RP11-473M20.7

General Information

Gene Name : RP11-473M20.7
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-473M20.7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-473M20.7 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-473M20.7 RNA is bound by 8 proteins.

eCLIP assay for RP11-473M20.7 is not avaliable on ENCORE database.

8 proteins are bound to RP11-473M20.7 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	3104557	3104632	-	intron-Distal	6.74151	86.61892	K562	DDX6
chr16	3104113	3104306	-	intron-Distal	5.59630	13.61528	HepG2	PCBP1
chr16	3104201	3104225	-	intron-Distal	7.72199	112.36341	K562	RBFOX2
chr16	3104131	3104162	-	intron-Distal	7.07650	109.75152	K562	RBFOX2
chr16	3104135	3104167	-	intron-Distal	8.71530	400.00000	K562	DROSHA
chr16	3104556	3104647	-	intron-Distal	6.16130	70.15626	K562	RBFOX2
chr16	3104225	3104322	-	intron-Distal	9.49514	400.00000	K562	DROSHA
chr16	3104195	3104321	-	intron-Distal	8.81264	234.30409	K562	DDX6
chr16	3103950	3104011	-	intron-Distal	5.05763	7.79030	HepG2	PCBP2
chr16	3108086	3108156	-	intron-Distal	4.20027	4.16830	K562	EWSR1
chr16	3108546	3108615	-	intron-Distal,intron-Proximal	3.22382	3.92299	HepG2	CSTF2T
chr16	3104348	3104396	-	intron-Distal	9.57567	225.18587	K562	DROSHA
chr16	3104135	3104176	-	intron-Distal	8.26267	175.12522	HepG2	DROSHA
chr16	3104575	3104622	-	intron-Distal	4.06552	6.34161	K562	PCBP1
chr16	3104549	3104630	-	intron-Distal	7.82515	122.22363	HepG2	RBFOX2
chr16	3104084	3104170	-	intron-Distal	6.44788	40.80134	HepG2	DDX6
chr16	3104052	3104135	-	intron-Distal	9.49593	216.31850	HepG2	DROSHA
chr16	3104222	3104272	-	intron-Distal	8.41136	198.22917	HepG2	RBFOX2
chr16	3104113	3104133	-	intron-Distal	4.62794	4.53890	K562	PCBP1
chr16	3104064	3104165	-	intron-Distal	9.80242	171.61482	K562	DDX6
chr16	3104165	3104195	-	intron-Distal	8.15059	101.95289	K562	DDX6
chr16	3104162	3104201	-	intron-Distal	7.76006	116.49912	K562	RBFOX2
chr16	3104127	3104159	-	intron-Distal	7.56368	82.71894	HepG2	RBFOX2
chr16	3104359	3104399	-	intron-Distal	6.71359	13.11717	HepG2	DDX6
chr16	3104277	3104328	-	intron-Distal	7.46935	100.22743	K562	RBFOX2
chr16	3107463	3107484	-	intron-Distal	5.38276	9.95364	K562	RBFOX2
chr16	3104356	3104391	-	intron-Distal	7.58461	32.84336	K562	DDX6
chr16	3104058	3104100	-	intron-Distal	8.03203	71.46579	K562	RBFOX2
chr16	3104783	3104793	-	intron-Distal	7.52797	48.29459	HepG2	RBFOX2
chr16	3104225	3104278	-	intron-Distal	9.31613	169.73636	HepG2	DROSHA
chr16	3104555	3104643	-	intron-Distal	6.89001	86.30745	HepG2	DROSHA
chr16	3108874	3108951	-	intron-Distal	3.35451	3.73797	K562	CSTF2T
chr16	3104225	3104277	-	intron-Distal	9.17014	155.13152	K562	RBFOX2
chr16	3104557	3104642	-	intron-Distal	8.53270	400.00000	K562	DROSHA
chr16	3104176	3104225	-	intron-Distal	8.23411	169.43684	HepG2	DROSHA
chr16	3104345	3104389	-	intron-Distal	7.25993	39.79670	K562	RBFOX2
chr16	3104200	3104224	-	intron-Distal	9.04291	400.00000	K562	DROSHA
chr16	3104359	3104396	-	intron-Distal	6.95157	32.78419	HepG2	DROSHA
chr16	3104171	3104200	-	intron-Distal	8.46137	400.00000	K562	DROSHA
chr16	3104163	3104219	-	intron-Distal	9.04220	127.11509	HepG2	RBFOX2
chr16	3104278	3104318	-	intron-Distal	8.51304	85.31950	HepG2	DROSHA
chr16	3104170	3104246	-	intron-Distal	7.00473	42.73076	HepG2	DDX6
chr16	3104246	3104321	-	intron-Distal	8.29722	45.34382	HepG2	DDX6
chr16	3104066	3104127	-	intron-Distal	7.70096	95.34066	HepG2	RBFOX2
chr16	3104168	3104326	-	intron-Distal	7.61349	33.60581	K562	PCBP1
chr16	3107447	3107533	-	intron-Distal	4.66181	6.09301	K562	CSTF2T
chr16	3104793	3104828	-	intron-Distal,intron-Proximal	7.74063	54.75899	HepG2	RBFOX2
chr16	3104100	3104131	-	intron-Distal	6.95884	99.46957	K562	RBFOX2
chr16	3104272	3104327	-	intron-Distal	6.94803	400.00000	HepG2	RBFOX2
chr16	3104111	3104291	-	intron-Distal	3.28286	7.83746	K562	HNRNPK
chr16	3104571	3104624	-	intron-Distal	7.49272	25.06446	HepG2	DDX6
chr16	3104064	3104135	-	intron-Distal	9.77088	400.00000	K562	DROSHA
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-473M20.7 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-473M20.7 is not available on ENCORE database.
81 RBPs can affect the levels of RP11-473M20.7.

