RSBN1L

General Information

Gene Name       : RSBN1L
Gene ID             : ENSG00000187257.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RSBN1L)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RSBN1LENSG00000187257.1515.7314.6215.18ENCSR000AEF
HepG2RSBN1LENSG00000187257.156.9212.249.58ENCSR985KAT
K562RSBN1LENSG00000187257.1520.5222.3321.42ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RSBN1L is not avaliable on ENCORE database.



Proteins bound to RNA
  • RSBN1L RNA is bound by 30 proteins.  







eCLIP assay for RSBN1L is not avaliable on ENCORE database.





30 proteins are bound to RSBN1L RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr77737884677378940+3'-UTR,CDS4.428984.91915K562MTPAP
chr77737883477378932+3'-UTR,CDS3.550647.32655K562UCHL5
chr77737883777378940+3'-UTR,CDS3.1660711.11566K562ZNF622
chr77737881477378913+3'-UTR,CDS4.406669.69719K562PUM1
chr77740886877408920+3'-UTR4.2068916.56181K562PUM2
chr77740892077408968+3'-UTR4.087326.12308K562PUM2
chr77732582977325900+CDS4.265504.11693K562BUD13
chr77740256377402632+CDS,intron-Proximal3.463086.67170K562ZNF622
chr77732605177326098+CDS3.436563.04831K562RBM15
chr77737888777379009+CDS3.119844.56843HepG2HLTF
chr77732588277325959+CDS4.127123.49905HepG2PPIG
chr77737885877378935+CDS3.780306.39464HepG2BCLAF1
chr77732585277325928+CDS3.089064.49816K562UCHL5
chr77732613077326190+CDS4.288623.23702K562PUM1
chr77737894077378985+CDS4.784185.78736K562ZNF622
chr77740256277402632+CDS,intron-Proximal3.204283.40321HepG2GRWD1
chr77737885277378923+CDS4.318764.21087HepG2GRWD1
chr77737885877379001+CDS3.781373.82290K562HLTF
chr77740779877407859+CDS,intron-Proximal4.749154.90235K562SF3B4
chr77739490977395029+CDS,intron-Proximal4.635684.85612K562PRPF8
chr77740763577407698+CDS,intron-Proximal4.832855.47569HepG2U2AF2
chr77732609877326174+CDS3.351604.98411K562RBM15
chr77732586177325952+CDS3.412384.08412K562RBM15
chr77740794977407998+CDS,intron-Proximal3.367283.93112K562RBM15
chr77737884877378983+CDS3.724604.83483HepG2FXR2
chr77737893577379009+CDS5.450117.04013HepG2BCLAF1
chr77737894177378996+CDS4.683586.15968K562UCHL5
chr77740776777407926+CDS,intron-Proximal3.401035.32169K562EFTUD2
chr77737885577378997+CDS3.080016.18430K562GRWD1
chr77740255277402629+CDS3.266394.58459K562GRWD1
chr77739611277396175+intron-Distal3.983375.03657K562PTBP1
chr77739318377393245+intron-Distal3.067873.73266K562KHSRP
chr77739717077397229+intron-Distal4.275274.75225K562ILF3
chr77732798177328057+intron-Distal3.757804.52298HepG2QKI
