SENP2

General Information

Gene Name       : SENP2
Gene ID             : ENSG00000163904.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SENP2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SENP2ENSG00000163904.1226.9924.4725.73ENCSR000AEF
HepG2SENP2ENSG00000163904.1213.9825.1519.56ENCSR985KAT
K562SENP2ENSG00000163904.1226.8433.6530.24ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SENP2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SENP2 RNA is bound by 12 proteins.  







eCLIP assay for SENP2 is not avaliable on ENCORE database.





12 proteins are bound to SENP2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3185349651185349705+3'-UTR4.498545.81141K562CSTF2T
chr3185349560185349651+3'-UTR4.743316.32269K562CSTF2T
chr3185324206185324286+3'-UTR,5'-UTR,CDS4.568606.32937K562LIN28B
chr3185349596185349679+3'-UTR3.303564.07710K562ILF3
chr3185349415185349488+3'-UTR5.3718911.15321K562ILF3
chr3185324110185324173+3'-UTR,5'-UTR,CDS,intron-Proximal3.164683.39477K562BUD13
chr3185327070185327141+3'-UTR,CDS,intron-Proximal3.278323.12941K562UCHL5
chr3185350920185351063+3'-UTR4.564545.00655K562ILF3
chr3185332443185332525+3'-UTR,CDS5.003985.23259HepG2BCLAF1
chr3185318600185318664+3'-UTR,5'-UTR,CDS,intron-Proximal5.095926.81564HepG2PRPF8
chr3185349081185349187+3'-UTR5.175749.53650K562ILF3
chr3185329412185329480+3'-UTR,CDS,intron-Proximal3.992114.98250K562AQR
chr3185349104185349195+3'-UTR5.661436.17200HepG2PCBP2
chr3185347904185347978+3'-UTR5.005259.05435K562LIN28B
chr3185350840185350908+3'-UTR3.830323.14687K562CSTF2T
chr3185329436185329534+3'-UTR,CDS,intron-Proximal3.583553.57857HepG2BCLAF1
chr3185347743185347831+3'-UTR3.838054.09469HepG2XPO5
chr3185350946185351056+3'-UTR4.922548.39137K562CSTF2T
chr3185349413185349489+3'-UTR3.888066.86777K562CSTF2T
chr3185332448185332530+3'-UTR,CDS,intron-Proximal3.494803.12941K562UCHL5
chr3185332354185332384+3'-UTR,CDS4.005873.86978K562YBX3
chr3185349083185349187+3'-UTR4.5892512.42749K562CSTF2T
chr3185304119185304206+5'-UTR,CDS,intron-Distal4.634718.90399HepG2DDX3X
chr3185304109185304301+5'-UTR,CDS,intron-Distal3.861204.46401K562DDX3X
chr3185304302185304352+intron-Distal,intron-Proximal4.699634.65563K562AQR
chr3185327577185327621+intron-Distal3.946443.01043HepG2PCBP2
chr3185327463185327577+intron-Distal5.000907.34252HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SENP2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SENP2 is not available on ENCORE database.

  • 66 RBPs can affect the levels of SENP2.  








The Knockdown/knockout RNA-Seq assay for SENP2 is not available on ENCORE database.





