OTUD5

General Information

Gene Name       : OTUD5
Gene ID             : ENSG00000068308.13
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: OTUD5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878OTUD5ENSG00000068308.1318.6024.7721.69ENCSR000AEF
HepG2OTUD5ENSG00000068308.1335.3723.1429.25ENCSR985KAT
K562OTUD5ENSG00000068308.1372.1058.4265.26ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for OTUD5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • OTUD5 RNA is bound by 35 proteins.  







eCLIP assay for OTUD5 is not avaliable on ENCORE database.





35 proteins are bound to OTUD5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX4877953748779592-3'-UTR,intron-Distal3.429764.34343K562ZC3H11A
chrX4877953248779641-3'-UTR,intron-Distal3.432549.95798K562UPF1
chrX4877955648779631-3'-UTR,intron-Distal3.674623.34442K562FUS
chrX4878026248780351-3'-UTR,intron-Distal,intron-Proximal3.788565.29636HepG2AKAP1
chrX4877972448779795-3'-UTR,intron-Distal4.532445.35992HepG2UPF1
chrX4878021048780381-3'-UTR,intron-Distal,intron-Proximal3.3289310.97143HepG2PCBP2
chrX4878017948780244-3'-UTR,intron-Distal,intron-Proximal4.556883.79000HepG2U2AF2
chrX4877974148779804-3'-UTR,intron-Distal3.262144.06768K562NOLC1
chrX4878028548780383-3'-UTR,intron-Distal,intron-Proximal5.0980746.00450K562PCBP1
chrX4878026148780365-3'-UTR,intron-Distal,intron-Proximal3.288245.67280HepG2PTBP1
chrX4878015448780196-3'-UTR,intron-Distal,intron-Proximal3.485724.96603K562UPF1
chrX4877971948779793-3'-UTR,intron-Distal4.1068014.16954K562UPF1
chrX4878020748780289-3'-UTR,intron-Distal,intron-Proximal3.3485911.18529K562YBX3
chrX4881425948814365-CDS,intron-Distal,intron-Proximal3.7003217.20996K562DROSHA
chrX4881439548814448-CDS,intron-Distal,intron-Proximal3.310873.34333HepG2DGCR8
chrX4878055848780573-CDS,intron-Distal,intron-Proximal3.028924.30396K562UCHL5
chrX4881438848814467-CDS,intron-Distal,intron-Proximal3.861157.47467K562GEMIN5
chrX4881432848814372-CDS,intron-Distal,intron-Proximal3.773227.82518K562GEMIN5
chrX4878054848780592-CDS,intron-Distal,intron-Proximal3.960274.29034K562U2AF2
chrX4881469648814706-CDS,intron-Distal7.1513269.80552K562DGCR8
chrX4881438248814494-CDS,intron-Distal,intron-Proximal3.949054.51074HepG2RBFOX2
chrX4878314948783198-CDS,intron-Distal,intron-Proximal4.012853.60441HepG2GRWD1
chrX4881470648814730-CDS,intron-Distal7.2436873.97545K562DGCR8
chrX4880141248801480-CDS,intron-Distal,intron-Proximal3.815227.09156HepG2PRPF8
chrX4881469748814732-CDS,intron-Distal5.7321011.43966HepG2DGCR8
chrX4881462848814684-CDS,intron-Distal3.916379.55557K562DROSHA
chrX4881437848814440-CDS,intron-Distal,intron-Proximal3.506356.94506K562DDX24
chrX4879181548791942-CDS,intron-Distal,intron-Proximal3.0668011.09028K562AQR
chrX4878312448783162-CDS,intron-Distal,intron-Proximal4.976065.86954K562UCHL5
chrX4881437848814469-CDS,intron-Distal,intron-Proximal4.2095414.36534HepG2PRPF4
chrX4881464648814719-CDS,intron-Distal4.808068.45462K562GEMIN5
chrX4879206748792140-CDS,intron-Distal,intron-Proximal3.6632612.50558K562UCHL5
chrX4879208048792138-CDS,intron-Distal,intron-Proximal3.445377.24294K562YBX3
chrX4881438548814437-CDS,intron-Distal,intron-Proximal3.9963512.48080K562DGCR8
chrX4879225648792346-CDS,intron-Distal,intron-Proximal3.7952310.46906K562SF3B4
