SLC39A8

General Information

Gene Name       : SLC39A8
Gene ID             : ENSG00000138821.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC39A8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC39A8ENSG00000138821.1222.3618.1020.23ENCSR000AEF
HepG2SLC39A8ENSG00000138821.120.200.300.25ENCSR985KAT
K562SLC39A8ENSG00000138821.1212.5114.1613.34ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC39A8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC39A8 RNA is bound by 5 proteins.  







eCLIP assay for SLC39A8 is not avaliable on ENCORE database.





5 proteins are bound to SLC39A8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4103265932103265966-5'-UTR,intron-Distal4.760084.48994K562RBM15
chr4103265966103265980-5'-UTR,intron-Distal4.483863.15006K562RBM15
chr4103225520103225641-CDS,intron-Distal,intron-Proximal4.679943.74511K562IGF2BP1
chr4103236881103236974-CDS,intron-Distal3.646853.34065K562IGF2BP1
chr4103225484103225651-CDS,intron-Distal,intron-Proximal3.313683.49838K562SND1
chr4103227257103227414-intron-Distal4.114713.42844K562KHSRP
chr4103264209103264319-intron-Distal3.667993.24603K562KHSRP
chr4103192089103192217-intron-Distal4.644334.40618K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC39A8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC39A8 is not available on ENCORE database.

  • 75 RBPs can affect the levels of SLC39A8.  








The Knockdown/knockout RNA-Seq assay for SLC39A8 is not available on ENCORE database.





