030HepG2HNRNPL
SPA17ENSG00000064199.261.41650265.19410-2.110407.965906.95920HepG2HNRNPLL
SPA17ENSG00000064199.285.09040170.40780-1.001905.660304.81770HepG2HNRNPU
SPA17ENSG00000064199.278.80420215.75700-1.4531010.876609.53440HepG2IGF2BP1
SPA17ENSG00000064199.2146.8662092.513600.666702.010001.46760HepG2MATR3
SPA17ENSG00000064199.2163.84930270.37200-0.722602.148901.30440HepG2MTPAP
SPA17ENSG00000064199.2152.69350228.76430-0.583202.747001.98600HepG2NOL12
SPA17ENSG00000064199.2135.91370235.11490-0.790702.224901.55150HepG2NSUN2
SPA17ENSG00000064199.222.3031053.66580-1.266802.562301.71540HepG2PABPC1
SPA17ENSG00000064199.255.35080127.36080-1.202204.834303.49000HepG2PCBP2
SPA17ENSG00000064199.284.77060151.98920-0.842303.940903.07670HepG2PPIL4
SPA17ENSG00000064199.233.7067079.50010-1.237903.306602.43100HepG2PRPF8
SPA17ENSG00000064199.2139.31900218.38750-0.648502.837002.23350HepG2PUF60
SPA17ENSG00000064199.2159.77900231.84190-0.537102.646802.06400HepG2PUM1
SPA17ENSG00000064199.2159.43200231.66390-0.539102.274401.66420HepG2PUM2
SPA17ENSG00000064199.253.85790110.89670-1.042004.350003.61000HepG2PUS1
SPA17ENSG00000064199.2258.80630168.912300.615503.095502.55580HepG2RBM22
SPA17ENSG00000064199.225.7276085.15420-1.726806.196405.22420HepG2RBM25
SPA17ENSG00000064199.2261.0352096.415201.4368012.0001011.02470HepG2NELFE
SPA17ENSG00000064199.2117.65780235.99080-1.004105.969405.02260HepG2RPLP0
SPA17ENSG00000064199.264.06550120.71160-0.913902.914401.94780HepG2RPS10
SPA17ENSG00000064199.2161.2361098.655100.708602.786602.16970HepG2RPS19
SPA17ENSG00000064199.232.7531078.64090-1.263603.254902.41160HepG2RRP9
SPA17ENSG00000064199.248.87340109.08770-1.158404.018803.20020HepG2SF3A3
SPA17ENSG00000064199.296.94190262.51390-1.437204.351303.48380HepG2SF3B1
SPA17ENSG00000064199.299.81110209.42820-1.069205.671804.72780HepG2SLBP
SPA17ENSG00000064199.289.11090292.08410-1.712706.305105.11470HepG2SNRNP70
SPA17ENSG00000064199.2241.6558094.146601.3599010.565709.77350HepG2SRSF1
SPA17ENSG00000064199.276.00220215.25340-1.5019012.2310010.94650HepG2SRSF7
SPA17ENSG00000064199.253.59560165.62080-1.6277011.4757010.57080HepG2SSB
SPA17ENSG00000064199.272.25400128.97450-0.835902.756701.52150HepG2STAU1
SPA17ENSG00000064199.2179.01990245.23070-0.454002.014501.46780HepG2SUCLG1
SPA17ENSG00000064199.279.21680130.38830-0.718902.466301.57550HepG2SUPT6H
SPA17ENSG00000064199.2140.4047084.619900.730402.727202.17030HepG2TAF15
SPA17ENSG00000064199.259.01700258.37120-2.130208.337607.17020HepG2TARDBP
SPA17ENSG00000064199.2107.08560165.56250-0.628602.450601.97490HepG2TIAL1
SPA17ENSG00000064199.2120.77110167.06460-0.468101.785601.31260HepG2TRIM56
SPA17ENSG00000064199.2136.32790213.37810-0.646302.332401.53680HepG2TUFM
SPA17ENSG00000064199.251.83360165.19290-1.672209.315708.15340HepG2U2AF1
SPA17ENSG00000064199.2111.89920225.87240-1.013304.460303.38000HepG2UBE2L3
SPA17ENSG00000064199.230.0342060.60860-1.012902.320301.62390HepG2UCHL5
SPA17ENSG00000064199.2235.66590311.69980-0.403402.005101.50710K562AGGF1
SPA17ENSG00000064199.2520.47660343.054500.601303.718302.25420K562APOBEC3C
SPA17ENSG00000064199.2137.68570289.80300-1.073706.413805.58170K562AQR
SPA17ENSG00000064199.2232.96850346.71760-0.573604.188103.40830K562DDX47
SPA17ENSG00000064199.268.72160129.94770-0.919103.403902.38700K562EFTUD2
SPA17ENSG00000064199.269.55520139.12240-1.000103.945102.68200K562EIF3D
SPA17ENSG00000064199.2103.91770181.83950-0.807203.980303.03400K562EIF3G
SPA17ENSG00000064199.2286.44490388.76520-0.440602.241801.39320K562EIF4G2
SPA17ENSG00000064199.2157.37040273.26920-0.796202.236501.52170K562GPKOW
SPA17ENSG00000064199.270.95780185.32920-1.385108.010805.83420K562HNRNPK
SPA17ENSG00000064199.285.63350191.99370-1.164807.763206.27320K562HNRNPU
SPA17ENSG00000064199.2455.85750341.166000.418002.190701.48110K562HSPD1
SPA17ENSG00000064199.2278.96700194.604300.519502.765301.84250K562MATR3
SPA17ENSG00000064199.2182.73910270.27630-0.564602.104401.35770K562NAA15
SPA17ENSG00000064199.269.84630173.50710-1.312707.351505.72850K562PCBP2
SPA17ENSG00000064199.2527.66610296.793400.830106.538405.25600K562PCBP3
SPA17ENSG00000064199.2383.37090227.651400.751806.166504.97590K562POLR2G
SPA17ENSG00000064199.2212.66930321.66490-0.596903.284902.70100K562PUS1
SPA17ENSG00000064199.2226.96350313.40360-0.465602.433301.87080K562RBM15
SPA17ENSG00000064199.2102.28370162.50460-0.667902.596601.31790K562RBM25
SPA17ENSG00000064199.2330.02570191.198500.787405.408903.81100K562NELFE
SPA17ENSG00000064199.290.03770178.13830-0.984405.514204.28020K562SF3B4
SPA17ENSG00000064199.2292.17970185.690300.653903.830403.00580K562SRSF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SPA17 is not available on ENCORE database.





2 RBPs can affect the splicing of SPA17 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESPA17ENSG00000064199.2chr11+124561591124561678124551284124551355124564198124567414-0.158000.003570.04046excludedHepG2U2AF2
A3SSSPA17ENSG00000064199.2chr11+1245641681245643381245641981245643381245615911245616780.101000.000330.00260longerK562AQR
A3SSSPA17ENSG00000064199.2chr11+1245450961245453141245451331245453141245436931245438480.080000.011390.05903longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SPA17 is not avaliable on ENCORE database.