RPH3AL

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RPH3AL	ENSG00000181031.15	0.09	0.15	0.12	ENCSR000AEF
HepG2	RPH3AL	ENSG00000181031.15	9.94	3.62	6.78	ENCSR985KAT
K562	RPH3AL	ENSG00000181031.15	0.55	0.26	0.41	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RPH3AL is not avaliable on ENCORE database.

Proteins bound to RNA

RPH3AL RNA is bound by 36 proteins.

eCLIP assay for RPH3AL is not avaliable on ENCORE database.

36 proteins are bound to RPH3AL RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	62384	62484	-	3'-UTR,intron-Distal	4.09405	3.41442	HepG2	HNRNPK
chr17	63367	63412	-	3'-UTR,intron-Distal,intron-Proximal	4.09259	3.31570	HepG2	HNRNPK
chr17	235920	236009	-	5'-UTR,intron-Distal	3.29605	4.38865	HepG2	RBFOX2
chr17	235890	235992	-	5'-UTR,intron-Distal	5.77818	13.55344	HepG2	CSTF2T
chr17	188700	188767	-	5'-UTR,intron-Distal,intron-Proximal	4.88356	12.12734	HepG2	CSTF2T
chr17	191014	191089	-	5'-UTR,intron-Distal	4.39141	6.99039	HepG2	CSTF2T
chr17	188767	188825	-	5'-UTR,intron-Distal	5.71853	12.12716	HepG2	CSTF2T
chr17	169188	169308	-	CDS,intron-Distal,intron-Proximal	4.01704	11.11819	HepG2	PPIG
chr17	171059	171153	-	CDS,intron-Distal,intron-Proximal	4.22906	9.58474	HepG2	PPIG
chr17	169308	169342	-	CDS,intron-Distal,intron-Proximal	3.18188	3.50686	HepG2	PPIG
chr17	169319	169413	-	CDS,intron-Distal,intron-Proximal	3.79492	10.36120	HepG2	SF3B4
chr17	171192	171268	-	CDS,intron-Distal,intron-Proximal	4.17623	6.74156	HepG2	SF3B4
chr17	69408	69484	-	CDS,intron-Distal,intron-Proximal	4.53520	6.92541	HepG2	PPIG
chr17	177253	177306	-	CDS,intron-Distal,intron-Proximal	3.34360	5.21025	HepG2	PPIG
chr17	151975	152009	-	intron-Distal	3.90879	3.63902	HepG2	CSTF2T
chr17	95555	95604	-	intron-Distal	4.11981	3.12328	HepG2	DDX52
chr17	169648	169714	-	intron-Distal	4.66469	3.92947	HepG2	DDX59
chr17	95343	95389	-	intron-Distal	4.83301	16.21209	HepG2	HNRNPL
chr17	229970	230013	-	intron-Distal	4.63326	3.59983	HepG2	DROSHA
chr17	230720	230758	-	intron-Distal	4.56920	9.66216	HepG2	RBFOX2
chr17	189864	189915	-	intron-Distal	5.22104	7.35173	HepG2	CSTF2T
chr17	94578	94615	-	intron-Distal	4.71456	26.46997	HepG2	HNRNPL
chr17	190098	190154	-	intron-Distal	6.51287	24.43493	HepG2	FAM120A
chr17	135629	135657	-	intron-Distal	4.00511	3.63902	HepG2	CSTF2T
chr17	164527	164587	-	intron-Distal	3.22872	7.56701	HepG2	FAM120A
chr17	148825	148885	-	intron-Distal	3.13663	3.69530	HepG2	CSTF2T
chr17	94564	94605	-	intron-Distal	5.36409	33.48773	HepG2	AGGF1
chr17	139439	139497	-	intron-Distal	3.54885	5.16304	HepG2	CSTF2T
chr17	189964	190004	-	intron-Distal	4.90817	5.92397	HepG2	FAM120A
chr17	94557	94650	-	intron-Distal	6.30976	50.56917	HepG2	XPO5
chr17	192643	192775	-	intron-Distal	4.49628	5.20135	HepG2	QKI
chr17	155852	155880	-	intron-Distal	4.81541	7.44133	HepG2	CSTF2T
chr17	94729	94824	-	intron-Distal	5.66615	34.39011	HepG2	AGGF1
chr17	164525	164659	-	intron-Distal	5.80798	11.07288	HepG2	SAFB
chr17	154297	154330	-	intron-Distal	4.13161	4.10564	HepG2	CSTF2T
chr17	235481	235551	-	intron-Distal	5.54885	13.05566	HepG2	CSTF2T
chr17	231284	231353	-	intron-Distal	4.42911	5.15063	HepG2	CSTF2T
chr17	154860	154920	-	intron-Distal	4.72703	5.59072	HepG2	HNRNPK
chr17	94449	94527	-	intron-Distal	4.02759	3.21613	HepG2	DDX52
chr17	225240	225339	-	intron-Distal	4.74070	4.42259	HepG2	DDX59
chr17	70076	70141	-	intron-Distal	5.05745	5.05990	HepG2	EXOSC5
chr17	231249	231268	-	intron-Distal	3.57147	4.33898	HepG2	FAM120A
chr17	154656	154701	-	intron-Distal	5.07018	5.41835	HepG2	DDX59
chr17	206415	206466	-	intron-Distal	4.19684	3.28572	K562	HNRNPM
chr17	165741	165763	-	intron-Distal	3.48726	3.94728	HepG2	SAFB
chr17	155926	155964	-	intron-Distal	4.26690	8.42985	HepG2	CSTF2T
chr17	155163	155209	-	intron-Distal	4.41307	10.05876	HepG2	CSTF2T
chr17	190545	190584	-	intron-Distal	6.32837	15.02121	HepG2	FAM120A
