RPS4Y1

General Information

Gene Name       : RPS4Y1
Gene ID             : ENSG00000129824.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RPS4Y1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RPS4Y1ENSG00000129824.150.000.000.00ENCSR000AEF
HepG2RPS4Y1ENSG00000129824.15635.84562.52599.18ENCSR985KAT
K562RPS4Y1ENSG00000129824.150.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RPS4Y1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • RPS4Y1 RNA is bound by 23 proteins.  







eCLIP assay for RPS4Y1 is not avaliable on ENCORE database.





23 proteins are bound to RPS4Y1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrY27136862713738+CDS,intron-Proximal3.0911011.06231HepG2ZNF800
chrY27137552713825+CDS,intron-Proximal3.6616615.45430HepG2PRPF8
chrY27137382713790+CDS,intron-Proximal3.796499.50801HepG2ZNF800
chrY27136852713738+CDS,intron-Proximal3.0818413.86110HepG2PPIG
chrY27347692734889+CDS,intron-Distal,intron-Proximal3.224413.30959HepG2AQR
chrY27136922713771+CDS3.6767711.88459HepG2LIN28B
chrY27122212712298+CDS3.0673427.55252HepG2BCLAF1
chrY27136872713704+CDS3.257534.76888HepG2UCHL5
chrY27331292733212+CDS,intron-Distal3.188039.97062HepG2G3BP1
chrY27137402713763+CDS3.0786413.99628HepG2GRWD1
chrY27137632713787+CDS,intron-Proximal3.0530310.72164HepG2GRWD1
chrY27225642722649+CDS,intron-Proximal3.2789713.81627HepG2SF3A3
chrY27348312734932+CDS,intron-Distal,intron-Proximal3.012018.90361HepG2G3BP1
chrY27136862713706+CDS,intron-Proximal3.7602414.40867HepG2GRWD1
chrY27227282722751+CDS3.589444.86632HepG2G3BP1
chrY27137512713774+CDS3.691984.12907HepG2FASTKD2
chrY27122312712289+CDS3.4132522.15783HepG2GRWD1
chrY27137082713737+CDS3.2173818.68516HepG2GRWD1
chrY27122892712298+CDS4.0365713.43221HepG2GRWD1
chrY27159722715987+intron-Distal4.770929.67936HepG2HNRNPM
chrY27165242716576+intron-Distal3.2888510.05312HepG2SUGP2
chrY27169422716974+intron-Distal3.026706.17240HepG2HNRNPK
chrY27147502714781+intron-Distal3.218954.60759HepG2BCCIP
chrY27193532719372+intron-Distal3.403764.57452HepG2SUGP2
chrY27235932723711+intron-Distal3.593614.38996HepG2HNRNPM
chrY27165262716577+intron-Distal4.0955717.67801HepG2BCCIP
chrY27169742717026+intron-Distal3.1404510.74926HepG2HNRNPK
chrY27166962716753+intron-Distal6.4785412.85805HepG2HNRNPM
chrY27197142719755+intron-Distal5.013126.25174HepG2MATR3
chrY27155382715572+intron-Distal3.882198.12916HepG2BCCIP
chrY27173442717484+intron-Distal3.4361311.46124HepG2MATR3
chrY27157222715770+intron-Distal5.4710511.58327HepG2HNRNPM
chrY27207112720766+intron-Distal3.405099.32175HepG2SUGP2
chrY27164242716500+intron-Distal3.5965711.49007HepG2BCCIP
chrY27177662717823+intron-Distal4.0755513.91814HepG2SUGP2
chrY27148542714947+intron-Distal5.3804521.78350HepG2EXOSC5
chrY27165982716615+intron-Distal4.368707.17878HepG2HNRNPM
chrY27295132729571+intron-Distal4.335404.66737HepG2MATR3
chrY27166352716682+intron-Distal5.3863017.37225HepG2HNRNPM
chrY27173902717444+intron-Distal3.2113215.14271HepG2SUGP2
