PINK1-AS

General Information

Gene Name : PINK1-AS
Gene ID : ENSG00000117242.7
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PINK1-AS)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PINK1-AS	ENSG00000117242.7	2.27	2.64	2.46	ENCSR000AEF
HepG2	PINK1-AS	ENSG00000117242.7	4.29	3.78	4.04	ENCSR985KAT
K562	PINK1-AS	ENSG00000117242.7	1.59	1.41	1.50	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PINK1-AS is not avaliable on ENCORE database.

Proteins bound to RNA

PINK1-AS RNA is bound by 16 proteins.

eCLIP assay for PINK1-AS is not avaliable on ENCORE database.

16 proteins are bound to PINK1-AS RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	20978720	20978811	-	3'-UTR,intron-Distal,intron-Proximal	4.24745	82.23635	K562	PABPC4
chr1	20978632	20978684	-	3'-UTR,intron-Distal	4.87602	19.08888	HepG2	DDX55
chr1	20978728	20978815	-	3'-UTR,intron-Distal,intron-Proximal	4.17107	8.86909	HepG2	TIAL1
chr1	20978708	20978787	-	3'-UTR,intron-Distal,intron-Proximal	3.81385	20.27114	HepG2	LIN28B
chr1	20978762	20978780	-	3'-UTR,intron-Distal,intron-Proximal	5.26249	79.33845	HepG2	LARP4
chr1	20978631	20978660	-	3'-UTR,intron-Distal	5.87080	10.47340	HepG2	SUB1
chr1	20978713	20978763	-	3'-UTR,intron-Distal,intron-Proximal	3.80615	37.02840	HepG2	DDX55
chr1	20978712	20978735	-	3'-UTR,intron-Distal,intron-Proximal	4.02170	3.60623	K562	APOBEC3C
chr1	20978748	20978778	-	3'-UTR,intron-Distal,intron-Proximal	5.84549	41.87247	HepG2	SUB1
chr1	20978735	20978794	-	3'-UTR,intron-Distal,intron-Proximal	3.94528	7.49561	K562	CPEB4
chr1	20978715	20978817	-	3'-UTR,intron-Distal,intron-Proximal	4.17364	25.41787	HepG2	DDX6
chr1	20976209	20976260	-	intron-Distal	4.02527	5.85866	HepG2	ILF3
chr1	20978741	20978767	-	3'-UTR,intron-Distal,intron-Proximal	3.19423	4.74487	HepG2	FAM120A
chr1	20978746	20978824	-	3'-UTR,intron-Distal,intron-Proximal	4.53335	15.99318	K562	LARP4
chr1	20978780	20978821	-	3'-UTR,intron-Distal,intron-Proximal	5.13819	79.42304	HepG2	LARP4
chr1	20978731	20978820	-	3'-UTR,intron-Distal,intron-Proximal	3.02754	7.92093	HepG2	TIA1
chr1	20978651	20978706	-	3'-UTR,intron-Distal,intron-Proximal	3.61213	25.20118	K562	PABPC4
chr1	20978695	20978737	-	3'-UTR,intron-Distal,intron-Proximal	4.04343	9.80329	K562	DDX6
chr1	20978771	20978820	-	3'-UTR,intron-Distal,intron-Proximal	4.28778	43.10391	HepG2	DDX55
chr1	20978334	20978488	-	3'-UTR,intron-Distal,intron-Proximal	5.00742	16.56087	HepG2	UPF1
chr1	20978729	20978806	-	3'-UTR,intron-Distal,intron-Proximal	3.26584	6.85066	HepG2	UPF1
chr1	20976698	20976849	-	intron-Distal,intron-Proximal	4.59140	12.34903	HepG2	PCBP2
chr1	20977272	20977331	-	intron-Distal,intron-Proximal	3.83402	3.06143	HepG2	IGF2BP1
chr1	20978711	20978762	-	3'-UTR,intron-Distal,intron-Proximal	5.53896	80.80311	HepG2	LARP4
chr1	20978656	20978683	-	3'-UTR,intron-Distal	3.65337	5.74442	HepG2	LIN28B
chr1	20978737	20978795	-	3'-UTR,intron-Distal,intron-Proximal	4.14128	35.06740	K562	DDX6
chr1	20978778	20978796	-	3'-UTR,intron-Distal,intron-Proximal	5.97233	48.40071	HepG2	SUB1
chr1	20977611	20977677	-	intron-Distal	3.90622	3.29371	HepG2	IGF2BP1
chr1	20978631	20978695	-	3'-UTR,intron-Distal,intron-Proximal	3.08817	15.56465	HepG2	LARP4
chr1	20978746	20978855	-	3'-UTR,intron-Distal,intron-Proximal	4.55202	19.39753	K562	APOBEC3C
chr1	20978771	20978825	-	3'-UTR,intron-Distal,intron-Proximal	3.70366	12.66857	HepG2	GRSF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for PINK1-AS is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for PINK1-AS is not available on ENCORE database.
66 RBPs can affect the levels of PINK1-AS.