chr77740226277402365+intron-Distal,intron-Proximal3.880835.78005K562KHSRP
chr77733971377339869+intron-Distal4.989686.77551K562MATR3
chr77735219077352270+intron-Distal4.272384.39969K562TARDBP
chr77739639177396460+intron-Distal4.291623.35169HepG2U2AF2
chr77733939777339526+intron-Distal3.940486.46365K562MATR3
chr77734198577342073+intron-Distal4.379975.62258K562KHSRP
chr77739637977396465+intron-Distal4.429955.18268HepG2DDX59
chr77739662877396663+intron-Distal4.612103.78681HepG2PCBP2
chr77739324577393311+intron-Distal3.424776.39618K562KHSRP
chr77739637277396487+intron-Distal6.2477021.81142K562ILF3
chr77738346977383520+intron-Distal4.572794.22343HepG2XPO5
chr77739331877393343+intron-Distal3.398244.98593K562KHSRP
chr77739616077396220+intron-Distal4.832854.64001HepG2U2AF2
chr77739713477397211+intron-Distal5.580929.99187HepG2DDX59
chr77739815977398250+intron-Distal,intron-Proximal4.1640610.83327K562EFTUD2
chr77733186977331939+intron-Distal4.078033.72005K562MATR3
chr77738280677382932+intron-Distal3.860356.62503K562KHSRP
chr77733245477332510+intron-Distal3.273353.35050HepG2SUGP2
chr77734521677345316+intron-Distal3.889803.24603K562KHSRP
chr77736591877365973+intron-Distal,intron-Proximal4.723517.39957K562KHSRP
chr77739711777397207+intron-Distal5.654849.55779HepG2PCBP2
chr77739637977396464+intron-Distal3.656793.33460HepG2ILF3
chr77739638377396469+intron-Distal7.3203432.77093HepG2PCBP2
chr77736692977367011+intron-Distal5.0217617.06553K562KHSRP
chr77739640177396470+intron-Distal4.054054.04290K562CSTF2T
chr77736693377367067+intron-Distal5.8813611.28968K562CPSF6
chr77739710977397192+intron-Distal4.574825.31936HepG2HNRNPK
chr77736690477367000+intron-Distal4.778045.34107HepG2KHSRP
chr77739634277396458+intron-Distal5.048476.85275HepG2HNRNPK
chr77739640777396468+intron-Distal4.103993.52436K562DROSHA
chr77739617577396229+intron-Distal5.275857.91717K562PTBP1
chr77739097677391033+intron-Distal4.346074.58794K562KHSRP
chr77739103377391109+intron-Distal4.527656.09994K562KHSRP
chr77734875977348818+intron-Distal4.042233.25538K562KHSRP
chr77733244477332523+intron-Distal4.654036.48506K562MATR3
chr77736688077366927+intron-Distal4.998327.58902K562KHSRP
chr77739334377393451+intron-Distal4.2709410.35163K562KHSRP
chr77736269377362865+intron-Distal4.448845.85485K562KHSRP
chr77736586777365918+intron-Proximal4.105964.07352K562KHSRP
chr77740236577402439+intron-Proximal4.601236.28383K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RSBN1L is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RSBN1L is not available on ENCORE database.