chrX4881430448814357-CDS,intron-Distal,intron-Proximal3.159433.42485K562AKAP8L
chrX4879180448791848-CDS,intron-Distal,intron-Proximal3.950307.45042K562UCHL5
chrX4881424148814289-CDS,intron-Distal4.354695.04143K562GRWD1
chrX4881424948814269-CDS,intron-Distal3.085853.70975K562UCHL5
chrX4881463048814671-CDS,intron-Distal3.297083.56169K562RBM15
chrX4881431948814360-CDS,intron-Distal,intron-Proximal3.867804.20652K562DGCR8
chrX4878321548783280-CDS,intron-Distal3.9948011.89622K562UCHL5
chrX4878320548783302-CDS,intron-Distal,intron-Proximal4.849068.32768HepG2GRWD1
chrX4881436548814445-CDS,intron-Distal,intron-Proximal4.2858245.54061K562DROSHA
chrX4878049448780550-CDS,intron-Distal4.424065.82083HepG2GRWD1
chrX4879185148791970-CDS,intron-Distal,intron-Proximal3.355934.20336HepG2AQR
chrX4878329248783330-CDS,intron-Distal,intron-Proximal3.184014.38519K562BUD13
chrX4879201148792137-CDS,intron-Distal,intron-Proximal3.452017.54801HepG2GRWD1
chrX4881460448814655-CDS,intron-Distal4.351244.10604K562METAP2
chrX4881438748814449-CDS,intron-Distal,intron-Proximal3.037973.94389K562ZNF800
chrX4881427848814340-CDS,intron-Distal,intron-Proximal3.541286.32001K562DDX24
chrX4879174148791781-CDS,intron-Distal,intron-Proximal3.392076.78413K562ZNF622
chrX4881473048814748-CDS,intron-Distal4.818046.04484K562DGCR8
chrX4879191348791970-CDS,intron-Distal,intron-Proximal5.008396.45599K562PRPF8
chrX4881476848814800-CDS,intron-Distal4.871426.90654K562GEMIN5
chrX4879969048799721-intron-Distal3.790954.06709K562EIF4G2
chrX4881497748815059-intron-Distal,intron-Proximal4.1211513.44184K562GEMIN5
chrX4879480348794850-intron-Distal4.138553.57329K562XRN2
chrX4881099048811041-intron-Distal3.219383.77382HepG2HNRNPM
chrX4881078048810903-intron-Distal5.005567.12711K562HNRNPM
chrX4881023448810301-intron-Distal4.427415.31529HepG2SUGP2
chrX4879947248799537-intron-Distal5.1209420.12614K562EIF4G2
chrX4881491348814971-intron-Distal,intron-Proximal3.240838.34844K562DROSHA
chrX4879942148799472-intron-Distal4.5570610.61026K562EIF4G2
chrX4881490948814952-intron-Distal,intron-Proximal3.434196.05343K562GEMIN5
chrX4879962548799681-intron-Distal4.217006.26655K562EIF4G2
chrX4880991348809973-intron-Distal4.164734.03915HepG2SUGP2
chrX4881038948810483-intron-Distal3.541674.32378K562HNRNPM
chrX4881038448810433-intron-Distal3.941183.34098HepG2HNRNPM
chrX4878103048781087-intron-Distal,intron-Proximal4.052263.05889HepG2SF3B4
chrX4879944548799518-intron-Distal5.3521610.50009K562TARDBP
chrX4879142048791522-intron-Distal5.325619.21000K562HNRNPM
chrX4879953748799588-intron-Distal4.328989.68274K562EIF4G2
chrX4878086048780900-intron-Distal,intron-Proximal4.623634.09264K562AQR
chrX4881096548811037-intron-Distal3.847526.73852HepG2SUGP2
chrX4881096548811051-intron-Distal3.200675.12973HepG2MATR3
chrX4878083748780866-intron-Distal,intron-Proximal4.267203.85435K562PRPF8
chrX4878759948787755-intron-Distal3.118955.38148K562HNRNPL
chrX4878750648787633-intron-Distal4.303814.89163HepG2HNRNPL
chrX4881061948810728-intron-Distal3.221944.86332HepG2SUGP2
chrX4881083448810902-intron-Distal4.270424.31871HepG2HNRNPM
chrX4879942248799506-intron-Distal3.471013.99870K562IGF2BP1
chrX4881098648811105-intron-Distal4.922067.64982K562MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for OTUD5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for OTUD5 is not available on ENCORE database.

