RAB2A

General Information

Gene Name : RAB2A
Gene ID : ENSG00000104388.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RAB2A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RAB2A	ENSG00000104388.14	74.02	66.18	70.10	ENCSR000AEF
HepG2	RAB2A	ENSG00000104388.14	45.85	67.22	56.53	ENCSR985KAT
K562	RAB2A	ENSG00000104388.14	45.25	66.44	55.84	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RAB2A is not avaliable on ENCORE database.

Proteins bound to RNA

RAB2A RNA is bound by 18 proteins.

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eCLIP assay for RAB2A is not avaliable on ENCORE database.

18 proteins are bound to RAB2A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	61429524	61429694	+	5'-UTR	4.49227	29.03261	HepG2	DDX3X
chr8	61429538	61429635	+	5'-UTR	3.74709	12.41221	K562	DDX3X
chr8	61476284	61476398	+	intron-Distal	4.69158	11.85119	HepG2	QKI
chr8	61533365	61533427	+	3'-UTR	3.28381	11.28046	K562	IGF2BP2
chr8	61429671	61429782	+	5'-UTR,CDS	3.67690	8.86967	K562	GEMIN5
chr8	61431234	61431369	+	intron-Distal	4.99266	8.61835	K562	TARDBP
chr8	61534315	61534378	+	3'-UTR	3.60281	8.47986	K562	PUM2
chr8	61533500	61533623	+	3'-UTR	5.66980	8.26964	HepG2	FUBP3
chr8	61429543	61429655	+	5'-UTR	3.32604	7.96348	HepG2	NCBP2
chr8	61533344	61533365	+	3'-UTR	4.00006	7.51369	K562	IGF2BP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 36 entries

eCLIP assay for RAB2A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RAB2A is not available on ENCORE database.
75 RBPs can affect the levels of RAB2A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RAB2A is not available on ENCORE database.

75 RBPs can affect the gene expression of RAB2A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RAB2A	ENSG00000104388.10	1892.56380	1269.23900	0.57630	15.70190	14.66590	HepG2	ZNF622
RAB2A	ENSG00000104388.10	683.59130	1432.73690	-1.06760	16.09910	14.63600	HepG2	IGF2BP2
RAB2A	ENSG00000104388.10	581.30490	962.93040	-0.72810	15.08850	13.68790	HepG2	DNAJC2
RAB2A	ENSG00000104388.10	848.69680	1359.72170	-0.68000	15.32870	13.37890	K562	SRPK2
RAB2A	ENSG00000104388.10	2339.69010	1331.50690	0.81320	13.08350	11.94860	K562	PUS1
RAB2A	ENSG00000104388.10	611.42360	1053.18270	-0.78450	12.51600	11.58470	HepG2	TIAL1
RAB2A	ENSG00000104388.10	899.54110	1419.35060	-0.65800	11.44130	10.54070	HepG2	RBM22
RAB2A	ENSG00000104388.10	707.17240	1083.80520	-0.61600	10.64660	9.52190	HepG2	HNRNPU
RAB2A	ENSG00000104388.10	944.60100	1345.00380	-0.50980	10.34690	9.02950	K562	NSUN2
RAB2A	ENSG00000104388.10	1891.09980	1297.45110	0.54340	9.30310	8.23870	K562	RBM15
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 88 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RAB2A is not available on ENCORE database.

4 RBPs can affect the splicing of RAB2A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RAB2A	ENSG00000104388.10	chr8	+	61484604	61484672			61471410	61471482	61496766	61496849	-0.08100	0.00000	0.00000	excluded	K562	AQR
SE	RAB2A	ENSG00000104388.10	chr8	+	61504416	61504528			61497281	61497374	61531138	61531207	-0.06300	0.00000	0.00001	excluded	K562	AQR
SE	RAB2A	ENSG00000104388.10	chr8	+	61504416	61504528			61497281	61497374	61531138	61531207	-0.07900	0.00000	0.00000	excluded	K562	PUS1
MXE	RAB2A	ENSG00000104388.10	chr8	+	61497256	61497374	61504416	61504528	61496766	61496849	61531138	61531207	0.07500	0.00000	0.00000	1included	K562	AQR
MXE	RAB2A	ENSG00000104388.10	chr8	+	61497256	61497374	61504387	61504528	61496766	61496849	61531138	61531207	0.07400	0.00000	0.00000	1included	K562	AQR
MXE	RAB2A	ENSG00000104388.10	chr8	+	61497178	61497374	61504416	61504528	61496766	61496849	61531138	61531207	0.06800	0.00000	0.00000	1included	K562	AQR
MXE	RAB2A	ENSG00000104388.10	chr8	+	61497178	61497374	61504387	61504528	61496766	61496849	61531138	61531207	0.06700	0.00000	0.00000	1included	K562	AQR
MXE	RAB2A	ENSG00000104388.10	chr8	+	61496766	61496849	61531138	61531207	61471410	61471482	61533232	61533454	0.09200	0.00000	0.00000	1included	K562	AQR
SE	RAB2A	ENSG00000104388.10	chr8	+	61482301	61482429			61471410	61471482	61484604	61484672	0.06500	0.00001	0.00021	included	K562	HNRNPC
SE	RAB2A	ENSG00000104388.10	chr8	+	61504416	61504528			61497281	61497374	61531138	61531207	-0.06800	0.00021	0.00634	excluded	K562	U2AF1

Showing 1 to 10 of 12 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RAB2A

General Information

Functions

Localization

Domains (AlphaFold: RAB2A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RAB2A is not avaliable on ENCORE database.

18 proteins are bound to RAB2A RNA:

eCLIP assay for RAB2A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RAB2A is not available on ENCORE database.

75 RBPs can affect the gene expression of RAB2A :

The Knockdown/knockout RNA-Seq assay for RAB2A is not available on ENCORE database.

4 RBPs can affect the splicing of RAB2A :

The Knockdown/knockout RNA-Seq assay for RAB2A is not avaliable on ENCORE database.