chr17	70145	70194	-	intron-Distal	6.12511	13.33206	HepG2	HNRNPM
chr17	155445	155521	-	intron-Distal	5.03546	17.82135	HepG2	CSTF2T
chr17	230050	230161	-	intron-Distal	5.76881	14.11761	HepG2	FAM120A
chr17	230943	231008	-	intron-Distal	6.61001	24.55695	HepG2	RBFOX2
chr17	189915	190010	-	intron-Distal	5.63569	24.60388	HepG2	CSTF2T
chr17	156746	156790	-	intron-Distal	4.55892	4.86316	HepG2	FAM120A
chr17	230240	230248	-	intron-Distal	3.95444	6.29610	HepG2	RBFOX2
chr17	166347	166402	-	intron-Distal	3.84416	3.63122	HepG2	PRPF4
chr17	160231	160303	-	intron-Distal	4.47459	15.09805	HepG2	CSTF2T
chr17	165269	165315	-	intron-Distal	3.30165	3.71286	HepG2	ZC3H11A
chr17	230887	230935	-	intron-Distal	3.37073	5.25366	HepG2	FAM120A
chr17	154396	154444	-	intron-Distal	4.85441	7.60000	HepG2	CSTF2T
chr17	174135	174189	-	intron-Distal	3.79509	6.03429	HepG2	CSTF2T
chr17	154524	154574	-	intron-Distal	4.27003	7.48189	HepG2	CSTF2T
chr17	235259	235313	-	intron-Distal	3.25163	5.82968	HepG2	CSTF2T
chr17	95039	95171	-	intron-Distal	4.59035	20.06482	HepG2	AGGF1
chr17	155935	156032	-	intron-Distal	3.86007	7.14301	HepG2	FAM120A
chr17	94485	94528	-	intron-Distal	4.67494	5.82840	HepG2	GTF2F1
chr17	189451	189518	-	intron-Distal,intron-Proximal	4.80557	20.05093	HepG2	CSTF2T
chr17	141921	142004	-	intron-Distal	3.45820	6.96229	HepG2	CSTF2T
chr17	201298	201377	-	intron-Distal	4.67085	5.57311	HepG2	RBFOX2
chr17	166897	166944	-	intron-Distal	4.22744	4.02776	HepG2	FAM120A
chr17	167190	167255	-	intron-Distal	3.40879	3.69530	HepG2	CSTF2T
chr17	156746	156798	-	intron-Distal	4.12978	11.49466	HepG2	CSTF2T
chr17	170394	170420	-	intron-Distal	3.08404	5.89444	HepG2	CSTF2T
chr17	230789	230866	-	intron-Distal	6.79374	29.24420	HepG2	RBFOX2
chr17	164584	164641	-	intron-Distal	4.49498	5.54343	HepG2	EIF3D
chr17	165015	165050	-	intron-Distal	3.76060	3.19526	HepG2	CSTF2T
chr17	159413	159492	-	intron-Distal	5.65701	12.62224	HepG2	CSTF2T
chr17	94728	94796	-	intron-Distal	4.72257	16.16283	HepG2	HNRNPL
chr17	167197	167258	-	intron-Distal	3.99474	4.10323	HepG2	PRPF4
chr17	164394	164419	-	intron-Distal	3.21667	3.94332	HepG2	FAM120A
chr17	165261	165361	-	intron-Distal	4.68377	8.43474	HepG2	SAFB
chr17	170905	170958	-	intron-Distal	4.46016	4.10564	HepG2	CSTF2T
chr17	190162	190224	-	intron-Distal	4.15476	4.24431	HepG2	RBFOX2
chr17	149102	149156	-	intron-Distal	4.35810	5.15063	HepG2	CSTF2T
chr17	71764	71932	-	intron-Distal	5.31923	6.47872	HepG2	EXOSC5
chr17	94126	94232	-	intron-Distal	4.22142	10.14343	HepG2	PCBP2
chr17	190034	190069	-	intron-Distal	4.88611	7.35173	HepG2	CSTF2T
chr17	234867	234923	-	intron-Distal	4.78808	6.92529	HepG2	RBFOX2
chr17	229808	229867	-	intron-Distal	3.77187	4.25630	HepG2	DROSHA
chr17	157778	157818	-	intron-Distal	3.01835	3.12257	HepG2	CSTF2T
chr17	164528	164584	-	intron-Distal	4.29631	8.10734	HepG2	EIF3D
chr17	229771	229863	-	intron-Distal	5.21020	9.20567	HepG2	FAM120A
chr17	182233	182286	-	intron-Distal	4.29960	3.40229	HepG2	CSTF2T
chr17	229939	229968	-	intron-Distal	4.13538	4.10339	HepG2	CSTF2T
chr17	231273	231329	-	intron-Distal	4.03969	7.13447	HepG2	FAM120A
chr17	95737	95841	-	intron-Distal	3.03115	6.69381	HepG2	EIF3D
chr17	94567	94720	-	intron-Distal	4.52099	4.32605	HepG2	LARP4
chr17	230408	230485	-	intron-Distal	7.35047	37.91242	HepG2	RBFOX2
chr17	155442	155540	-	intron-Distal	3.36316	3.92966	HepG2	GTF2F1
chr17	159779	159840	-	intron-Distal	4.72921	4.91906	HepG2	DDX59
chr17	70082	70140	-	intron-Distal	5.01223	18.59133	HepG2	BCCIP
chr17	151745	151821	-	intron-Distal	3.09075	6.79749	HepG2	CSTF2T
chr17	140335	140379	-	intron-Distal	3.94235	3.63902	HepG2	CSTF2T
chr17	110548	110646	-	intron-Distal	3.98844	3.15816	HepG2	PRPF4
chr17	87882	87944	-	intron-Distal	3.39264	3.55754	HepG2	U2AF2
chr17	94476	94531	-	intron-Distal	5.59121	23.53093	HepG2	AGGF1
chr17	229710	229774	-	intron-Distal	4.08404	7.82628	HepG2	CSTF2T
chr17	128914	129009	-	intron-Distal	4.22009	3.72398	HepG2	SFPQ