  • 47 RBPs can affect the levels of OTUD5.  








The Knockdown/knockout RNA-Seq assay for OTUD5 is not available on ENCORE database.





47 RBPs can affect the gene expression of OTUD5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
OTUD5ENSG00000068308.9908.45010701.998500.371802.493401.54530HepG2ADAR
OTUD5ENSG00000068308.9799.107701251.54330-0.647205.426904.71140HepG2AKAP1
OTUD5ENSG00000068308.91342.188501035.520400.374102.593001.83160HepG2ASCC1
OTUD5ENSG00000068308.9960.32300633.167800.600803.552602.49260HepG2BCCIP
OTUD5ENSG00000068308.9927.20880700.631100.404105.277804.42210HepG2DNAJC2
OTUD5ENSG00000068308.91219.02270894.184000.447004.469603.41410HepG2EWSR1
OTUD5ENSG00000068308.9979.11910713.654700.456203.837803.09550HepG2HNRNPA1
OTUD5ENSG00000068308.9959.48530788.557800.282902.652802.05880HepG2HNRNPU
OTUD5ENSG00000068308.9987.48480805.486200.293803.206902.42210HepG2ILF2
OTUD5ENSG00000068308.91068.476801282.42750-0.263302.043001.34300HepG2MSI2
OTUD5ENSG00000068308.9770.509901012.14030-0.393502.546201.85100HepG2PABPC4
OTUD5ENSG00000068308.9855.73540703.331100.282902.229701.56120HepG2PPIL4
OTUD5ENSG00000068308.91094.57290932.072200.231802.153601.59350HepG2PUS1
OTUD5ENSG00000068308.9836.82530702.247500.252802.136201.55770HepG2SAFB2
OTUD5ENSG00000068308.91001.66240818.942400.290503.153102.47360HepG2SMN1
OTUD5ENSG00000068308.91744.043401324.306700.397105.872505.21810HepG2SRFBP1
OTUD5ENSG00000068308.9911.03560773.080000.236801.967301.47620HepG2TRIM56
OTUD5ENSG00000068308.9797.358701133.35010-0.507303.474802.53360HepG2UBE2L3
OTUD5ENSG00000068308.9840.232501195.32490-0.508507.471406.56580HepG2UTP3
OTUD5ENSG00000068308.9820.37030610.023600.427302.017501.39000HepG2XRN2
OTUD5ENSG00000068308.9880.993601124.88910-0.352602.762802.09090HepG2ZC3H8
OTUD5ENSG00000068308.91544.582101361.658800.181801.940701.46070HepG2ZNF622
OTUD5ENSG00000068308.94782.315003821.541000.323506.419005.60630K562AGGF1
OTUD5ENSG00000068308.94728.215103976.486600.249702.129001.55290K562AKAP8L
OTUD5ENSG00000068308.94800.512904172.291700.202202.223401.41280K562ATP5C1
OTUD5ENSG00000068308.93141.200203882.92590-0.305803.425002.54990K562CPSF6
OTUD5ENSG00000068308.93869.235304335.03300-0.164001.904901.34560K562DDX47
OTUD5ENSG00000068308.95281.298704278.984600.303504.808503.60290K562DKC1
OTUD5ENSG00000068308.91312.636401884.05870-0.521404.333303.00260K562EIF3D
OTUD5ENSG00000068308.92247.816201796.084600.323604.018002.58260K562EIF4B
OTUD5ENSG00000068308.94039.709503353.200500.268602.139901.39090K562FIP1L1
OTUD5ENSG00000068308.91111.046201446.72550-0.380901.934101.35460K562G3BP2
OTUD5ENSG00000068308.92826.215103719.07910-0.396105.057704.03440K562GRSF1
OTUD5ENSG00000068308.92350.995601769.319800.410002.911301.85080K562IGF2BP2
OTUD5ENSG00000068308.95922.106304727.517700.324903.733202.65000K562MBNL1
OTUD5ENSG00000068308.93232.417703662.51040-0.180202.329601.58590K562MTPAP
OTUD5ENSG00000068308.92285.039001817.518000.330103.463001.94460K562PCBP1
OTUD5ENSG00000068308.91307.762701712.70050-0.389203.371902.54130K562PRPF8
OTUD5ENSG00000068308.94388.427205270.83340-0.264303.432602.23510K562PUM1
OTUD5ENSG00000068308.95020.770703842.428200.385806.567105.67950K562RBM15
OTUD5ENSG00000068308.92397.887701770.889200.437205.552304.55680K562SRSF1
OTUD5ENSG00000068308.92824.738703332.36150-0.238402.303901.55430K562SYNCRIP
OTUD5ENSG00000068308.92130.630601728.791200.301402.838802.00820K562TIA1
OTUD5ENSG00000068308.92104.234101696.598400.310602.539401.50200K562TRA2A
OTUD5ENSG00000068308.94907.303104246.315200.208602.864801.57200K562TROVE2
OTUD5ENSG00000068308.93609.532804314.85330-0.257504.293503.41750K562UPF1
OTUD5ENSG00000068308.93383.127703839.33430-0.182502.559401.74300K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for OTUD5 is not available on ENCORE database.