chrY27199662720006+intron-Distal3.107107.00841HepG2SUGP2
chrY27197122719755+intron-Distal3.371636.23804HepG2HNRNPM
chrY27163482716402+intron-Distal4.324869.87507HepG2BCCIP
chrY27165902716633+intron-Distal3.529704.60759HepG2BCCIP
chrY27165972716663+intron-Distal4.556117.99206HepG2EXOSC5
chrY27175202717640+intron-Distal3.5652819.56244HepG2HNRNPM
chrY27156612715745+intron-Distal5.5964519.90506HepG2EXOSC5
chrY27278412727906+intron-Distal4.016696.45086HepG2MATR3
chrY27198972719935+intron-Distal4.659986.08205HepG2MATR3
chrY27171552717218+intron-Distal3.1578310.97745HepG2SUGP2
chrY27218962721958+intron-Distal3.810753.64484HepG2HNRNPC
chrY27279542728005+intron-Distal4.258804.53347HepG2SUGP2
chrY27202972720354+intron-Distal4.005925.95721HepG2MATR3
chrY27194352719480+intron-Distal3.822259.81425HepG2SUGP2
chrY27141342714205+intron-Distal3.477206.67015HepG2KHSRP
chrY27158112715852+intron-Distal4.4336313.17141HepG2HNRNPM
chrY27166902716715+intron-Distal4.650388.29687HepG2EXOSC5
chrY27133772713439+intron-Distal3.282664.65237HepG2U2AF2
chrY27165232716575+intron-Distal4.9822119.23596HepG2HNRNPM
chrY27165062716526+intron-Distal5.015666.50992HepG2BCCIP
chrY27146232714684+intron-Distal7.5705950.47344HepG2HNRNPM
chrY27155892715652+intron-Distal4.458559.49309HepG2EXOSC5
chrY27347802734813+intron-Distal,intron-Proximal4.069185.34167HepG2SF3B4
chrY27194802719544+intron-Distal3.609059.14158HepG2SUGP2
chrY27183312718355+intron-Distal4.6877016.10172HepG2HNRNPM
chrY27176842717753+intron-Distal3.3346613.26779HepG2SUGP2
chrY27294642729586+intron-Distal4.191763.14375HepG2RBFOX2
chrY27146892714718+intron-Distal4.215635.51938HepG2BCCIP
chrY27292952729364+intron-Distal4.602245.70028HepG2MATR3
chrY27156812715728+intron-Distal3.372083.61620HepG2BCCIP
chrY27160262716063+intron-Distal3.024224.43124HepG2HNRNPM
chrY27194352719484+intron-Distal3.9396614.02325HepG2HNRNPM
chrY27289622729077+intron-Distal4.909346.76922HepG2PTBP1
chrY27315972731660+intron-Distal3.426513.84025HepG2SUGP2
chrY27146852714771+intron-Distal5.3236318.03482HepG2EXOSC5
chrY27163212716348+intron-Distal3.875897.44429HepG2BCCIP
chrY27178752717918+intron-Distal3.380509.06492HepG2SUGP2
chrY27182822718327+intron-Distal4.8961921.93757HepG2HNRNPM
chrY27140382714079+intron-Distal4.7588512.24874HepG2HNRNPM
chrY27147402714817+intron-Distal5.6494038.56679HepG2HNRNPM
chrY27287032728741+intron-Distal3.881213.16028HepG2SUGP2
chrY27159872716026+intron-Distal4.5739310.88721HepG2HNRNPM
chrY27154652715563+intron-Distal4.5924218.13561HepG2EXOSC5
chrY27148732714974+intron-Distal3.4599616.84692HepG2SUGP2
chrY27196402719767+intron-Distal3.566415.66244HepG2EXOSC5
chrY27159882716021+intron-Distal3.088983.73379HepG2BCCIP
chrY27293342729424+intron-Distal3.977536.77642HepG2SUGP2
chrY27150612715202+intron-Distal5.8983626.98284HepG2EXOSC5
chrY27288492728912+intron-Distal4.224053.79098HepG2SUGP2
chrY27157422715784+intron-Distal3.782277.20558HepG2BCCIP
chrY27159592715972+intron-Distal5.159239.71187HepG2HNRNPM