chr17	232172	232244	-	intron-Distal	4.90922	8.32666	HepG2	CSTF2T
chr17	185766	185835	-	intron-Distal,intron-Proximal	3.59592	4.33898	HepG2	FAM120A
chr17	91691	91744	-	intron-Distal	4.39702	4.99405	HepG2	EIF3D
chr17	174027	174104	-	intron-Distal	4.92072	11.63297	HepG2	CSTF2T
chr17	71756	71807	-	intron-Distal	5.47696	11.52296	HepG2	HNRNPM
chr17	165103	165162	-	intron-Distal	4.89543	7.34038	HepG2	PRPF4
chr17	94726	94808	-	intron-Distal	5.31550	16.84582	HepG2	XPO5
chr17	170370	170439	-	intron-Distal	4.11673	6.20526	HepG2	DDX59
chr17	206412	206468	-	intron-Distal	4.29855	4.36861	HepG2	SRSF7
chr17	179827	180082	-	intron-Distal	4.24752	6.88258	HepG2	RBFOX2
chr17	115797	115869	-	intron-Distal	4.35253	4.71804	HepG2	HLTF
chr17	164370	164420	-	intron-Distal	3.47072	3.00074	HepG2	EIF3D
chr17	235804	235890	-	intron-Distal	4.77818	12.55969	HepG2	CSTF2T
chr17	206416	206469	-	intron-Distal	5.18238	6.44072	HepG2	HNRNPM
chr17	94796	94839	-	intron-Distal	5.11471	11.69060	HepG2	HNRNPL
chr17	164130	164227	-	intron-Distal	4.36498	9.42344	HepG2	CSTF2T
chr17	94633	94655	-	intron-Distal	5.26041	28.69082	HepG2	HNRNPL
chr17	234982	235056	-	intron-Distal	3.78875	9.11109	HepG2	RBFOX2
chr17	159097	159132	-	intron-Distal	4.40965	5.60609	HepG2	CSTF2T
chr17	94649	94671	-	intron-Distal	6.06431	35.74086	HepG2	AGGF1
chr17	189076	189106	-	intron-Distal	3.82125	5.08839	HepG2	CSTF2T
chr17	155209	155269	-	intron-Distal	4.09755	16.69899	HepG2	CSTF2T
chr17	142598	142653	-	intron-Distal	4.23892	8.19675	HepG2	CSTF2T
chr17	190171	190222	-	intron-Distal	4.46050	3.47570	HepG2	FTO
chr17	231128	231177	-	intron-Distal	5.96686	14.83926	HepG2	RBFOX2
chr17	230604	230656	-	intron-Distal	4.98292	4.57154	HepG2	FAM120A
chr17	136483	136532	-	intron-Distal	4.45535	5.36332	HepG2	CSTF2T
chr17	164182	164227	-	intron-Distal	4.07257	3.49180	HepG2	SAFB
chr17	151448	151487	-	intron-Distal	4.04031	3.87340	HepG2	CSTF2T
chr17	228955	229000	-	intron-Distal	3.63412	4.35339	HepG2	CSTF2T
chr17	155728	155772	-	intron-Distal	5.17177	8.32666	HepG2	CSTF2T
chr17	94615	94633	-	intron-Distal	5.38638	30.86959	HepG2	HNRNPL
chr17	95534	95660	-	intron-Distal	5.22151	19.77295	HepG2	HNRNPL
chr17	154648	154688	-	intron-Distal	3.51605	7.07923	HepG2	CSTF2T
chr17	136017	136095	-	intron-Distal	3.98027	6.03429	HepG2	CSTF2T
chr17	152395	152470	-	intron-Distal	3.18921	5.21772	HepG2	CSTF2T
chr17	164094	164240	-	intron-Distal	3.28944	5.68363	HepG2	EIF3D
chr17	155030	155057	-	intron-Distal	3.72159	6.26465	HepG2	CSTF2T
chr17	165423	165479	-	intron-Distal	4.25227	3.24137	HepG2	EIF3D
chr17	230088	230143	-	intron-Distal	4.00774	7.58727	HepG2	CSTF2T
chr17	190102	190152	-	intron-Distal	4.20780	4.59164	HepG2	IGF2BP1
chr17	230866	230943	-	intron-Distal	7.27689	39.00750	HepG2	RBFOX2
chr17	108309	108419	-	intron-Distal	3.41002	3.73778	HepG2	EIF3D
chr17	171953	172007	-	intron-Distal	3.22493	3.00221	HepG2	CSTF2T
chr17	173636	173706	-	intron-Distal	3.20127	5.89444	HepG2	CSTF2T
chr17	94750	94789	-	intron-Distal	4.17274	3.38484	HepG2	CDC40
chr17	190096	190144	-	intron-Distal	4.26576	3.59099	HepG2	FASTKD2
chr17	159576	159605	-	intron-Distal	4.35533	4.86859	HepG2	CSTF2T
chr17	184203	184272	-	intron-Distal	4.46653	4.86859	HepG2	CSTF2T
chr17	95528	95655	-	intron-Distal	3.29496	4.64021	HepG2	YBX3
chr17	94706	94818	-	intron-Distal	3.08327	3.86751	HepG2	YBX3
chr17	166912	166979	-	intron-Distal	3.10593	3.48399	HepG2	CSTF2T
chr17	235373	235406	-	intron-Distal	4.22696	4.43116	HepG2	RBFOX2
chr17	186642	186752	-	intron-Distal	5.17682	8.29600	HepG2	CSTF2T
chr17	235821	235917	-	intron-Distal	3.94044	4.18553	HepG2	NKRF
chr17	233677	233726	-	intron-Distal	3.67563	5.32871	HepG2	CSTF2T
chr17	136605	136708	-	intron-Distal	3.99787	3.86417	HepG2	PRPF4
chr17	156816	156855	-	intron-Distal	3.72744	3.25786	HepG2	FAM120A
chr17	165411	165485	-	intron-Distal	4.30535	16.66674	HepG2	FAM120A