The Knockdown/knockout RNA-Seq assay for RP11-473M20.7 is not available on ENCORE database.

81 RBPs can affect the gene expression of RP11-473M20.7 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-473M20.7	ENSG00000261971.2	241.25490	123.32630	0.96800	5.25420	3.83470	HepG2	AKAP8
RP11-473M20.7	ENSG00000261971.2	253.61620	177.23840	0.51690	1.95320	1.44270	HepG2	BOP1
RP11-473M20.7	ENSG00000261971.2	153.38330	93.84430	0.70870	2.64970	1.44720	HepG2	BUD13
RP11-473M20.7	ENSG00000261971.2	228.39060	94.49510	1.27310	6.64420	5.11620	HepG2	CCAR1
RP11-473M20.7	ENSG00000261971.2	328.74550	162.72600	1.01440	7.55840	6.46770	HepG2	CPSF6
RP11-473M20.7	ENSG00000261971.2	65.04750	32.19460	1.01460	2.29590	1.67080	HepG2	DDX21
RP11-473M20.7	ENSG00000261971.2	13.08930	34.17360	-1.38450	1.93570	1.40350	HepG2	DDX3X
RP11-473M20.7	ENSG00000261971.2	64.66720	29.35240	1.13950	2.41340	1.83270	HepG2	DDX6
RP11-473M20.7	ENSG00000261971.2	73.23420	33.22620	1.14010	3.30850	2.54410	HepG2	DNAJC21
RP11-473M20.7	ENSG00000261971.2	58.61870	32.93080	0.83180	1.91910	1.35770	HepG2	DNAJC2
RP11-473M20.7	ENSG00000261971.2	69.16000	28.22060	1.29310	3.15740	2.52570	HepG2	EIF2S1
RP11-473M20.7	ENSG00000261971.2	116.65770	31.18880	1.90310	8.60740	7.48250	HepG2	EIF4A3
RP11-473M20.7	ENSG00000261971.2	69.58300	30.36350	1.19630	2.52270	1.86460	HepG2	EIF4B
RP11-473M20.7	ENSG00000261971.2	139.08240	70.18060	0.98670	4.32920	3.60620	HepG2	ETF1
RP11-473M20.7	ENSG00000261971.2	126.43970	29.18930	2.11480	11.06470	9.77760	HepG2	G3BP1
RP11-473M20.7	ENSG00000261971.2	58.33030	27.00780	1.11080	2.40460	1.57560	HepG2	GEMIN5
RP11-473M20.7	ENSG00000261971.2	312.18730	184.49390	0.75870	4.20420	3.42630	HepG2	GPKOW
RP11-473M20.7	ENSG00000261971.2	78.07620	33.54450	1.21870	3.30780	2.60960	HepG2	HNRNPA1
RP11-473M20.7	ENSG00000261971.2	150.14040	91.61390	0.71260	2.00380	1.38670	HepG2	HNRNPF
RP11-473M20.7	ENSG00000261971.2	142.79690	87.26470	0.71040	2.51380	1.60490	HepG2	HNRNPM
RP11-473M20.7	ENSG00000261971.2	69.78070	37.06470	0.91270	1.90430	1.39240	HepG2	HNRNPU
RP11-473M20.7	ENSG00000261971.2	244.21040	134.19880	0.86370	2.65490	1.45450	HepG2	HSPD1
RP11-473M20.7	ENSG00000261971.2	74.37880	29.67120	1.32570	3.56000	2.80340	HepG2	IGF2BP2
RP11-473M20.7	ENSG00000261971.2	83.10930	37.86050	1.13420	4.17700	3.29460	HepG2	ILF2
RP11-473M20.7	ENSG00000261971.2	71.50270	29.84240	1.26050	2.94110	1.90280	HepG2	KHSRP
RP11-473M20.7	ENSG00000261971.2	189.09900	99.95310	0.91970	2.78270	1.94980	HepG2	LARP4
RP11-473M20.7	ENSG00000261971.2	81.65930	31.47410	1.37540	3.32520	2.60580	HepG2	MAGOH
RP11-473M20.7	ENSG00000261971.2	180.56550	102.35930	0.81880	3.50150	2.59270	HepG2	MSI2
RP11-473M20.7	ENSG00000261971.2	93.37140	44.37090	1.07330	2.92790	2.14320	HepG2	NOL12
RP11-473M20.7	ENSG00000261971.2	169.82850	63.70330	1.41450	3.54680	1.47860	HepG2	NUFIP2
RP11-473M20.7	ENSG00000261971.2	72.09030	28.85500	1.32090	3.61550	2.79740	HepG2	PABPC4
