SLC36A1

General Information

Gene Name       : SLC36A1
Gene ID             : ENSG00000123643.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC36A1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC36A1ENSG00000123643.123.243.003.12ENCSR000AEF
HepG2SLC36A1ENSG00000123643.124.474.864.67ENCSR985KAT
K562SLC36A1ENSG00000123643.125.224.574.89ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC36A1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC36A1 RNA is bound by 6 proteins.  







eCLIP assay for SLC36A1 is not avaliable on ENCORE database.





6 proteins are bound to SLC36A1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5150869353150869443+3'-UTR3.239895.09741K562UPF1
chr5150868379150868504+3'-UTR3.311626.37005K562UPF1
chr5150827226150827276+5'-UTR,intron-Distal3.301433.16711HepG2DDX3X
chr5150827329150827435+5'-UTR,intron-Distal,intron-Proximal4.704035.35117HepG2PRPF8
chr5150827289150827337+5'-UTR,intron-Distal4.801434.03170HepG2DDX3X
chr5150847475150847564+CDS,intron-Proximal4.442174.22101K562PRPF8
chr5150847450150847531+CDS,intron-Proximal4.767145.93840HepG2PRPF8
chr5150847476150847566+CDS,intron-Proximal3.895794.00320K562AQR
chr5150853206150853277+CDS,intron-Proximal5.082403.62536K562AQR
chr5150838383150838492+CDS3.568364.49887K562ZNF622
chr5150856154150856283+CDS4.297644.16554HepG2PPIG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC36A1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC36A1 is not available on ENCORE database.

  • 84 RBPs can affect the levels of SLC36A1.  








The Knockdown/knockout RNA-Seq assay for SLC36A1 is not available on ENCORE database.