chr17	165887	165946	-	intron-Distal	4.36698	4.79286	HepG2	PRPF4
chr17	165268	165334	-	intron-Distal	5.35134	4.73157	HepG2	EIF3D
chr17	165413	165485	-	intron-Distal	5.44022	7.48764	HepG2	SAFB
chr17	87958	88044	-	intron-Distal	5.29643	9.48199	HepG2	PTBP1
chr17	95557	95631	-	intron-Distal	5.34495	11.88906	HepG2	XPO5
chr17	152304	152353	-	intron-Distal	3.43411	4.84557	HepG2	CSTF2T
chr17	152090	152184	-	intron-Distal	5.00229	17.08875	HepG2	CSTF2T
chr17	161142	161230	-	intron-Distal	3.28312	4.98844	HepG2	FAM120A
chr17	190162	190225	-	intron-Distal	5.73827	39.70320	HepG2	FAM120A
chr17	189457	189520	-	intron-Distal,intron-Proximal	5.33864	7.28794	HepG2	FAM120A
chr17	95338	95464	-	intron-Distal	3.08889	5.37275	HepG2	EIF3D
chr17	94650	94726	-	intron-Distal	5.12164	39.56468	HepG2	XPO5
chr17	159660	159709	-	intron-Distal	4.04352	8.19675	HepG2	CSTF2T
chr17	71754	71807	-	intron-Distal	4.56226	11.57320	HepG2	BCCIP
chr17	148949	149044	-	intron-Distal	3.75264	5.56645	HepG2	CSTF2T
chr17	165096	165164	-	intron-Distal	4.12703	6.48781	HepG2	SAFB
chr17	166911	166996	-	intron-Distal	4.26041	4.80907	HepG2	SAFB
chr17	95539	95664	-	intron-Distal	3.97208	12.74760	HepG2	EIF3D
chr17	189564	189602	-	intron-Distal	3.91733	5.80161	HepG2	CSTF2T
chr17	94837	94869	-	intron-Distal	5.40300	15.19230	HepG2	AGGF1
chr17	156528	156569	-	intron-Distal,intron-Proximal	3.88788	9.08673	HepG2	CSTF2T
chr17	155404	155579	-	intron-Distal	3.27025	3.45174	HepG2	NKRF
chr17	94869	95039	-	intron-Distal	6.07975	35.78959	HepG2	AGGF1
chr17	206433	206474	-	intron-Distal	6.28555	8.53168	HepG2	DKC1
chr17	164124	164199	-	intron-Distal	4.66814	5.11005	HepG2	PRPF4
chr17	190168	190222	-	intron-Distal	6.78528	33.52791	HepG2	CSTF2T
chr17	95586	95634	-	intron-Distal	3.72251	3.76399	HepG2	CDC40
chr17	165271	165339	-	intron-Distal	4.01695	9.04566	HepG2	FAM120A
chr17	94671	94703	-	intron-Distal	6.94829	37.63032	HepG2	AGGF1
chr17	161003	161033	-	intron-Distal	3.19089	3.46580	HepG2	CSTF2T
chr17	159983	160026	-	intron-Distal	4.55728	4.36133	HepG2	CSTF2T
chr17	156418	156464	-	intron-Distal	3.86066	8.84510	HepG2	CSTF2T
chr17	230168	230200	-	intron-Distal	4.80882	5.79972	HepG2	RBFOX2
chr17	94655	94728	-	intron-Distal	6.35030	36.86583	HepG2	HNRNPL
chr17	231219	231271	-	intron-Distal	6.83732	29.78982	HepG2	RBFOX2
chr17	133571	133644	-	intron-Distal	4.35533	5.16036	HepG2	CSTF2T
chr17	154129	154165	-	intron-Distal	3.15883	3.23466	HepG2	CSTF2T
chr17	231062	231116	-	intron-Distal	6.33446	23.14960	HepG2	RBFOX2
chr17	164581	164648	-	intron-Distal	4.98338	5.11753	HepG2	CSTF2T
chr17	94839	94917	-	intron-Distal	6.88125	23.15596	HepG2	HNRNPL
chr17	160177	160231	-	intron-Distal	4.68973	11.88189	HepG2	CSTF2T
chr17	206413	206471	-	intron-Distal	3.15382	4.94516	HepG2	IGF2BP1
chr17	228853	229009	-	intron-Distal	4.96409	6.55621	HepG2	DROSHA
chr17	160694	160772	-	intron-Distal	5.55833	10.82255	HepG2	CSTF2T
chr17	71824	71898	-	intron-Distal	5.67089	11.50362	HepG2	HNRNPM
chr17	161146	161216	-	intron-Distal	4.61146	9.17322	HepG2	CSTF2T
chr17	70077	70141	-	intron-Distal	7.00905	31.46537	HepG2	HNRNPM
chr17	94092	94250	-	intron-Distal	3.82457	3.31570	HepG2	HNRNPK
chr17	160418	160467	-	intron-Distal	4.94030	7.84504	HepG2	CSTF2T
chr17	232070	232119	-	intron-Distal	3.25104	3.96999	HepG2	CSTF2T
chr17	156895	156996	-	intron-Distal	5.23017	17.86639	HepG2	CSTF2T
chr17	171213	171270	-	intron-Distal,intron-Proximal	3.27037	6.28777	HepG2	CSTF2T
chr17	140199	140286	-	intron-Distal	3.65089	3.92299	HepG2	CSTF2T
chr17	230573	230665	-	intron-Distal	7.30882	39.54735	HepG2	RBFOX2
chr17	159238	159343	-	intron-Distal	4.51999	15.62045	HepG2	CSTF2T
chr17	131352	131498	-	intron-Distal,intron-Proximal	4.41637	4.42691	HepG2	GTF2F1
chr17	165763	165786	-	intron-Distal	4.55384	5.44349	HepG2	SAFB
chr17	190165	190218	-	intron-Distal	4.38354	4.59164	HepG2	IGF2BP1
chr17	94482	94522	-	intron-Distal	4.78480	9.76145	HepG2	XPO5