66 RBPs can affect the gene expression of SENP2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SENP2ENSG00000163904.8867.01930671.501500.368602.513701.48760HepG2AATF
SENP2ENSG00000163904.81080.17860827.365700.384604.935304.16820HepG2ACO1
SENP2ENSG00000163904.8301.94200831.30890-1.4611037.4652035.18230HepG2AKAP8L
SENP2ENSG00000163904.81506.939401274.597000.241502.575701.91010HepG2AUH
SENP2ENSG00000163904.8893.636101367.89210-0.614207.104606.19760HepG2BOP1
SENP2ENSG00000163904.8732.65510981.17870-0.421402.885102.09530HepG2CIRBP
SENP2ENSG00000163904.8353.61170827.25320-1.2262031.2081029.52100HepG2CKAP4
SENP2ENSG00000163904.8787.509301255.80620-0.673207.605206.51130HepG2CPSF6
SENP2ENSG00000163904.81113.49710741.340400.586806.170505.20470HepG2DDX21
SENP2ENSG00000163904.8961.87130725.068500.407603.393402.37550HepG2DDX24
SENP2ENSG00000163904.81032.06420758.253800.444703.113701.75200HepG2DDX27
SENP2ENSG00000163904.81506.597601195.690600.333402.193901.63000HepG2DDX3X
SENP2ENSG00000163904.8706.16870941.19820-0.414502.695901.78400HepG2EEF2
SENP2ENSG00000163904.8460.84880987.40400-1.0993013.1392011.91290HepG2EIF2S1
SENP2ENSG00000163904.81474.621101091.286900.434203.077902.40470HepG2EIF4A3
SENP2ENSG00000163904.81881.732701463.359400.362705.476304.67880HepG2ETF1
SENP2ENSG00000163904.8489.41020680.33930-0.475203.362802.36450HepG2GEMIN5
SENP2ENSG00000163904.8812.711501423.57250-0.808709.061407.94560HepG2GPKOW
SENP2ENSG00000163904.8734.232601110.85160-0.597409.418507.88830HepG2HNRNPA2B1
SENP2ENSG00000163904.8648.68280867.04550-0.418603.076002.34990HepG2HNRNPC
SENP2ENSG00000163904.8678.269401101.08970-0.6990014.8605013.41020HepG2HNRNPL
SENP2ENSG00000163904.8835.041901358.53980-0.702107.849706.85050HepG2HNRNPLL
SENP2ENSG00000163904.8516.75540918.71750-0.830104.224303.07280HepG2HNRNPM
SENP2ENSG00000163904.8927.371601213.09010-0.387502.287301.62680HepG2IGF2BP1
SENP2ENSG00000163904.8415.64820974.07210-1.228705.820704.42010HepG2IGF2BP3
SENP2ENSG00000163904.8551.06350756.35790-0.456905.598704.16240HepG2KIF1C
SENP2ENSG00000163904.81386.787701107.382500.324501.882101.35690HepG2MATR3
SENP2ENSG00000163904.81641.548001204.592000.446404.192503.27660HepG2NSUN2
SENP2ENSG00000163904.81028.89690852.522700.271202.444601.64370HepG2PARN
SENP2ENSG00000163904.8459.73140625.28380-0.443702.185201.46460HepG2PRPF8
SENP2ENSG00000163904.81014.201801213.66810-0.259002.021701.44170HepG2PUM2
SENP2ENSG00000163904.81090.63320842.735500.371904.685003.92390HepG2PUS1
SENP2ENSG00000163904.81442.002501200.299000.264602.154601.38520HepG2RBM15
SENP2ENSG00000163904.81487.796401223.107800.282502.718702.20380HepG2RBM22
SENP2ENSG00000163904.8849.724701043.15230-0.295902.164201.56250HepG2RBM25
SENP2ENSG00000163904.8660.88340953.27010-0.528504.067302.84640HepG2RBM27
SENP2ENSG00000163904.8559.336401231.14610-1.1382013.3092011.76530HepG2SF3A3
SENP2ENSG00000163904.81612.873101153.310900.483808.187107.47350HepG2SRSF1
SENP2ENSG00000163904.81183.49580938.271500.334904.033703.39080HepG2SRSF9
SENP2ENSG00000163904.82004.238501199.477000.7405021.3132020.18260HepG2SSB
SENP2ENSG00000163904.81123.773901284.74890-0.193101.895501.36300HepG2SUCLG1
SENP2ENSG00000163904.81245.51380806.681800.626605.943805.00980HepG2SUPV3L1
SENP2ENSG00000163904.81453.918801036.614000.488006.882606.06760HepG2TAF15
SENP2ENSG00000163904.81109.96520836.840400.407403.117402.59190HepG2TIAL1
SENP2ENSG00000163904.81454.935801138.935600.353202.178101.61410HepG2U2AF1
SENP2ENSG00000163904.8894.653001183.11320-0.403202.632101.81470HepG2UBE2L3
SENP2ENSG00000163904.81396.288101091.838800.354704.790503.91310HepG2UPF1
SENP2ENSG00000163904.8897.779301200.81300-0.419606.726005.97000HepG2ZNF622
SENP2ENSG00000163904.81475.636002307.78910-0.6452016.3279015.07140K562AGGF1
SENP2ENSG00000163904.81249.025602401.33800-0.9430018.9751016.95720K562AKAP8L
SENP2ENSG00000163904.81824.160602271.56790-0.316502.611702.03770K562AQR
SENP2ENSG00000163904.81906.390802743.52750-0.525202.997201.49110K562CKAP4
SENP2ENSG00000163904.82033.283402508.67510-0.303103.682502.39720K562CPEB4
SENP2ENSG00000163904.81110.26660786.778400.496804.455602.71960K562DNAJC21
SENP2ENSG00000163904.81486.877501243.799900.257402.430301.85600K562FXR1
SENP2ENSG00000163904.81814.149101319.369500.459303.048902.30040K562G3BP2
SENP2ENSG00000163904.81318.894801997.04900-0.598508.135006.77060K562GPKOW
SENP2ENSG00000163904.81061.423301582.14710-0.575907.067605.03490K562IGF2BP3
SENP2ENSG00000163904.8726.570501705.18190-1.2308016.5046014.05550K562KRR1
SENP2ENSG00000163904.81258.677901635.01420-0.377403.661102.68650K562MAGOH
SENP2ENSG00000163904.82341.153502854.94670-0.286202.832801.91030K562MBNL1
SENP2ENSG00000163904.81611.052601949.33480-0.275002.214701.43130K562METAP2
SENP2ENSG00000163904.81125.455002523.57670-1.165008.356106.31490K562PABPN1
SENP2ENSG00000163904.81738.179001474.110400.237601.981801.30200K562POLR2G
SENP2ENSG00000163904.81859.367602320.40430-0.319603.851603.16830K562RBM15
SENP2ENSG00000163904.81297.071102308.53530-0.831703.551502.13620K562SF1
SENP2ENSG00000163904.81055.905302123.70070-1.0081030.8074028.44580K562SF3A3
SENP2ENSG00000163904.81134.503801372.41640-0.274702.251601.48220K562SF3B4
SENP2ENSG00000163904.81804.290701478.658100.287002.265801.52210K562SYNCRIP
SENP2ENSG00000163904.81283.280701576.09030-0.296502.045801.43110K562TARDBP
SENP2ENSG00000163904.81254.922401520.28950-0.276702.294401.55600K562TIA1
SENP2ENSG00000163904.81997.080102282.01830-0.192402.074001.44570K562UPF1
SENP2ENSG00000163904.81600.062701952.64800-0.287302.487901.65540K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SENP2 is not available on ENCORE database.