chrY27152952715345+intron-Distal3.678146.58589HepG2BCCIP
chrY27164052716501+intron-Distal4.6646131.46926HepG2EXOSC5
chrY27157892715811+intron-Distal4.804349.46032HepG2HNRNPM
chrY27148962714961+intron-Distal4.6215819.62268HepG2BCCIP
chrY27160212716068+intron-Distal3.9558210.04300HepG2BCCIP
chrY27150812715107+intron-Distal6.0116613.96605HepG2HNRNPM
chrY27205172720562+intron-Distal4.017189.61167HepG2HNRNPM
chrY27288612728923+intron-Distal4.478285.01910HepG2MATR3
chrY27193752719432+intron-Distal3.6489911.64365HepG2HNRNPM
chrY27152492715340+intron-Distal4.6035615.41027HepG2EXOSC5
chrY27156892715722+intron-Distal4.256866.42612HepG2HNRNPM
chrY27262472726329+intron-Distal4.651345.68226HepG2HNRNPM
chrY27193722719417+intron-Distal3.093756.91240HepG2SUGP2
chrY27173652717390+intron-Distal3.154687.00841HepG2SUGP2
chrY27296712729713+intron-Distal3.025973.23296HepG2SUGP2
chrY27204472720492+intron-Distal3.952789.46305HepG2RBFOX2
chrY27166442716678+intron-Distal5.721538.33572HepG2BCCIP
chrY27291252729163+intron-Distal4.082983.63454HepG2SUGP2
chrY27194432719484+intron-Distal4.737404.51059HepG2EXOSC5
chrY27214632721547+intron-Distal3.1407214.50368HepG2U2AF2
chrY27148932714947+intron-Distal3.9708712.04962HepG2HNRNPM
chrY27151122715178+intron-Distal6.6034042.12891HepG2HNRNPM
chrY27159392716056+intron-Distal5.0229820.41501HepG2EXOSC5
chrY27151292715183+intron-Distal4.250429.82147HepG2BCCIP
chrY27183552718398+intron-Distal5.1921522.90879HepG2HNRNPM
chrY27175082717626+intron-Distal3.8354011.41528HepG2MATR3
chrY27165012716566+intron-Distal5.3804521.78350HepG2EXOSC5
chrY27175832717649+intron-Distal3.886348.96460HepG2BCCIP
chrY27146842714719+intron-Distal7.8324449.92343HepG2HNRNPM
chrY27266302726676+intron-Distal3.946833.54208HepG2SUGP2
chrY27175402717684+intron-Distal3.3703622.54400HepG2SUGP2
chrY27290162729111+intron-Distal4.674445.72657HepG2MATR3
chrY27204432720482+intron-Distal3.075006.11961HepG2SUGP2
chrY27225562722636+intron-Proximal5.1476310.14692HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RPS4Y1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RPS4Y1 is not available on ENCORE database.

  • 82 RBPs can affect the levels of RPS4Y1.  








The Knockdown/knockout RNA-Seq assay for RPS4Y1 is not available on ENCORE database.





82 RBPs can affect the gene expression of RPS4Y1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RPS4Y1ENSG00000129824.116159.3915011068.28420-0.8456012.0979011.06450HepG2AKAP1
RPS4Y1ENSG00000129824.113886.119804671.25680-0.265503.471402.62330HepG2AKAP8L
RPS4Y1ENSG00000129824.117408.279809158.23760-0.305902.393401.65850HepG2ASCC1
RPS4Y1ENSG00000129824.114204.419503368.489900.319703.057002.43120HepG2BOP1
RPS4Y1ENSG00000129824.115714.298904700.520000.281702.403401.68080HepG2CALR
RPS4Y1ENSG00000129824.114618.195405994.36100-0.376302.467101.55350HepG2CCAR1
RPS4Y1ENSG00000129824.113538.423804648.28360-0.393606.917605.95140HepG2CKAP4
RPS4Y1ENSG00000129824.114007.767106375.40880-0.669705.026103.99000HepG2CNOT7