chr17	156168	156236	-	intron-Distal	6.09049	19.73569	HepG2	CSTF2T
chr17	94589	94706	-	intron-Distal	4.28984	5.47343	HepG2	YBX3
chr17	164537	164580	-	intron-Distal	3.59964	4.35431	HepG2	PRPF4
chr17	170206	170265	-	intron-Distal	5.00741	4.91906	HepG2	DDX59
chr17	160603	160694	-	intron-Distal	4.01835	9.33519	HepG2	CSTF2T
chr17	230037	230088	-	intron-Distal	4.94888	7.68431	HepG2	CSTF2T
chr17	154957	154983	-	intron-Distal	4.85533	7.84504	HepG2	CSTF2T
chr17	94605	94649	-	intron-Distal	5.19593	34.09567	HepG2	AGGF1
chr17	173558	173619	-	intron-Distal	3.09805	5.44187	HepG2	CSTF2T
chr17	190477	190510	-	intron-Distal	5.75400	9.90837	HepG2	FAM120A
chr17	165416	165485	-	intron-Distal	4.48104	6.17384	HepG2	DDX52
chr17	234471	234494	-	intron-Distal	4.10331	4.19345	HepG2	CSTF2T
chr17	173719	173808	-	intron-Distal	3.83660	10.21237	HepG2	CSTF2T
chr17	156012	156076	-	intron-Distal	4.43425	5.11005	HepG2	PRPF4
chr17	155309	155374	-	intron-Distal	5.67682	12.55897	HepG2	CSTF2T
chr17	230073	230160	-	intron-Distal	7.30204	45.77126	HepG2	RBFOX2
chr17	165424	165482	-	intron-Distal	3.36756	5.12571	HepG2	CSTF2T
chr17	184872	184919	-	intron-Distal	3.39841	3.46580	HepG2	CSTF2T
chr17	230779	230846	-	intron-Distal	4.34001	3.37829	HepG2	DROSHA
chr17	94703	94728	-	intron-Distal	6.52553	21.65642	HepG2	AGGF1
chr17	165122	165154	-	intron-Distal	4.01408	3.16310	HepG2	CSTF2T
chr17	165555	165602	-	intron-Distal	4.25661	4.36329	HepG2	PRPF4
chr17	124166	124244	-	intron-Distal	3.97564	3.42508	HepG2	EIF3D
chr17	99261	99326	-	intron-Distal	4.86675	6.95924	HepG2	HNRNPM
chr17	146947	147031	-	intron-Distal	3.88256	6.26465	HepG2	CSTF2T
chr17	165538	165602	-	intron-Distal	4.04070	9.35150	HepG2	FAM120A
chr17	152968	153023	-	intron-Distal	4.47832	4.92128	HepG2	CSTF2T
chr17	94309	94427	-	intron-Distal	3.80443	4.46307	HepG2	EIF3D
chr17	135766	135813	-	intron-Distal	4.36635	4.68055	HepG2	CSTF2T
chr17	190097	190151	-	intron-Distal	5.86873	33.23940	HepG2	CSTF2T
chr17	70002	70037	-	intron-Distal	4.35089	4.66899	HepG2	HNRNPM
chr17	147514	147561	-	intron-Distal	3.40189	4.14880	HepG2	CSTF2T
chr17	235816	235883	-	intron-Distal	4.58655	5.04056	HepG2	RBFOX2
chr17	87888	87958	-	intron-Distal	5.73753	12.28789	HepG2	PTBP1
chr17	94596	94716	-	intron-Distal	5.91396	12.49787	HepG2	GTF2F1
chr17	95604	95665	-	intron-Distal	5.01766	31.94005	HepG2	AGGF1
chr17	131381	131431	-	intron-Distal	3.37899	4.14880	HepG2	CSTF2T
chr17	147279	147345	-	intron-Distal	4.27728	4.61649	HepG2	CSTF2T
chr17	95353	95435	-	intron-Distal	4.94002	7.86574	HepG2	GTF2F1
chr17	156811	156884	-	intron-Distal	4.24082	16.22192	HepG2	CSTF2T
chr17	164586	164626	-	intron-Distal	3.09169	3.54960	HepG2	ZC3H11A
chr17	189936	189989	-	intron-Distal	4.37695	3.59099	HepG2	FASTKD2
chr17	169630	169705	-	intron-Distal	5.47645	8.19722	HepG2	PCBP2
chr17	234272	234334	-	intron-Distal	3.44664	4.24143	HepG2	RBFOX2
chr17	167361	167465	-	intron-Distal	3.47568	4.35431	HepG2	PRPF4
chr17	234991	235037	-	intron-Distal	4.91670	6.33281	HepG2	FAM120A
chr17	235751	235927	-	intron-Distal	4.52641	20.05231	HepG2	FAM120A
chr17	159504	159558	-	intron-Distal	4.83517	7.68431	HepG2	CSTF2T
chr17	157322	157366	-	intron-Distal	3.77728	6.03429	HepG2	CSTF2T
chr17	184933	184985	-	intron-Distal	3.10883	4.02266	HepG2	CSTF2T
chr17	235353	235397	-	intron-Distal	3.95856	7.34629	HepG2	CSTF2T
chr17	149400	149509	-	intron-Distal	3.49223	3.46580	HepG2	CSTF2T
chr17	235206	235238	-	intron-Distal	4.49908	5.41529	HepG2	CSTF2T
chr17	148022	148072	-	intron-Distal	3.99223	7.58727	HepG2	CSTF2T
chr17	165891	165951	-	intron-Distal	4.48761	3.49180	HepG2	SAFB
chr17	225243	225369	-	intron-Distal	4.85622	6.13079	HepG2	HNRNPK
chr17	134872	134913	-	intron-Distal	3.09805	3.27222	HepG2	CSTF2T
chr17	235557	235616	-	intron-Distal	5.25104	10.46053	HepG2	CSTF2T
chr17	226987	227132	-	intron-Distal	5.39610	20.12669	HepG2	PTBP1
chr17	230410	230467	-	intron-Distal	4.95497	5.44892	HepG2	FAM120A