RP11-473M20.7	ENSG00000261971.2	83.07260	35.26000	1.23620	3.98300	3.35300	HepG2	PTBP1
RP11-473M20.7	ENSG00000261971.2	80.17650	38.17770	1.07040	2.95030	2.30880	HepG2	QKI
RP11-473M20.7	ENSG00000261971.2	9.46610	45.79660	-2.27440	4.04460	3.20020	HepG2	RAVER1
RP11-473M20.7	ENSG00000261971.2	286.83140	56.38770	2.34670	9.57630	6.55520	HepG2	RBM39
RP11-473M20.7	ENSG00000261971.2	142.80770	39.23720	1.86370	10.42840	9.50130	HepG2	NELFE
RP11-473M20.7	ENSG00000261971.2	81.75040	36.55100	1.16120	3.48060	2.79910	HepG2	RECQL
RP11-473M20.7	ENSG00000261971.2	180.01570	98.75440	0.86610	1.98910	1.39880	HepG2	RPLP0
RP11-473M20.7	ENSG00000261971.2	97.32420	29.51530	1.72120	6.60170	5.69770	HepG2	RPS19
RP11-473M20.7	ENSG00000261971.2	78.80470	42.15300	0.90250	2.16300	1.45560	HepG2	RPS3A
RP11-473M20.7	ENSG00000261971.2	245.59740	62.01870	1.98540	4.07500	2.35280	HepG2	SF1
RP11-473M20.7	ENSG00000261971.2	47.83410	127.28600	-1.41200	5.44110	4.47630	HepG2	SF3A3
RP11-473M20.7	ENSG00000261971.2	103.51200	36.70200	1.49580	6.07860	5.26000	HepG2	SF3B4
RP11-473M20.7	ENSG00000261971.2	70.32800	38.49370	0.86940	2.18000	1.59840	HepG2	SMN1
RP11-473M20.7	ENSG00000261971.2	154.77780	55.31770	1.48430	4.18840	2.49920	HepG2	SNRNP200
RP11-473M20.7	ENSG00000261971.2	66.80720	31.17200	1.09970	3.09800	2.52030	HepG2	SRSF9
RP11-473M20.7	ENSG00000261971.2	197.08700	84.47440	1.22210	6.04920	4.30430	HepG2	STAU1
RP11-473M20.7	ENSG00000261971.2	140.29860	42.11740	1.73590	6.82700	5.83950	HepG2	SUPV3L1
RP11-473M20.7	ENSG00000261971.2	123.70750	36.01770	1.78010	5.36880	4.71870	HepG2	TIAL1
RP11-473M20.7	ENSG00000261971.2	60.63180	108.19740	-0.83550	2.41330	1.82320	HepG2	U2AF1
RP11-473M20.7	ENSG00000261971.2	166.03830	80.47810	1.04470	6.12250	5.18510	HepG2	ZC3H8
RP11-473M20.7	ENSG00000261971.2	116.50130	206.34670	-0.82470	4.58490	3.88650	K562	AGGF1
RP11-473M20.7	ENSG00000261971.2	116.57180	214.70560	-0.88110	4.99860	4.10920	K562	AKAP8L
RP11-473M20.7	ENSG00000261971.2	229.03680	92.29970	1.31110	9.73890	7.41890	K562	CCAR1
RP11-473M20.7	ENSG00000261971.2	480.24360	307.58360	0.64270	5.02470	3.97230	K562	CPSF6
RP11-473M20.7	ENSG00000261971.2	276.13710	199.29220	0.47040	2.18790	1.59750	K562	DDX47
RP11-473M20.7	ENSG00000261971.2	204.36940	103.34260	0.98360	5.56000	3.54840	K562	DHX30
RP11-473M20.7	ENSG00000261971.2	152.07490	231.08570	-0.60360	3.36500	2.38660	K562	DKC1
RP11-473M20.7	ENSG00000261971.2	176.31240	93.87940	0.90920	2.77140	1.76670	K562	EIF3A
RP11-473M20.7	ENSG00000261971.2	135.34880	65.70030	1.04260	4.14320	2.72310	K562	FKBP4
RP11-473M20.7	ENSG00000261971.2	211.31880	114.07280	0.88940	4.03650	3.12590	K562	GRSF1
RP11-473M20.7	ENSG00000261971.2	136.44280	84.11990	0.69770	2.67020	1.61710	K562	HNRNPA1
RP11-473M20.7	ENSG00000261971.2	357.60800	216.41630	0.72450	3.26080	1.53640	K562	HNRNPAB
RP11-473M20.7	ENSG00000261971.2	336.03250	75.59330	2.15220	25.09800	23.37160	K562	HNRNPC