75 RBPs can affect the gene expression of SLC39A8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC39A8ENSG00000138821.826.898807.441101.853902.294001.47770HepG2BCLAF1
SLC39A8ENSG00000138821.8112.363305.236704.4233019.5746017.59420HepG2CNOT7
SLC39A8ENSG00000138821.867.0125020.083701.738305.601004.74790HepG2CELF1
SLC39A8ENSG00000138821.850.3620021.595901.221502.669101.93830HepG2DAZAP1
SLC39A8ENSG00000138821.857.0654025.255401.175902.282101.70900HepG2DDX3X
SLC39A8ENSG00000138821.836.7488011.123301.724002.774601.75590HepG2GNB2L1
SLC39A8ENSG00000138821.835.0424012.463901.491202.522301.70920HepG2PARN
SLC39A8ENSG00000138821.858.5163016.250801.848202.920102.36090HepG2PTBP1
SLC39A8ENSG00000138821.896.1761021.683702.149009.424508.22440HepG2PUM2
SLC39A8ENSG00000138821.889.0535017.743102.3273010.535409.46600HepG2PUS1
SLC39A8ENSG00000138821.82.8094016.22860-2.530202.443901.79500HepG2RPLP0
SLC39A8ENSG00000138821.832.2341011.361701.504302.198501.56450HepG2SF3B1
SLC39A8ENSG00000138821.849.2916012.348201.996905.281804.55390HepG2TRIM56
SLC39A8ENSG00000138821.8454.29890638.97730-0.492103.555902.19920K562AARS
SLC39A8ENSG00000138821.8960.428901483.08950-0.626907.827406.67560K562AKAP8L
SLC39A8ENSG00000138821.82083.734001516.610800.458204.438903.72830K562AQR
SLC39A8ENSG00000138821.81067.464701556.11130-0.543808.403206.68060K562ATP5C1
SLC39A8ENSG00000138821.81165.06970910.159100.356103.755102.17590K562BCCIP
SLC39A8ENSG00000138821.81316.718101703.32710-0.371404.001202.54580K562CCDC124
SLC39A8ENSG00000138821.82166.961501010.133201.1010010.344608.27920K562CNOT7
SLC39A8ENSG00000138821.81059.24010814.897400.378203.253902.40150K562CPSF6
SLC39A8ENSG00000138821.84484.251202104.889101.0910038.3200035.46030K562CELF1
SLC39A8ENSG00000138821.8868.467401672.27090-0.9453015.7638012.61800K562DDX19B
SLC39A8ENSG00000138821.82351.802001253.816300.9073030.1862028.26070K562DDX47
SLC39A8ENSG00000138821.8610.22170773.03570-0.341202.763301.45980K562DDX6
SLC39A8ENSG00000138821.81216.488101595.93220-0.391705.059803.82300K562DKC1
SLC39A8ENSG00000138821.8972.46630754.225800.366602.558501.68380K562EFTUD2
SLC39A8ENSG00000138821.8588.26530330.351700.832404.806403.44080K562EIF3A
SLC39A8ENSG00000138821.8952.72580782.978500.283002.346401.61000K562EIF3G
SLC39A8ENSG00000138821.8297.91940717.39290-1.2678024.6622021.48690K562EIF4B
SLC39A8ENSG00000138821.8493.71380695.35590-0.494104.325202.65830K562EWSR1
SLC39A8ENSG00000138821.8744.30940941.57170-0.339202.708801.45870K562EXOSC5
SLC39A8ENSG00000138821.81201.45840828.425300.536207.896606.94280K562FXR1
SLC39A8ENSG00000138821.81101.35780806.776500.448902.661101.97090K562G3BP2
SLC39A8ENSG00000138821.81123.04410751.481200.579508.133806.26240K562GLRX3
SLC39A8ENSG00000138821.82660.644901691.155900.653706.769505.57940K562GRSF1
SLC39A8ENSG00000138821.81566.27060885.550800.8226011.375809.41180K562HNRNPA1
SLC39A8ENSG00000138821.8853.20040699.334900.286801.865501.36450K562HNRNPC
SLC39A8ENSG00000138821.8873.388801133.07060-0.375503.237302.08430K562HNRNPL
SLC39A8ENSG00000138821.81344.69810980.557400.455502.858601.95080K562HNRNPU
SLC39A8ENSG00000138821.8627.62390952.32320-0.601602.711901.53450K562IGF2BP3
SLC39A8ENSG00000138821.8461.37200327.946800.492402.866901.35690K562KHDRBS1
SLC39A8ENSG00000138821.8946.18580664.342600.510103.114602.11730K562KRR1
SLC39A8ENSG00000138821.8921.55390676.998800.444803.650502.00340K562LARP7
SLC39A8ENSG00000138821.81465.04310982.573600.576204.663103.43430K562MATR3
SLC39A8ENSG00000138821.82595.202201825.088100.507806.248104.56790K562MSI2
SLC39A8ENSG00000138821.81378.56050790.078700.8030016.2853014.54160K562MTPAP
SLC39A8ENSG00000138821.82445.940101872.705800.385203.586101.86750K562NOL12
SLC39A8ENSG00000138821.81107.55030877.880700.335204.248603.34570K562NSUN2
SLC39A8ENSG00000138821.8494.26040688.45010-0.478102.846401.39910K562NUSAP1
SLC39A8ENSG00000138821.84408.092201197.674401.8798056.2818053.06900K562PCBP3
SLC39A8ENSG00000138821.83483.83020918.646401.9230036.0359033.52340K562POLR2G
SLC39A8ENSG00000138821.81683.48050733.948401.1976022.5957020.44140K562PRPF8
SLC39A8ENSG00000138821.81335.51390956.397100.481603.048802.35530K562PTBP1
SLC39A8ENSG00000138821.83102.220001868.180600.7316012.8052011.03700K562PUF60
SLC39A8ENSG00000138821.8313.58170571.96470-0.867109.393307.54950K562RCC2
SLC39A8ENSG00000138821.81072.62370747.612000.520703.757502.80280K562RPS19
SLC39A8ENSG00000138821.81403.97550900.652100.640404.024402.09470K562RPS3A
SLC39A8ENSG00000138821.81629.08830750.434901.1182013.5814010.83230K562RRP9
SLC39A8ENSG00000138821.81191.48430818.569600.541505.973104.38080K562SAFB
SLC39A8ENSG00000138821.81403.73170846.291100.729907.061204.76140K562SDAD1
SLC39A8ENSG00000138821.8988.37460628.053300.654103.263801.55900K562SERBP1
SLC39A8ENSG00000138821.8560.89170357.741700.648705.212803.44450K562SLBP
SLC39A8ENSG00000138821.81684.89410887.432400.9248022.5131020.26070K562SRPK2
SLC39A8ENSG00000138821.81585.298001045.629100.600309.068206.38060K562SRSF9
SLC39A8ENSG00000138821.81064.11680807.671100.397704.528102.83740K562SSB
SLC39A8ENSG00000138821.82362.814701630.031300.535509.542407.01180K562SUCLG1
SLC39A8ENSG00000138821.81327.18210921.441000.526306.698405.41110K562SYNCRIP
SLC39A8ENSG00000138821.8797.27730603.087500.402602.541101.64740K562TIAL1
SLC39A8ENSG00000138821.8418.30040640.59340-0.614904.847603.51180K562TRIM56
SLC39A8ENSG00000138821.81459.07980870.730100.744708.241405.31120K562TRNAU1AP
SLC39A8ENSG00000138821.81019.47220807.605700.336002.864602.04720K562U2AF2
SLC39A8ENSG00000138821.81663.880402106.03630-0.340002.897301.45970K562UBE2L3
SLC39A8ENSG00000138821.81371.18080752.107400.8663011.747009.59420K562UCHL5
SLC39A8ENSG00000138821.81323.17430796.488500.732203.875202.83300K562WDR3
SLC39A8ENSG00000138821.82058.72420828.227001.3136062.4807059.76960K562WDR43
SLC39A8ENSG00000138821.82481.428601796.602800.465805.705303.84920K562WRN
SLC39A8ENSG00000138821.82244.666401708.660800.393503.890902.83620K562ZC3H8
SLC39A8ENSG00000138821.81324.91010979.730400.435304.408002.11130K562ZNF800
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC39A8 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SLC39A8 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SLC39A8 is not avaliable on ENCORE database.