chr17	164577	164617	-	intron-Distal	3.53304	6.70340	HepG2	DDX52
chr17	206416	206472	-	intron-Distal	6.80582	20.09939	K562	EIF4G2
chr17	165098	165165	-	intron-Distal	5.41012	9.60876	HepG2	FAM120A
chr17	230043	230158	-	intron-Distal	6.50467	15.85396	HepG2	DROSHA
chr17	95329	95395	-	intron-Distal	5.82384	45.05872	HepG2	AGGF1
chr17	165533	165603	-	intron-Distal	3.82102	3.24137	HepG2	EIF3D
chr17	94573	94706	-	intron-Distal	6.23866	16.62195	K562	AGGF1
chr17	235441	235481	-	intron-Distal	4.83565	6.70034	HepG2	CSTF2T
chr17	142379	142423	-	intron-Distal	4.60789	5.11753	HepG2	CSTF2T
chr17	154786	154860	-	intron-Distal	5.18965	9.88754	HepG2	HNRNPK
chr17	140066	140175	-	intron-Distal	3.32383	5.45050	HepG2	CSTF2T
chr17	95497	95604	-	intron-Distal	6.04832	50.03126	HepG2	AGGF1
chr17	131393	131531	-	intron-Distal,intron-Proximal	4.31773	7.70374	HepG2	FAM120A
chr17	235812	235978	-	intron-Distal	3.61054	3.94360	HepG2	GTF2F1
chr17	173356	173394	-	intron-Distal	4.24783	3.87340	HepG2	CSTF2T
chr17	71442	71490	-	intron-Distal	4.73409	6.54632	HepG2	BCCIP
chr17	234978	235058	-	intron-Distal	5.14395	19.79867	HepG2	CSTF2T
chr17	235777	235934	-	intron-Distal	4.72160	6.83853	HepG2	PRPF4
chr17	94602	94654	-	intron-Distal	5.18128	7.04966	HepG2	CDC40
chr17	84325	84436	-	intron-Distal,intron-Proximal	4.20313	3.08079	HepG2	AGGF1
chr17	165520	165598	-	intron-Distal	5.24428	7.95619	HepG2	DDX52
chr17	183999	184041	-	intron-Distal	4.22159	4.36133	HepG2	CSTF2T
chr17	94481	94530	-	intron-Distal	5.80164	10.68901	HepG2	HNRNPL
chr17	235751	235803	-	intron-Distal	3.97754	7.82628	HepG2	CSTF2T
chr17	235548	235618	-	intron-Distal	4.87342	10.86886	HepG2	FAM120A
chr17	155404	155531	-	intron-Distal	4.81590	7.92803	HepG2	DROSHA
chr17	167216	167331	-	intron-Distal	4.03579	4.76457	HepG2	EIF3D
chr17	164526	164577	-	intron-Distal	3.90988	11.24372	HepG2	DDX52
chr17	165272	165324	-	intron-Distal	3.48508	4.76643	HepG2	DDX52
chr17	235109	235150	-	intron-Distal	4.74231	5.44892	HepG2	FAM120A
chr17	142423	142463	-	intron-Distal	3.56976	3.92299	HepG2	CSTF2T
chr17	95277	95329	-	intron-Distal	5.39247	21.27646	HepG2	AGGF1
chr17	231283	231339	-	intron-Distal	6.30222	22.29640	HepG2	RBFOX2
chr17	234882	234931	-	intron-Distal	4.12145	8.66215	HepG2	CSTF2T
chr17	165424	165482	-	intron-Distal	3.84158	6.24931	HepG2	PRPF4
chr17	235078	235159	-	intron-Distal	5.55149	13.55344	HepG2	CSTF2T
chr17	231226	231249	-	intron-Distal	4.41670	4.57154	HepG2	FAM120A
chr17	184708	184741	-	intron-Distal	4.07387	4.10564	HepG2	CSTF2T
chr17	156520	156581	-	intron-Distal,intron-Proximal	3.51695	4.20198	HepG2	FAM120A
chr17	155417	155534	-	intron-Distal	6.16311	14.52816	HepG2	DDX59
chr17	165413	165483	-	intron-Distal	4.97561	5.79727	HepG2	ZC3H11A
chr17	166901	166983	-	intron-Distal	4.51937	3.68544	HepG2	EIF3D
chr17	71440	71493	-	intron-Distal	5.44997	9.32107	HepG2	HNRNPM
chr17	229799	229863	-	intron-Distal	6.00679	16.63497	HepG2	RBFOX2
chr17	206418	206471	-	intron-Distal	4.47632	3.89080	K562	EXOSC5
chr17	70140	70191	-	intron-Distal	4.08503	8.04011	HepG2	BCCIP
chr17	229785	229871	-	intron-Distal	4.22036	13.38731	HepG2	CSTF2T
chr17	134432	134528	-	intron-Distal	4.70811	4.36133	HepG2	CSTF2T
chr17	164357	164435	-	intron-Distal	4.57134	4.59785	HepG2	SAFB
chr17	88080	88132	-	intron-Distal	3.29403	3.59803	HepG2	PTBP1
chr17	142917	142964	-	intron-Distal	4.00511	3.63902	HepG2	CSTF2T
chr17	156274	156308	-	intron-Distal	4.03456	6.99039	HepG2	CSTF2T
chr17	71835	71895	-	intron-Distal	4.46138	5.83408	HepG2	BCCIP
chr17	94469	94525	-	intron-Distal	4.28746	4.73157	HepG2	EIF3D
chr17	131446	131489	-	intron-Distal,intron-Proximal	3.13663	3.69530	HepG2	CSTF2T
chr17	159187	159238	-	intron-Distal	4.71825	5.93727	HepG2	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RPH3AL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RPH3AL is not available on ENCORE database.
55 RBPs can affect the levels of RPH3AL.