17 RBPs can affect the splicing of SENP2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESENP2ENSG00000163904.8chr3+185316745185316812185316181185316333185318552185318613-0.143000.000810.01759excludedK562SF3B4
SESENP2ENSG00000163904.8chr3+185316745185316812185316181185316333185318552185318613-0.069000.000100.00169excludedK562AQR
A3SSSENP2ENSG00000163904.8chr3+185316745185316812185316779185316812185316199185316333-0.211000.002290.09788shorterK562SF3B4
MXESENP2ENSG00000163904.8chr3+1853323511853325281853352671853353991853311321853311961853370861853372900.123000.003410.056031includedHepG2FTO
MXESENP2ENSG00000163904.8chr3+185332351185332528185335267185335399185331132185331196185337086185337290-0.132000.005840.061082includedK562DROSHA
MXESENP2ENSG00000163904.8chr3+1853323511853325281853352671853353991853311321853311961853370861853372900.163000.000190.029591includedHepG2SUGP2
MXESENP2ENSG00000163904.8chr3+1853079011853079571853185521853186431853039611853043021853241171853242860.235000.000000.000741includedK562LIN28B
MXESENP2ENSG00000163904.8chr3+1853161991853163331853167451853168121853079011853079571853185521853186430.210000.000090.007411includedK562FXR1
MXESENP2ENSG00000163904.8chr3+1853162671853163331853167791853168121853079011853079571853185521853186430.134000.004780.034521includedK562AQR
MXESENP2ENSG00000163904.8chr3+1853162671853163331853167451853168121853079011853079571853185521853186430.101000.003310.025431includedK562AQR
MXESENP2ENSG00000163904.8chr3+1853161991853163331853167451853168121853079011853079571853185521853186430.404000.012450.093281includedHepG2SFPQ
MXESENP2ENSG00000163904.8chr3+1853323511853325281853352671853353991853311321853311961853370861853372900.064000.008680.072071includedHepG2SFPQ
MXESENP2ENSG00000163904.8chr3+185307901185307957185318552185318643185303961185304302185324117185324286-0.149000.000060.022562includedK562SMNDC1
MXESENP2ENSG00000163904.8chr3+1853079011853079571853161991853163331853039611853043021853167451853168120.126000.001940.042621includedHepG2DDX55
MXESENP2ENSG00000163904.8chr3+1853161991853163331853167451853168121853079011853079571853185521853186430.342000.017530.084061includedHepG2U2AF2
MXESENP2ENSG00000163904.8chr3+1853352671853353991853370861853372901853323511853325281853396131853396930.169000.003550.094171includedHepG2SF3B4
MXESENP2ENSG00000163904.8chr3+185327034185327138185329438185329533185324117185324286185330394185330446-0.121000.001640.044552includedK562SBDS
MXESENP2ENSG00000163904.8chr3+185327034185327138185329438185329533185324117185324286185330394185330446-0.112000.003490.068512includedK562PPIL4
MXESENP2ENSG00000163904.8chr3+1853161991853163331853167451853168121853079011853079571853185521853186430.247000.000090.019821includedK562EWSR1
MXESENP2ENSG00000163904.8chr3+1853323511853325281853352671853353991853311321853311961853370861853372900.144000.000200.009791includedK562DHX30
MXESENP2ENSG00000163904.8chr3+1853162171853163331853167451853168121853079011853079571853185521853186430.240000.000510.011521includedK562SF3B4
MXESENP2ENSG00000163904.8chr3+1853079011853079571853185521853186431853040821853043021853241171853242860.148000.000760.015961includedK562SF3B4
MXESENP2ENSG00000163904.8chr3+1853079011853079571853161991853163331853039611853043021853167451853168120.188000.000010.000391includedK562SF3B4
MXESENP2ENSG00000163904.8chr3+1853079011853079571853161991853163331853039611853043021853167451853168120.147000.000410.012631includedK562SUPV3L1
MXESENP2ENSG00000163904.8chr3+185332351185332528185335267185335399185331132185331196185337086185337290-0.126000.000030.001962includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SENP2 is not avaliable on ENCORE database.