  • 73 RBPs can affect the levels of RSBN1L.  








The Knockdown/knockout RNA-Seq assay for RSBN1L is not available on ENCORE database.





73 RBPs can affect the gene expression of RSBN1L :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RSBN1LENSG00000187257.10484.93120962.18580-0.9885010.313809.35220HepG2AKAP1
RSBN1LENSG00000187257.10566.63900796.11010-0.490503.435302.56090HepG2ASCC1
RSBN1LENSG00000187257.10410.12510591.05280-0.527205.822604.92180HepG2CKAP4
RSBN1LENSG00000187257.10559.21200708.92540-0.342202.921202.26360HepG2CELF1
RSBN1LENSG00000187257.10513.70280762.38100-0.569608.210907.03730HepG2DAZAP1
RSBN1LENSG00000187257.10438.20820546.72650-0.319202.557501.75300HepG2DDX19B
RSBN1LENSG00000187257.10562.69130791.81780-0.492803.158002.50210HepG2DDX6
RSBN1LENSG00000187257.10366.98370460.92700-0.328801.993201.38560HepG2DNAJC21
RSBN1LENSG00000187257.10294.62710456.82610-0.632806.760405.80440HepG2DNAJC2
RSBN1LENSG00000187257.10306.32590441.30560-0.526702.764401.84500HepG2EEF2
RSBN1LENSG00000187257.10249.72130367.91980-0.559103.072901.90870HepG2EFTUD2
RSBN1LENSG00000187257.10551.01610761.10400-0.466003.067502.44450HepG2EIF2S1
RSBN1LENSG00000187257.10455.62220841.06610-0.884408.631007.50490HepG2EIF4A3
RSBN1LENSG00000187257.10724.80000943.81280-0.380903.624502.95080HepG2ETF1
RSBN1LENSG00000187257.10434.60760577.68370-0.410602.770701.93510HepG2EWSR1
RSBN1LENSG00000187257.10561.84790848.73160-0.595104.866103.96500HepG2FXR1
RSBN1LENSG00000187257.10558.43650787.25400-0.495403.329502.60430HepG2G3BP1
RSBN1LENSG00000187257.10302.96560465.34250-0.619104.351803.56560HepG2HNRNPA1
RSBN1LENSG00000187257.10365.71040517.59730-0.501103.179502.44260HepG2HNRNPC
RSBN1LENSG00000187257.10586.86680797.32710-0.442103.091902.35500HepG2HNRNPK
RSBN1LENSG00000187257.10586.81370694.50480-0.243101.997201.41280HepG2HNRNPL
RSBN1LENSG00000187257.10494.36770379.663600.380801.901201.37050HepG2HNRNPLL
RSBN1LENSG00000187257.10421.82580514.17600-0.285601.853501.34830HepG2HNRNPU
RSBN1LENSG00000187257.10496.97070800.20190-0.687206.028805.07000HepG2IGF2BP2
RSBN1LENSG00000187257.10485.34180786.40190-0.696303.806902.82980HepG2LARP4
RSBN1LENSG00000187257.10571.31410849.02850-0.571504.426903.59940HepG2MAGOH
RSBN1LENSG00000187257.10543.16440853.75910-0.652405.047304.21830HepG2MATR3
RSBN1LENSG00000187257.10224.31640374.95950-0.741203.190902.06040HepG2METAP2
RSBN1LENSG00000187257.10531.51080336.635300.658804.709303.74220HepG2NSUN2
RSBN1LENSG00000187257.10547.76010735.99800-0.426204.400603.66480HepG2PCBP1
RSBN1LENSG00000187257.10570.71220748.87180-0.392003.742103.12710HepG2PTBP1
RSBN1LENSG00000187257.10527.77290721.60790-0.451303.664702.99040HepG2PUF60
RSBN1LENSG00000187257.10483.76930765.98210-0.6630011.0547010.03560HepG2PUM1
RSBN1LENSG00000187257.10611.59740765.44530-0.323702.470801.83720HepG2PUM2
RSBN1LENSG00000187257.10432.16510602.09740-0.478404.893404.11640HepG2PUS1
RSBN1LENSG00000187257.10908.70070736.115000.303801.997701.41780HepG2RBM25
RSBN1LENSG00000187257.10569.44890833.45040-0.549506.656305.87900HepG2NELFE
RSBN1LENSG00000187257.10359.54460471.08240-0.389801.902101.32360HepG2RPLP0
RSBN1LENSG00000187257.10231.99470348.58640-0.587403.473602.79320HepG2RPS19
RSBN1LENSG00000187257.10358.73490457.90240-0.352102.413401.80560HepG2SAFB2
RSBN1LENSG00000187257.10632.58090779.73260-0.301702.501401.93500HepG2SF3B4
RSBN1LENSG00000187257.10311.12960534.00180-0.7793010.526009.40360HepG2SMN1
RSBN1LENSG00000187257.10442.46780624.96110-0.498202.683601.74270HepG2SMNDC1
RSBN1LENSG00000187257.10576.44780418.140000.463101.988101.33120HepG2SNRNP70
RSBN1LENSG00000187257.10548.25050712.43890-0.377903.613402.91520HepG2SRSF5
RSBN1LENSG00000187257.10597.16050810.27680-0.440305.539104.71480HepG2SUCLG1
RSBN1LENSG00000187257.10263.27330499.65630-0.9244010.503209.63790HepG2TIAL1