The Knockdown/knockout RNA-Seq assay for RPH3AL is not available on ENCORE database.

55 RBPs can affect the gene expression of RPH3AL :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RPH3AL	ENSG00000181031.11	599.87590	450.04290	0.41450	3.43280	2.68310	HepG2	AUH
RPH3AL	ENSG00000181031.11	243.04680	415.02900	-0.77200	2.00070	1.33590	HepG2	CIRBP
RPH3AL	ENSG00000181031.11	235.57340	342.86470	-0.54150	4.00380	3.23180	HepG2	CKAP4
RPH3AL	ENSG00000181031.11	301.08220	205.55560	0.55050	2.64570	1.97150	HepG2	CPSF6
RPH3AL	ENSG00000181031.11	499.41690	311.77090	0.67970	4.86260	3.41980	HepG2	CPSF7
RPH3AL	ENSG00000181031.11	338.51120	256.14170	0.40220	2.22390	1.63690	HepG2	CELF1
RPH3AL	ENSG00000181031.11	378.02680	275.42620	0.45670	3.12700	2.34630	HepG2	DAZAP1
RPH3AL	ENSG00000181031.11	244.44640	317.19890	-0.37590	2.27830	1.51630	HepG2	DDX19B
RPH3AL	ENSG00000181031.11	115.82060	204.49550	-0.82020	4.07600	3.26730	HepG2	DDX21
RPH3AL	ENSG00000181031.11	116.06050	200.20160	-0.78660	3.79200	2.71040	HepG2	DDX24
RPH3AL	ENSG00000181031.11	677.95000	434.66560	0.64120	2.85070	2.22430	HepG2	DDX6
RPH3AL	ENSG00000181031.11	168.83980	328.14370	-0.95870	8.60690	7.54420	HepG2	DKC1
RPH3AL	ENSG00000181031.11	305.60200	181.65830	0.75030	5.59560	4.62510	HepG2	DNAJC21
RPH3AL	ENSG00000181031.11	243.18970	180.05470	0.43350	2.30100	1.69420	HepG2	DNAJC2
RPH3AL	ENSG00000181031.11	164.51750	244.61310	-0.57230	2.39660	1.53560	HepG2	EEF2
RPH3AL	ENSG00000181031.11	609.44380	417.56780	0.54540	2.29730	1.75330	HepG2	EIF2S1
RPH3AL	ENSG00000181031.11	124.38630	193.17100	-0.63510	2.78100	1.69570	HepG2	EIF3G
RPH3AL	ENSG00000181031.11	273.36640	461.32270	-0.75490	1.98860	1.44380	HepG2	EIF4A3
RPH3AL	ENSG00000181031.11	214.69630	328.04120	-0.61160	2.65720	1.58560	HepG2	ESF1
RPH3AL	ENSG00000181031.11	242.62030	335.11850	-0.46600	2.48820	1.69540	HepG2	EWSR1
RPH3AL	ENSG00000181031.11	236.38110	465.87510	-0.97880	2.63240	1.95740	HepG2	FXR1
RPH3AL	ENSG00000181031.11	125.26060	183.39860	-0.55010	1.85560	1.31420	HepG2	HNRNPA1
RPH3AL	ENSG00000181031.11	349.14300	241.74950	0.53020	3.33890	2.55700	HepG2	HNRNPF
RPH3AL	ENSG00000181031.11	304.95910	202.64850	0.58950	4.04370	3.32170	HepG2	HNRNPU
RPH3AL	ENSG00000181031.11	324.71820	516.01760	-0.66820	4.22530	2.70130	HepG2	HSPD1
RPH3AL	ENSG00000181031.11	204.29170	412.28560	-1.01300	2.22930	1.35450	HepG2	IGF2BP3
RPH3AL	ENSG00000181031.11	278.19310	468.57970	-0.75220	1.93220	1.40010	HepG2	MATR3
RPH3AL	ENSG00000181031.11	254.21160	479.56190	-0.91570	2.31020	1.72930	HepG2	NCBP2
RPH3AL	ENSG00000181031.11	366.93790	273.11140	0.42590	2.43130	1.71870	HepG2	NOL12
RPH3AL	ENSG00000181031.11	253.13460	449.23790	-0.82760	5.95230	5.11560	HepG2	PCBP1
RPH3AL	ENSG00000181031.11	195.28030	266.22600	-0.44710	2.35220	1.63210	HepG2	PRPF4
RPH3AL	ENSG00000181031.11	389.95500	276.74710	0.49460	3.76580	3.09710	HepG2	PUM1
RPH3AL	ENSG00000181031.11	515.88350	357.24780	0.53000	4.36950	3.32260	HepG2	RBM15