10 RBPs can affect the splicing of OTUD5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEOTUD5ENSG00000068308.9chrX-4879346148793629487922264879229148801450488015440.052000.000000.00014includedK562PRPF8
A3SSOTUD5ENSG00000068308.9chrX-4879222648792316487922264879229148801450488015440.054000.000000.00000longerK562AQR
A5SSOTUD5ENSG00000068308.9chrX-4878039748780572487804134878057248779304487801870.084000.006140.08535longerK562AQR
RIOTUD5ENSG00000068308.9chrX-4879173648792140487917364879188548791968487921400.784000.000010.00024includedHepG2SF3A3
RIOTUD5ENSG00000068308.9chrX-487917364879214048791736487918854879196848792140-0.233000.001490.09828excludedK562HNRNPU
RIOTUD5ENSG00000068308.9chrX-487917364879214048791736487918854879196848792140-0.399000.000110.00437excludedK562SRSF1
RIOTUD5ENSG00000068308.9chrX-4879173648792140487917364879188548791968487921400.619000.003670.03917includedHepG2QKI
RIOTUD5ENSG00000068308.9chrX-4879173648792140487917364879188548791983487921400.061000.000160.00553includedK562RBM22
RIOTUD5ENSG00000068308.9chrX-4879173648792140487917364879188548791968487921400.613000.001230.01103includedHepG2SF3B4
RIOTUD5ENSG00000068308.9chrX-4879173648792140487917364879188548791983487921400.072000.000010.00031includedHepG2RBM22
RIOTUD5ENSG00000068308.9chrX-4879173648792140487917364879188548791983487921400.060000.000880.01126includedK562EFTUD2
RIOTUD5ENSG00000068308.9chrX-487917364879214048791736487918854879196848792140-0.316000.004250.05801excludedK562FXR1
MXEOTUD5ENSG00000068308.9chrX-4878312248783326487917364879188548781127487813294879198348792140-0.113000.000040.001262includedK562SRSF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for OTUD5 is not avaliable on ENCORE database.