84 RBPs can affect the gene expression of SLC36A1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC36A1ENSG00000123643.8278.52470487.92030-0.808806.242405.08480HepG2ASCC1
SLC36A1ENSG00000123643.8724.23500463.559700.643605.236304.18980HepG2CIRBP
SLC36A1ENSG00000123643.8514.51060260.499500.981806.331305.17490HepG2CNOT7
SLC36A1ENSG00000123643.8265.33610357.40600-0.429702.611401.62400HepG2YBX3
SLC36A1ENSG00000123643.8643.62900496.702400.373703.327602.52780HepG2DAZAP1
SLC36A1ENSG00000123643.8732.39230564.874400.374602.088201.53630HepG2DDX3X
SLC36A1ENSG00000123643.8662.47740509.351600.379102.314201.39050HepG2DDX5
SLC36A1ENSG00000123643.8165.86480485.26720-1.5488016.4095015.06960HepG2DDX6
SLC36A1ENSG00000123643.8466.21600350.961800.409602.851502.14070HepG2DNAJC21
SLC36A1ENSG00000123643.8755.13900466.471000.694905.859705.01370HepG2EIF2S1
SLC36A1ENSG00000123643.8320.23060469.39750-0.551703.602702.68090HepG2EIF4G2
SLC36A1ENSG00000123643.8804.96530583.314500.464602.212101.51990HepG2FIP1L1
SLC36A1ENSG00000123643.8202.64280341.41010-0.752605.338704.25680HepG2FUBP3
SLC36A1ENSG00000123643.8283.59980482.49430-0.766705.587604.65540HepG2G3BP1
SLC36A1ENSG00000123643.8381.82840512.25790-0.423902.294301.48630HepG2G3BP2
SLC36A1ENSG00000123643.8353.96210241.110100.553802.892701.97360HepG2GEMIN5
SLC36A1ENSG00000123643.8277.83020481.92650-0.794605.583404.69530HepG2GPKOW
SLC36A1ENSG00000123643.8322.05620419.41950-0.381102.651401.69190HepG2HDGF
SLC36A1ENSG00000123643.8330.58000488.61980-0.563703.578402.79030HepG2HNRNPK
SLC36A1ENSG00000123643.8349.61520452.46570-0.372002.683202.01880HepG2HNRNPL
SLC36A1ENSG00000123643.8509.63350391.507000.380302.880302.26240HepG2HNRNPU
SLC36A1ENSG00000123643.8262.77150460.28520-0.808702.273401.38860HepG2IGF2BP3
SLC36A1ENSG00000123643.8300.79840493.31050-0.713704.321603.04140HepG2KHSRP
SLC36A1ENSG00000123643.8330.61620544.70940-0.720304.473002.87600HepG2KRR1
SLC36A1ENSG00000123643.8754.93860523.238000.528803.364102.67470HepG2MATR3
SLC36A1ENSG00000123643.8656.12240471.998000.475103.359902.47140HepG2MSI2
SLC36A1ENSG00000123643.8297.56640387.53450-0.381102.316701.53460HepG2PARN
SLC36A1ENSG00000123643.8269.26280397.19640-0.560802.569401.56720HepG2PCBP2
SLC36A1ENSG00000123643.8386.96720536.62390-0.471703.501602.81040HepG2QKI
SLC36A1ENSG00000123643.8979.59560520.316700.9127016.5052015.45500HepG2RBM22
SLC36A1ENSG00000123643.8399.52160630.52120-0.658303.303502.56500HepG2SF3A3
SLC36A1ENSG00000123643.8389.16490515.86410-0.406602.954102.34710HepG2SF3B4
SLC36A1ENSG00000123643.8211.08000374.05590-0.825503.052701.36970HepG2SLTM
SLC36A1ENSG00000123643.8346.69260506.52300-0.547002.381601.65870HepG2SNRNP70
SLC36A1ENSG00000123643.8713.17540587.670100.279202.017301.56890HepG2SRFBP1
SLC36A1ENSG00000123643.8261.84390538.44750-1.0401013.9400013.05310HepG2SRSF1
SLC36A1ENSG00000123643.8274.59600438.05320-0.673806.731005.93810HepG2SRSF9
SLC36A1ENSG00000123643.8372.74020510.22200-0.453003.812003.23150HepG2SSB
SLC36A1ENSG00000123643.8277.14660483.96940-0.804308.615507.71540HepG2TAF15
SLC36A1ENSG00000123643.8309.00540444.71060-0.525203.738502.77370HepG2TIA1
SLC36A1ENSG00000123643.8139.68980383.82110-1.4582020.9873019.61820HepG2TRIM56
SLC36A1ENSG00000123643.8708.05700243.670501.538806.027004.51610HepG2U2AF2
SLC36A1ENSG00000123643.8687.50480539.863000.348702.918502.30700HepG2UTP3
SLC36A1ENSG00000123643.81174.12760614.986800.9329026.3672025.11570HepG2ZNF622
SLC36A1ENSG00000123643.8247.81670383.02420-0.628203.277401.85480HepG2ZRANB2
SLC36A1ENSG00000123643.81254.93830749.462500.743608.719407.77370K562AQR