RP11-473M20.7	ENSG00000261971.2	145.70420	67.52530	1.10940	4.92450	3.34320	K562	HNRNPF
RP11-473M20.7	ENSG00000261971.2	213.15750	93.16640	1.19390	8.68090	7.11030	K562	HNRNPU
RP11-473M20.7	ENSG00000261971.2	388.00110	211.18520	0.87750	4.26580	2.48390	K562	ILF2
RP11-473M20.7	ENSG00000261971.2	127.84230	227.88260	-0.83390	4.44750	3.36620	K562	KIF1C
RP11-473M20.7	ENSG00000261971.2	95.70460	52.31420	0.87130	2.80280	1.87390	K562	MATR3
RP11-473M20.7	ENSG00000261971.2	267.47110	162.16970	0.72180	4.45190	3.44680	K562	MTPAP
RP11-473M20.7	ENSG00000261971.2	103.74780	178.93220	-0.78630	2.82610	1.93300	K562	NAA15
RP11-473M20.7	ENSG00000261971.2	242.93370	180.18770	0.43100	1.99020	1.34480	K562	NSUN2
RP11-473M20.7	ENSG00000261971.2	399.72490	166.31610	1.26500	11.24510	9.57250	K562	PCBP3
RP11-473M20.7	ENSG00000261971.2	154.47510	73.81820	1.06520	4.78250	2.83800	K562	PHF6
RP11-473M20.7	ENSG00000261971.2	416.32300	205.76940	1.01660	6.49410	3.70990	K562	PPIL4
RP11-473M20.7	ENSG00000261971.2	17.84070	61.19400	-1.77820	4.29770	3.36330	K562	PRPF8
RP11-473M20.7	ENSG00000261971.2	150.60520	67.78300	1.15170	3.70090	2.63430	K562	PSIP1
RP11-473M20.7	ENSG00000261971.2	105.55430	212.98280	-1.01280	5.12790	4.41700	K562	PUS1
RP11-473M20.7	ENSG00000261971.2	123.45520	207.47510	-0.74900	3.94830	3.25540	K562	RBM15
RP11-473M20.7	ENSG00000261971.2	88.37110	48.85730	0.85490	2.57210	1.76390	K562	RBM22
RP11-473M20.7	ENSG00000261971.2	336.40780	168.34660	0.99870	3.63880	1.81270	K562	RBM39
RP11-473M20.7	ENSG00000261971.2	207.57390	113.67210	0.86860	4.48730	3.09990	K562	SAFB
RP11-473M20.7	ENSG00000261971.2	118.65340	58.64870	1.01650	3.09240	1.99390	K562	SRFBP1
RP11-473M20.7	ENSG00000261971.2	18.99150	49.90660	-1.39390	2.89980	2.17890	K562	SRSF1
RP11-473M20.7	ENSG00000261971.2	160.21070	98.85080	0.69650	2.42220	1.44700	K562	SRSF4
RP11-473M20.7	ENSG00000261971.2	84.43670	50.52450	0.74080	1.93040	1.33260	K562	TARDBP
RP11-473M20.7	ENSG00000261971.2	243.38060	65.19260	1.90030	15.77080	13.39570	K562	TIAL1
RP11-473M20.7	ENSG00000261971.2	129.90720	69.28920	0.90670	3.32190	2.26620	K562	TRIM56
RP11-473M20.7	ENSG00000261971.2	346.35640	191.05660	0.85820	7.60580	6.48770	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-473M20.7

General Information

Functions

Localization

Domains (AlphaFold: RP11-473M20.7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-473M20.7 is not avaliable on ENCORE database.

8 proteins are bound to RP11-473M20.7 RNA:

eCLIP assay for RP11-473M20.7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-473M20.7 is not available on ENCORE database.

81 RBPs can affect the gene expression of RP11-473M20.7 :

The Knockdown/knockout RNA-Seq assay for RP11-473M20.7 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-473M20.7 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-473M20.7 is not avaliable on ENCORE database.