The Knockdown/knockout RNA-Seq assay for PINK1-AS is not available on ENCORE database.

66 RBPs can affect the gene expression of PINK1-AS :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PINK1-AS	ENSG00000117242.7	155.41370	259.50320	-0.73960	4.00430	2.73790	HepG2	AATF
PINK1-AS	ENSG00000117242.7	305.53300	439.91020	-0.52590	2.82070	1.87070	HepG2	ABCF1
PINK1-AS	ENSG00000117242.7	260.23910	360.68120	-0.47090	1.90900	1.45750	HepG2	AKAP1
PINK1-AS	ENSG00000117242.7	189.36900	282.21260	-0.57560	3.61390	2.75000	HepG2	AKAP8L
PINK1-AS	ENSG00000117242.7	170.35280	298.43570	-0.80890	4.70740	3.69590	HepG2	ASCC1
PINK1-AS	ENSG00000117242.7	912.11990	360.89540	1.33750	23.21470	21.74650	HepG2	BOP1
PINK1-AS	ENSG00000117242.7	205.79190	280.82170	-0.44850	2.53860	1.89630	HepG2	CKAP4
PINK1-AS	ENSG00000117242.7	528.06870	362.20940	0.54380	3.76310	2.47910	HepG2	CPSF7
PINK1-AS	ENSG00000117242.7	522.61910	334.58950	0.64330	7.31340	6.19180	HepG2	DAZAP1
PINK1-AS	ENSG00000117242.7	112.50760	345.51020	-1.61870	15.38840	14.03300	HepG2	DDX3X
PINK1-AS	ENSG00000117242.7	275.87480	407.18820	-0.56170	3.44470	2.32610	HepG2	DDX5
PINK1-AS	ENSG00000117242.7	194.35730	276.16300	-0.50680	2.46570	1.53990	HepG2	DHX30
PINK1-AS	ENSG00000117242.7	185.28480	286.33400	-0.62800	3.93980	3.11270	HepG2	DNAJC21
PINK1-AS	ENSG00000117242.7	428.83170	315.31960	0.44350	2.13840	1.57370	HepG2	EIF4A3
PINK1-AS	ENSG00000117242.7	225.89370	330.09520	-0.54720	3.48200	2.55940	HepG2	EIF4G1
PINK1-AS	ENSG00000117242.7	420.80370	316.20970	0.41220	2.15490	1.42960	HepG2	EIF4G2
PINK1-AS	ENSG00000117242.7	582.63330	386.33300	0.59260	5.97910	5.15200	HepG2	ETF1
PINK1-AS	ENSG00000117242.7	446.16670	274.47790	0.70080	5.75400	4.54570	HepG2	EWSR1
PINK1-AS	ENSG00000117242.7	192.33740	331.88980	-0.78710	2.47060	1.51520	HepG2	FTO
PINK1-AS	ENSG00000117242.7	254.84930	375.57780	-0.55950	2.79040	2.14700	HepG2	GPKOW
PINK1-AS	ENSG00000117242.7	160.38260	289.07690	-0.84990	5.21680	4.36730	HepG2	HNRNPA1
PINK1-AS	ENSG00000117242.7	413.53010	307.49850	0.42730	2.83690	1.89240	HepG2	HNRNPA2B1
PINK1-AS	ENSG00000117242.7	579.87650	321.53610	0.85070	8.02560	6.89050	HepG2	HNRNPC
PINK1-AS	ENSG00000117242.7	138.12220	319.41100	-1.20950	13.34380	12.08950	HepG2	HNRNPU
PINK1-AS	ENSG00000117242.7	442.48940	302.41010	0.54900	2.69690	1.48810	HepG2	HSPD1
PINK1-AS	ENSG00000117242.7	267.55400	370.59750	-0.47000	2.80060	2.07200	HepG2	IGF2BP1