SLC36A1ENSG00000123643.8469.14830638.49580-0.444603.641502.58150K562ATP5C1
SLC36A1ENSG00000123643.8853.51280578.463100.561104.558803.42780K562BOP1
SLC36A1ENSG00000123643.81451.11060655.364801.1467010.228508.17270K562CNOT7
SLC36A1ENSG00000123643.8886.89960615.031200.528005.175604.10960K562CPSF6
SLC36A1ENSG00000123643.81743.393401161.927000.585309.368907.62220K562CELF1
SLC36A1ENSG00000123643.8581.21760405.816200.518203.546402.01330K562DHX30
SLC36A1ENSG00000123643.8444.43220654.79730-0.559105.671404.36340K562DKC1
SLC36A1ENSG00000123643.8499.55000674.74140-0.433703.784302.96520K562EIF2S2
SLC36A1ENSG00000123643.81115.67870625.859300.8339010.678608.94350K562FMR1
SLC36A1ENSG00000123643.8862.60020530.506800.701206.617405.14390K562FTO
SLC36A1ENSG00000123643.8774.65400587.170500.399702.789801.99210K562GPKOW
SLC36A1ENSG00000123643.8778.89210533.527500.545805.409903.92800K562HNRNPA1
SLC36A1ENSG00000123643.8792.92360410.244000.9506012.6907011.48850K562HNRNPC
SLC36A1ENSG00000123643.8524.72740366.384400.518103.644002.31620K562HNRNPF
SLC36A1ENSG00000123643.8344.27360564.17590-0.712605.189403.86730K562HNRNPM
SLC36A1ENSG00000123643.8848.75420590.803500.522605.720904.42440K562HNRNPU
SLC36A1ENSG00000123643.8553.00680929.87420-0.749708.459307.08340K562HSPD1
SLC36A1ENSG00000123643.8299.38920441.89230-0.561704.036502.53630K562IGF2BP3
SLC36A1ENSG00000123643.8903.80190598.542500.594502.863901.41940K562ILF2
SLC36A1ENSG00000123643.8964.04010501.456600.942908.801907.02260K562KRR1
SLC36A1ENSG00000123643.8527.81600723.44570-0.454803.625502.56260K562MBNL1
SLC36A1ENSG00000123643.8792.41580573.157800.467203.756602.72490K562METAP2
SLC36A1ENSG00000123643.81473.244101007.478200.548106.207104.53100K562MSI2
SLC36A1ENSG00000123643.8963.27700668.328400.527307.172605.92280K562MTPAP
SLC36A1ENSG00000123643.81356.104301033.761200.391503.482001.78790K562NOL12
SLC36A1ENSG00000123643.81110.52980742.633300.580408.238807.04900K562NSUN2
SLC36A1ENSG00000123643.81321.68570629.616401.069709.787707.47470K562PABPC1
SLC36A1ENSG00000123643.81705.17380994.887100.777209.393707.87020K562PCBP3
SLC36A1ENSG00000123643.81122.03730763.128600.556006.582905.35770K562POLR2G
SLC36A1ENSG00000123643.8349.94690495.44310-0.501603.079902.28780K562PRPF8
SLC36A1ENSG00000123643.8340.40570443.61090-0.382002.318501.70330K562PTBP1
SLC36A1ENSG00000123643.81323.261101031.265700.359602.992802.14260K562PUF60
SLC36A1ENSG00000123643.81358.650501074.765600.338104.039502.87530K562PUM2
SLC36A1ENSG00000123643.8459.11580335.651600.451802.929701.90810K562RCC2
SLC36A1ENSG00000123643.8335.21260504.57420-0.590003.673402.72940K562RPS19
SLC36A1ENSG00000123643.8904.07590597.016400.598603.180101.52940K562SBDS
SLC36A1ENSG00000123643.8845.27480558.539900.597704.534903.27360K562SF3B1
SLC36A1ENSG00000123643.8541.58220399.240000.439802.781201.51320K562SLBP
SLC36A1ENSG00000123643.8944.35940750.658600.331103.384702.36150K562SRPK2
SLC36A1ENSG00000123643.8314.25840434.88490-0.468702.868802.15150K562SRSF1
SLC36A1ENSG00000123643.8599.70110765.41540-0.352002.620101.82380K562SYNCRIP
SLC36A1ENSG00000123643.8905.58900353.791501.3559020.8041018.07130K562TIAL1
SLC36A1ENSG00000123643.8508.56590340.416900.579004.973903.89860K562U2AF2
SLC36A1ENSG00000123643.8679.99930507.609000.421702.488401.52790K562UCHL5
SLC36A1ENSG00000123643.8891.92610673.782500.404502.435201.61170K562WDR3
SLC36A1ENSG00000123643.81381.78720844.275800.710609.817508.07760K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC36A1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SLC36A1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SLC36A1 is not avaliable on ENCORE database.