NDUFAF3

General Information

Gene Name       : NDUFAF3
Gene ID             : ENSG00000178057.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NDUFAF3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NDUFAF3ENSG00000178057.148.3827.4717.93ENCSR000AEF
HepG2NDUFAF3ENSG00000178057.1453.2419.6936.47ENCSR985KAT
K562NDUFAF3ENSG00000178057.1436.0126.7931.40ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NDUFAF3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NDUFAF3 RNA is bound by 9 proteins.  







eCLIP assay for NDUFAF3 is not avaliable on ENCORE database.





9 proteins are bound to NDUFAF3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr34905977749059822+3'-UTR,5'-UTR,CDS,intron-Proximal3.614994.84203K562DDX3X
chr34906052849060631+3'-UTR,CDS3.886755.49597K562IGF2BP1
chr34905976549059813+3'-UTR,5'-UTR,CDS,intron-Proximal3.651573.32861HepG2U2AF2
chr34905978749059813+3'-UTR,5'-UTR,CDS4.108585.55970K562YBX3
chr34906056749060652+3'-UTR,CDS3.450084.48818HepG2GRWD1
chr34906069449060778+3'-UTR,polyA_site3.520056.36450HepG2U2AF2
chr34905977749059787+3'-UTR,5'-UTR,CDS,intron-Proximal3.988045.15749K562YBX3
chr34905955449059600+5'-UTR,CDS,intron-Distal3.521833.38111K562DDX3X
chr34906048949060570+CDS3.555888.88471HepG2LARP4
chr34905989649059956+CDS4.541276.30966K562YBX3
chr34906030749060402+CDS,intron-Proximal3.889739.24553HepG2PPIG
chr34905964349059655+CDS,intron-Distal,intron-Proximal3.366024.57383K562YBX3
chr34905960049059622+CDS,intron-Distal4.205854.69091K562DDX3X
chr34905962249059644+CDS,intron-Distal4.077684.69091K562DDX3X
chr34906040349060468+CDS,intron-Proximal4.176806.79646HepG2PRPF8
chr34905976549059778+intron-Proximal3.861513.25055K562U2AF2
chr34906004349060102+intron-Proximal4.455944.32536HepG2SF3B4
chr34906020249060256+intron-Proximal4.384413.79199HepG2PPIG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NDUFAF3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NDUFAF3 is not available on ENCORE database.

  • 74 RBPs can affect the levels of NDUFAF3.  








The Knockdown/knockout RNA-Seq assay for NDUFAF3 is not available on ENCORE database.