PINK1-AS	ENSG00000117242.7	483.88570	320.02250	0.59640	3.40410	2.71110	HepG2	MATR3
PINK1-AS	ENSG00000117242.7	404.81080	242.57660	0.73870	2.97050	1.87810	HepG2	METAP2
PINK1-AS	ENSG00000117242.7	134.72480	327.56300	-1.28180	9.99190	8.83200	HepG2	NCBP2
PINK1-AS	ENSG00000117242.7	523.54390	331.77840	0.65800	6.34120	5.18890	HepG2	NOL12
PINK1-AS	ENSG00000117242.7	174.59320	317.80920	-0.86420	5.38530	4.35840	HepG2	NSUN2
PINK1-AS	ENSG00000117242.7	414.30240	322.87640	0.35960	2.18260	1.48830	HepG2	PRPF4
PINK1-AS	ENSG00000117242.7	190.35770	319.08660	-0.74520	5.88590	5.14800	HepG2	PTBP1
PINK1-AS	ENSG00000117242.7	183.47870	316.71220	-0.78760	5.25420	4.46530	HepG2	PUF60
PINK1-AS	ENSG00000117242.7	534.94480	336.20480	0.66990	8.26820	7.35710	HepG2	PUM1
PINK1-AS	ENSG00000117242.7	155.29430	286.14850	-0.88180	7.51610	6.58320	HepG2	PUS1
PINK1-AS	ENSG00000117242.7	210.13610	318.34220	-0.59930	2.11200	1.48980	HepG2	RAVER1
PINK1-AS	ENSG00000117242.7	340.08490	479.51880	-0.49570	3.35500	2.41940	HepG2	RBM15
PINK1-AS	ENSG00000117242.7	427.13080	322.89840	0.40350	2.29370	1.81010	HepG2	RBM22
PINK1-AS	ENSG00000117242.7	209.37070	330.74960	-0.65970	4.51010	3.74790	HepG2	RECQL
PINK1-AS	ENSG00000117242.7	221.96950	405.39290	-0.86900	7.10670	6.08650	HepG2	RPLP0
PINK1-AS	ENSG00000117242.7	172.83270	264.56590	-0.61430	2.90610	1.80180	HepG2	RPS5
PINK1-AS	ENSG00000117242.7	318.08730	537.12290	-0.75580	5.21490	4.27050	HepG2	SF3A3
PINK1-AS	ENSG00000117242.7	356.36610	151.89880	1.23010	3.36970	1.72980	HepG2	SFPQ
PINK1-AS	ENSG00000117242.7	299.10970	139.86680	1.09650	3.30630	1.84300	HepG2	SNRNP200
PINK1-AS	ENSG00000117242.7	211.44940	394.73890	-0.90060	4.91120	3.85770	HepG2	SNRNP70
PINK1-AS	ENSG00000117242.7	183.54660	346.73960	-0.91770	7.66240	6.96710	HepG2	SRSF1
PINK1-AS	ENSG00000117242.7	393.83930	312.70810	0.33270	1.91680	1.38300	HepG2	SRSF5
PINK1-AS	ENSG00000117242.7	461.73710	299.88580	0.62260	5.01290	3.76640	HepG2	SUPT6H
PINK1-AS	ENSG00000117242.7	507.37920	349.35140	0.53830	3.48920	2.68610	HepG2	TARDBP
PINK1-AS	ENSG00000117242.7	132.60510	310.39930	-1.22700	11.78650	10.88100	HepG2	TIAL1
PINK1-AS	ENSG00000117242.7	393.45060	313.13980	0.32930	1.99360	1.49970	HepG2	TRIM56
PINK1-AS	ENSG00000117242.7	129.01790	379.94070	-1.55820	15.64090	14.09740	HepG2	U2AF1
PINK1-AS	ENSG00000117242.7	257.01500	459.89390	-0.83940	8.88640	7.91260	HepG2	UTP3
PINK1-AS	ENSG00000117242.7	538.82760	350.11960	0.62190	3.50380	2.31050	HepG2	XRCC6