RPS4Y1ENSG00000129824.114333.131803092.470900.486605.877304.90860HepG2CPSF6
RPS4Y1ENSG00000129824.115057.256604194.546600.269702.432301.48090HepG2YBX3
RPS4Y1ENSG00000129824.116455.388307451.70880-0.207102.086701.42990HepG2DAZAP1
RPS4Y1ENSG00000129824.113547.150805053.71890-0.510707.326206.27440HepG2DDX21
RPS4Y1ENSG00000129824.115963.340704945.618800.269902.890501.95480HepG2DDX24
RPS4Y1ENSG00000129824.115820.4802010602.92600-0.8653014.7591013.42670HepG2DDX3X
RPS4Y1ENSG00000129824.113223.320404151.26860-0.365002.575001.82500HepG2DDX55
RPS4Y1ENSG00000129824.115596.137509107.31550-0.702608.778707.74260HepG2DDX6
RPS4Y1ENSG00000129824.113191.101804372.50260-0.454404.817903.63190HepG2EEF2
RPS4Y1ENSG00000129824.115546.850608755.89450-0.658609.040308.00580HepG2EIF2S1
RPS4Y1ENSG00000129824.113841.029804772.53220-0.313303.679402.45530HepG2EIF3G
RPS4Y1ENSG00000129824.114999.211009676.68500-0.9528015.0555013.58200HepG2EIF4A3
RPS4Y1ENSG00000129824.119273.267907352.481000.334706.719205.51670HepG2EIF4G1
RPS4Y1ENSG00000129824.119036.982007043.042400.359503.925302.96540HepG2EIF4G2
RPS4Y1ENSG00000129824.116939.554508581.11820-0.306306.181005.34290HepG2ETF1
RPS4Y1ENSG00000129824.114999.425806199.41000-0.310403.365602.50280HepG2FUBP3
RPS4Y1ENSG00000129824.115137.941109762.18250-0.9260017.4792015.90500HepG2FXR1
RPS4Y1ENSG00000129824.114421.151709056.48020-1.0345018.9240017.25960HepG2G3BP1
RPS4Y1ENSG00000129824.116533.250309613.79870-0.557307.109705.66890HepG2G3BP2
RPS4Y1ENSG00000129824.113588.774504813.09470-0.423504.252102.98700HepG2GNB2L1
RPS4Y1ENSG00000129824.112350.740203505.59410-0.576506.074505.15150HepG2GPKOW
RPS4Y1ENSG00000129824.113240.351704158.25570-0.359804.029203.27110HepG2HNRNPA1
RPS4Y1ENSG00000129824.113450.834104625.25830-0.422605.200304.27300HepG2HNRNPC
RPS4Y1ENSG00000129824.117072.486609169.04870-0.374604.012503.18530HepG2HNRNPK
RPS4Y1ENSG00000129824.117548.014706787.614900.153102.470501.82930HepG2HNRNPL
RPS4Y1ENSG00000129824.113940.160204594.68130-0.221703.362202.69970HepG2HNRNPU
RPS4Y1ENSG00000129824.115962.508509205.93630-0.626608.330307.22540HepG2IGF2BP2
RPS4Y1ENSG00000129824.115515.119504693.320400.232705.183404.20720HepG2ILF2
RPS4Y1ENSG00000129824.115039.155104250.238400.245503.014501.95370HepG2KIF1C
RPS4Y1ENSG00000129824.113977.923506247.63030-0.651305.786503.96910HepG2KRR1
RPS4Y1ENSG00000129824.113973.637304950.94140-0.317203.230201.91950HepG2LIN28B
RPS4Y1ENSG00000129824.113808.217209765.58530-1.3586034.0363031.94560HepG2MAGOH
RPS4Y1ENSG00000129824.115366.178209820.43520-0.8719013.3233012.01200HepG2MATR3
RPS4Y1ENSG00000129824.112658.401903714.78370-0.482702.846301.77770HepG2METAP2
RPS4Y1ENSG00000129824.114318.1765010051.91840-1.2190026.7477024.92480HepG2NCBP2
RPS4Y1ENSG00000129824.118443.167607389.155800.192302.017801.36400HepG2NOL12
RPS4Y1ENSG00000129824.115472.296208952.61010-0.710209.979408.62770HepG2PABPC4
RPS4Y1ENSG00000129824.115714.291109369.62060-0.7134030.9077029.25410HepG2PCBP1