RSBN1LENSG00000187257.10324.54350504.08180-0.635206.573705.77020HepG2TRIM56
RSBN1LENSG00000187257.10719.26700490.665900.551704.336203.55880HepG2U2AF1
RSBN1LENSG00000187257.10427.47930556.32750-0.380103.042602.41960HepG2UTP3
RSBN1LENSG00000187257.101578.634301242.227800.345602.892302.22410K562AKAP8L
RSBN1LENSG00000187257.10324.50340448.46680-0.466802.787601.73000K562CCAR1
RSBN1LENSG00000187257.101224.501601519.19020-0.311103.261302.05280K562CPEB4
RSBN1LENSG00000187257.10690.28390858.63370-0.314902.190301.48500K562CPSF6
RSBN1LENSG00000187257.101632.776101336.781000.288503.094302.16030K562DKC1
RSBN1LENSG00000187257.10912.786101109.65520-0.281802.590201.43080K562EIF2S1
RSBN1LENSG00000187257.10693.12520920.62720-0.409503.826302.89970K562EIF3G
RSBN1LENSG00000187257.10816.280901115.39390-0.450403.821502.81450K562FIP1L1
RSBN1LENSG00000187257.101183.473701553.49120-0.392503.238602.42310K562GRSF1
RSBN1LENSG00000187257.101504.03550939.464100.678802.942101.67700K562HNRNPA2B1
RSBN1LENSG00000187257.10631.46290812.47230-0.363602.514801.94290K562HNRNPC
RSBN1LENSG00000187257.101103.017301512.15980-0.455204.143803.17600K562HSPD1
RSBN1LENSG00000187257.101817.437401476.875000.299302.480901.62710K562MBNL1
RSBN1LENSG00000187257.10539.28040800.19550-0.569305.316404.07870K562METAP2
RSBN1LENSG00000187257.101518.531801035.179700.552702.632701.77570K562NAA15
RSBN1LENSG00000187257.10938.545901266.27230-0.432103.690302.72140K562PPIG
RSBN1LENSG00000187257.10539.62480728.44490-0.432902.981902.03800K562PSIP1
RSBN1LENSG00000187257.101013.157701311.62120-0.372503.585502.84050K562PTBP1
RSBN1LENSG00000187257.102078.903101232.011900.7547010.224909.22620K562PUS1
RSBN1LENSG00000187257.101793.600401200.358000.579309.724408.63890K562RBM15
RSBN1LENSG00000187257.10976.868801257.96510-0.364902.920602.05350K562RBM22
RSBN1LENSG00000187257.10464.87630664.50770-0.515404.230603.00100K562RCC2
RSBN1LENSG00000187257.10893.300801169.41680-0.388603.184401.35390K562RECQL
RSBN1LENSG00000187257.101448.18150862.929900.746803.173801.82260K562SNRNP200
RSBN1LENSG00000187257.10478.89590629.94630-0.395502.451901.50070K562SRFBP1
RSBN1LENSG00000187257.101058.997001301.40490-0.297401.956201.35480K562TARDBP
RSBN1LENSG00000187257.10873.467901255.31980-0.523206.124804.83730K562TIA1
RSBN1LENSG00000187257.10509.93060700.65480-0.458402.849901.89960K562TIAL1
RSBN1LENSG00000187257.10569.40640744.23910-0.386302.469901.58520K562TRIM56
RSBN1LENSG00000187257.101104.893601281.41500-0.213802.004201.38600K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RSBN1L is not available on ENCORE database.





7 RBPs can affect the splicing of RSBN1L :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERSBN1LENSG00000187257.10chr7+773979777739812077394811773949497740246377402631-0.071000.000180.00812excludedK562AKAP8L
SERSBN1LENSG00000187257.10chr7+7736680377366904773657267736584377378740773793810.059000.002090.02277includedK562AQR
SERSBN1LENSG00000187257.10chr7+773979777739812077394811773949497740246377402631-0.077000.000030.00082excludedK562PUS1
SERSBN1LENSG00000187257.10chr7+7736680377366904773657267736584377378740773793810.179000.002090.08665includedK562EFTUD2
SERSBN1LENSG00000187257.10chr7+773979777739812077394811773949497740246377402631-0.068000.000150.00807excludedK562UTP18
SERSBN1LENSG00000187257.10chr7+773979777739812077394811773949497740246377402631-0.052000.003170.06640excludedK562AGGF1
A3SSRSBN1LENSG00000187257.10chr7+7740762677407763774076547740776377402463774026310.075000.000020.00023longerK562AQR
MXERSBN1LENSG00000187257.10chr7+7737874077379381773948117739494977365726773658437739797777398120-0.206000.000250.012962includedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RSBN1L is not avaliable on ENCORE database.