PINK1-AS	ENSG00000117242.7	137.73690	219.80380	-0.67430	2.50880	1.81550	HepG2	XRN2
PINK1-AS	ENSG00000117242.7	42.17170	99.81070	-1.24290	4.43590	3.60190	K562	AKAP8L
PINK1-AS	ENSG00000117242.7	217.23330	122.37550	0.82780	3.94850	2.90480	K562	BOP1
PINK1-AS	ENSG00000117242.7	91.60530	46.70370	0.97180	3.07690	2.21290	K562	EIF4A3
PINK1-AS	ENSG00000117242.7	205.92730	144.42600	0.51170	2.58230	1.67170	K562	EIF4G2
PINK1-AS	ENSG00000117242.7	113.50060	168.30570	-0.56840	2.03630	1.30520	K562	FIP1L1
PINK1-AS	ENSG00000117242.7	146.13680	48.57020	1.58910	9.23760	8.20620	K562	FXR1
PINK1-AS	ENSG00000117242.7	323.24600	87.44600	1.88610	20.39180	18.85250	K562	HNRNPC
PINK1-AS	ENSG00000117242.7	79.52510	138.44440	-0.79980	2.65130	1.74210	K562	HNRNPM
PINK1-AS	ENSG00000117242.7	41.73810	97.51180	-1.22420	4.78040	3.59810	K562	HNRNPU
PINK1-AS	ENSG00000117242.7	56.74480	105.92930	-0.90050	2.91670	2.06760	K562	KIF1C
PINK1-AS	ENSG00000117242.7	87.53210	51.17200	0.77440	2.22010	1.40060	K562	MATR3
PINK1-AS	ENSG00000117242.7	204.29960	136.92720	0.57720	2.12520	1.39500	K562	PCBP3
PINK1-AS	ENSG00000117242.7	109.54010	191.07540	-0.80270	3.87480	2.87990	K562	PPIG
PINK1-AS	ENSG00000117242.7	246.12320	157.58650	0.64310	3.22910	2.34900	K562	PUF60
PINK1-AS	ENSG00000117242.7	237.16860	164.23440	0.53010	2.68470	1.73760	K562	PUM2
PINK1-AS	ENSG00000117242.7	50.75460	98.99540	-0.96380	2.50270	1.98030	K562	PUS1
PINK1-AS	ENSG00000117242.7	47.92360	91.34340	-0.93060	2.25500	1.52090	K562	RPS19
PINK1-AS	ENSG00000117242.7	150.78720	93.57490	0.68820	2.51230	1.48140	K562	SAFB
PINK1-AS	ENSG00000117242.7	162.08500	105.34440	0.62150	2.42120	1.65360	K562	SYNCRIP
PINK1-AS	ENSG00000117242.7	182.81520	65.95720	1.47070	7.02540	4.26430	K562	XRCC6
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PINK1-AS

General Information

Functions

Localization

Domains (AlphaFold: PINK1-AS)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PINK1-AS is not avaliable on ENCORE database.

16 proteins are bound to PINK1-AS RNA:

eCLIP assay for PINK1-AS is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PINK1-AS is not available on ENCORE database.

66 RBPs can affect the gene expression of PINK1-AS :

The Knockdown/knockout RNA-Seq assay for PINK1-AS is not available on ENCORE database.

No RBPs affect the alternative splcing events of PINK1-AS on ENCORE database.

The Knockdown/knockout RNA-Seq assay for PINK1-AS is not avaliable on ENCORE database.