RPS4Y1ENSG00000129824.112100.766602935.31460-0.482607.791605.81630HepG2PKM
RPS4Y1ENSG00000129824.114391.904403455.593600.345806.539505.40660HepG2PRPF4
RPS4Y1ENSG00000129824.113556.260609534.05020-1.42270108.11200105.96090HepG2PTBP1
RPS4Y1ENSG00000129824.114841.086107053.88950-0.543105.735504.91860HepG2PUF60
RPS4Y1ENSG00000129824.114635.556107488.35890-0.6919017.9578016.71490HepG2PUM1
RPS4Y1ENSG00000129824.115831.772007482.67550-0.359604.741803.87520HepG2PUM2
RPS4Y1ENSG00000129824.113222.921204736.20650-0.5554010.847309.76430HepG2PUS1
RPS4Y1ENSG00000129824.114758.0585010325.37560-1.1177050.9256048.89860HepG2QKI
RPS4Y1ENSG00000129824.119956.125207172.268300.4731011.7798010.86460HepG2RBM22
RPS4Y1ENSG00000129824.115690.603509371.03120-0.7196016.7120015.14350HepG2RBM25
RPS4Y1ENSG00000129824.114500.7634010610.39040-1.2372088.6972086.73260HepG2NELFE
RPS4Y1ENSG00000129824.115139.365509882.30370-0.9433054.5452052.55380HepG2RECQL
RPS4Y1ENSG00000129824.112095.339803453.83140-0.7210014.2086012.95690HepG2RPS19
RPS4Y1ENSG00000129824.113481.525405244.55660-0.591108.734707.37450HepG2RPS2
RPS4Y1ENSG00000129824.113792.200006403.71740-0.755907.777606.45600HepG2RPS3A
RPS4Y1ENSG00000129824.114129.586305353.73580-0.374503.886302.59710HepG2RPS5
RPS4Y1ENSG00000129824.114930.386404091.785900.268905.429204.57970HepG2SAFB2
RPS4Y1ENSG00000129824.115631.107609925.97810-0.8178041.4822039.71040HepG2SF3B4
RPS4Y1ENSG00000129824.113889.723504771.74600-0.294807.549606.56680HepG2SMN1
RPS4Y1ENSG00000129824.113876.4225010360.65330-1.41830131.67480129.65740HepG2SRSF1
RPS4Y1ENSG00000129824.115090.855106965.10030-0.452209.062008.01710HepG2SRSF5
RPS4Y1ENSG00000129824.116244.578008429.01320-0.4328013.1335012.08930HepG2SRSF9
RPS4Y1ENSG00000129824.115700.039507033.61490-0.303306.358105.63890HepG2SSB
RPS4Y1ENSG00000129824.116047.460607920.88530-0.389307.674106.72350HepG2SUCLG1
RPS4Y1ENSG00000129824.117259.788009312.78420-0.359306.757805.94930HepG2TAF15
RPS4Y1ENSG00000129824.114222.039803260.678400.372703.776102.94470HepG2TARDBP
RPS4Y1ENSG00000129824.115954.216608556.94120-0.523209.584408.04320HepG2TIA1
RPS4Y1ENSG00000129824.111586.715104464.71270-1.4925066.5660064.73100HepG2TIAL1
RPS4Y1ENSG00000129824.114553.033306891.91260-0.5981011.425309.44720HepG2TUFM
RPS4Y1ENSG00000129824.112803.082204804.09490-0.7773013.9873012.54140HepG2U2AF1
RPS4Y1ENSG00000129824.112947.164105870.10190-0.994103.286102.20920HepG2U2AF2
RPS4Y1ENSG00000129824.113960.276402441.253200.697909.663608.24800HepG2UCHL5
RPS4Y1ENSG00000129824.113916.844504630.49770-0.241504.116203.29050HepG2UPF1
RPS4Y1ENSG00000129824.113890.375504470.57150-0.200502.917702.30630HepG2UTP3
RPS4Y1ENSG00000129824.114020.838905429.41440-0.433302.757501.70500HepG2XRCC6
RPS4Y1ENSG00000129824.112956.659003410.19580-0.205903.136902.42950HepG2ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RPS4Y1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RPS4Y1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RPS4Y1 is not avaliable on ENCORE database.