RPH3AL	ENSG00000181031.11	286.00880	449.29970	-0.65160	3.42750	2.68340	HepG2	RBM25
RPH3AL	ENSG00000181031.11	291.84290	508.73930	-0.80170	6.79220	6.00960	HepG2	NELFE
RPH3AL	ENSG00000181031.11	289.18190	473.88940	-0.71260	5.45820	4.62910	HepG2	RECQL
RPH3AL	ENSG00000181031.11	381.67210	180.46740	1.08050	12.94520	11.70290	HepG2	SAFB2
RPH3AL	ENSG00000181031.11	177.84100	307.20910	-0.78860	4.00880	3.19140	HepG2	SF3A3
RPH3AL	ENSG00000181031.11	277.24640	475.88320	-0.77940	6.31810	5.48540	HepG2	SF3B4
RPH3AL	ENSG00000181031.11	371.02560	216.74820	0.77540	3.26100	2.21160	HepG2	SMNDC1
RPH3AL	ENSG00000181031.11	253.16320	103.35150	1.29240	3.93470	2.30790	HepG2	SNRNP200
RPH3AL	ENSG00000181031.11	184.36690	496.75200	-1.42990	15.27050	14.35120	HepG2	SRSF1
RPH3AL	ENSG00000181031.11	354.24420	257.40470	0.46060	2.86410	2.22740	HepG2	SRSF5
RPH3AL	ENSG00000181031.11	380.37670	237.52260	0.67930	5.49580	4.57140	HepG2	SRSF7
RPH3AL	ENSG00000181031.11	212.71150	423.51000	-0.99350	11.91340	10.99480	HepG2	SSB
RPH3AL	ENSG00000181031.11	370.16590	514.25530	-0.47430	2.69520	1.42990	HepG2	SSRP1
RPH3AL	ENSG00000181031.11	434.50270	292.74370	0.56960	4.89140	4.10540	HepG2	SUCLG1
RPH3AL	ENSG00000181031.11	198.93200	446.59160	-1.16670	10.44890	9.47110	HepG2	TAF15
RPH3AL	ENSG00000181031.11	328.69470	505.11080	-0.61990	2.32400	1.34520	HepG2	TBRG4
RPH3AL	ENSG00000181031.11	236.92570	122.77350	0.94830	2.23890	1.33360	HepG2	TFIP11
RPH3AL	ENSG00000181031.11	268.87730	198.67120	0.43650	2.36180	1.83230	HepG2	TRIM56
RPH3AL	ENSG00000181031.11	173.02440	327.09280	-0.91870	2.89250	2.25090	HepG2	U2AF1
RPH3AL	ENSG00000181031.11	140.46080	263.03670	-0.90510	6.17750	5.34200	HepG2	UTP3
RPH3AL	ENSG00000181031.11	190.90550	262.74510	-0.46080	2.47220	1.83210	HepG2	ZC3H8
RPH3AL	ENSG00000181031.11	425.65340	299.63970	0.50640	4.33780	3.69380	HepG2	ZNF622
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RPH3AL is not available on ENCORE database.

2 RBPs can affect the splicing of RPH3AL :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	RPH3AL	ENSG00000181031.11	chr17	-	131558	131645			96901	97076	169210	169340	0.34700	0.00444	0.06888	included	HepG2	U2AF1
SE	RPH3AL	ENSG00000181031.11	chr17	-	183549	183725			177257	177370	202502	202888	-0.46400	0.00101	0.08129	excluded	HepG2	SRSF7

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RPH3AL

General Information

Functions

Localization

Domains (AlphaFold: RPH3AL)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RPH3AL is not avaliable on ENCORE database.

36 proteins are bound to RPH3AL RNA:

eCLIP assay for RPH3AL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RPH3AL is not available on ENCORE database.

55 RBPs can affect the gene expression of RPH3AL :

The Knockdown/knockout RNA-Seq assay for RPH3AL is not available on ENCORE database.

2 RBPs can affect the splicing of RPH3AL :

The Knockdown/knockout RNA-Seq assay for RPH3AL is not avaliable on ENCORE database.