74 RBPs can affect the gene expression of NDUFAF3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NDUFAF3ENSG00000178057.10165.47010298.87560-0.853007.344506.45120HepG2ACO1
NDUFAF3ENSG00000178057.10250.96380451.35920-0.846809.062507.93910HepG2AUH
NDUFAF3ENSG00000178057.10224.65170101.999601.139007.079206.17330HepG2BOP1
NDUFAF3ENSG00000178057.10169.65340260.05810-0.616202.849802.06500HepG2CIRBP
NDUFAF3ENSG00000178057.10193.82010298.78530-0.624404.500103.69100HepG2CKAP4
NDUFAF3ENSG00000178057.10390.94690247.269100.660806.155905.11210HepG2DAZAP1
NDUFAF3ENSG00000178057.1081.51490134.46320-0.722102.557701.68210HepG2DDX24
NDUFAF3ENSG00000178057.1069.83670160.30140-1.198704.741303.11490HepG2DDX27
NDUFAF3ENSG00000178057.10225.35400316.87000-0.491702.183601.62080HepG2DDX3X
NDUFAF3ENSG00000178057.1054.24380106.33330-0.971102.536701.60240HepG2DDX59
NDUFAF3ENSG00000178057.10298.46990171.208600.801705.127503.78490HepG2DDX5
NDUFAF3ENSG00000178057.10195.71840110.474100.825003.083702.34520HepG2DNAJC21
NDUFAF3ENSG00000178057.10415.87990281.600000.562402.477001.82460HepG2EIF4B
NDUFAF3ENSG00000178057.10166.17490243.95440-0.553902.858402.00960HepG2EIF4G1
NDUFAF3ENSG00000178057.10320.07400518.25340-0.695307.156506.26460HepG2ETF1
NDUFAF3ENSG00000178057.10172.75570292.03240-0.757405.015203.89390HepG2EWSR1
NDUFAF3ENSG00000178057.10131.97610239.54880-0.860004.037003.12190HepG2FIP1L1
NDUFAF3ENSG00000178057.1042.5142093.80580-1.141702.255101.34660HepG2FTO
NDUFAF3ENSG00000178057.10144.82900225.33350-0.637702.961702.15060HepG2FUBP3
NDUFAF3ENSG00000178057.10205.15460287.45940-0.486602.102701.33290HepG2G3BP2
NDUFAF3ENSG00000178057.10191.34740274.27340-0.519402.117501.50080HepG2HNRNPK
NDUFAF3ENSG00000178057.10182.51390125.884000.535802.496301.79630HepG2ILF2
NDUFAF3ENSG00000178057.10141.12120255.67580-0.857404.191003.16280HepG2LARP4
NDUFAF3ENSG00000178057.10195.35130115.993300.751902.961501.70530HepG2LIN28B
NDUFAF3ENSG00000178057.10497.20310293.581000.760002.958102.30840HepG2MATR3
NDUFAF3ENSG00000178057.10482.55560300.475200.683303.699102.97080HepG2NCBP2
NDUFAF3ENSG00000178057.1060.39910123.97270-1.037403.142502.19360HepG2PABPC1
NDUFAF3ENSG00000178057.10205.57070282.33650-0.457802.428001.85050HepG2PCBP1
NDUFAF3ENSG00000178057.1089.28200150.12660-0.749703.207802.38080HepG2PRPF4
NDUFAF3ENSG00000178057.1073.02950132.09680-0.855003.243502.37580HepG2PRPF8
NDUFAF3ENSG00000178057.10168.79860254.71390-0.593602.086001.32800HepG2RBM15
NDUFAF3ENSG00000178057.10234.95120433.15720-0.882508.818908.01440HepG2RBM22
NDUFAF3ENSG00000178057.10301.63500133.282801.178207.797006.12040HepG2RBM27
NDUFAF3ENSG00000178057.10189.20720108.232200.805702.425701.43480HepG2RCC2
NDUFAF3ENSG00000178057.10195.82450122.909600.671902.336401.59690HepG2RPS2
NDUFAF3ENSG00000178057.10220.20860125.477400.811303.494702.28170HepG2RPS5
NDUFAF3ENSG00000178057.1065.15000130.66050-1.004003.861002.95040HepG2RRP9
NDUFAF3ENSG00000178057.10190.36630109.749600.794502.420101.81140HepG2SAFB2
NDUFAF3ENSG00000178057.10203.53050111.467900.868504.175402.98120HepG2SMNDC1
NDUFAF3ENSG00000178057.10178.45270106.381800.746203.006801.35180HepG2SND1
NDUFAF3ENSG00000178057.10116.89600489.22300-2.0653039.7578038.43490HepG2SRFBP1
NDUFAF3ENSG00000178057.1057.04780107.88480-0.919202.477601.53590HepG2SRSF3
NDUFAF3ENSG00000178057.10136.93380253.99660-0.891306.691305.90030HepG2SRSF9
NDUFAF3ENSG00000178057.10282.97550424.74030-0.585905.207704.54750HepG2SSB
NDUFAF3ENSG00000178057.10338.96100262.825500.366902.033801.48460HepG2SUCLG1
NDUFAF3ENSG00000178057.10155.14250280.63610-0.855105.898905.13190HepG2TAF15
NDUFAF3ENSG00000178057.10370.32070228.671700.695404.931103.72880HepG2TUFM
NDUFAF3ENSG00000178057.1048.98740204.86660-2.0642015.1407013.62340HepG2U2AF1
NDUFAF3ENSG00000178057.10195.92940122.088400.682302.776901.67770HepG2XPO5
NDUFAF3ENSG00000178057.1096.01110148.14260-0.625702.393101.76250HepG2ZC3H8
NDUFAF3ENSG00000178057.10493.13960250.653200.9762011.8525010.76960K562AGGF1
NDUFAF3ENSG00000178057.10460.46930260.810500.820007.022705.94220K562AKAP8L
NDUFAF3ENSG00000178057.10284.21340432.27220-0.605002.361601.81300K562AQR
NDUFAF3ENSG00000178057.10398.46440273.642800.542103.807102.72160K562ATP5C1
NDUFAF3ENSG00000178057.10221.40730129.367100.775104.096402.52370K562CIRBP
NDUFAF3ENSG00000178057.10432.04640272.299700.665905.415403.82770K562CPEB4
NDUFAF3ENSG00000178057.1088.01230148.09740-0.750802.716101.60220K562FKBP4
NDUFAF3ENSG00000178057.1023.7628069.42750-1.546804.347903.41790K562G3BP2
NDUFAF3ENSG00000178057.1092.34150170.35270-0.883503.913803.21870K562HNRNPC
NDUFAF3ENSG00000178057.10188.94390122.838300.621102.463801.35680K562IGF2BP3
NDUFAF3ENSG00000178057.1044.96330141.18330-1.650705.215002.27310K562LARP4
NDUFAF3ENSG00000178057.1078.17320165.13460-1.078904.353202.54970K562LARP7
NDUFAF3ENSG00000178057.10248.17300126.585400.971107.015505.45600K562MATR3
NDUFAF3ENSG00000178057.10230.59180108.410201.088703.909702.67760K562PABPN1
NDUFAF3ENSG00000178057.1065.20640112.85350-0.791402.394801.48780K562PCBP2
NDUFAF3ENSG00000178057.10270.03750163.044000.727804.261803.21290K562PPIG
NDUFAF3ENSG00000178057.10306.27700123.260101.3130013.4733012.06200K562PTBP1
NDUFAF3ENSG00000178057.10450.92340258.691400.801602.136601.64700K562PUS1
NDUFAF3ENSG00000178057.10332.29420252.023600.398801.920201.41070K562RBM15
NDUFAF3ENSG00000178057.10172.13370118.131800.543002.080401.35700K562RBM22
NDUFAF3ENSG00000178057.1038.3607076.76210-1.000802.294901.41810K562SF3B1
NDUFAF3ENSG00000178057.10218.27390120.810200.853302.556401.32540K562SFPQ
NDUFAF3ENSG00000178057.10180.62060306.63930-0.763605.946004.63990K562SRPK2
NDUFAF3ENSG00000178057.10305.75390120.848301.339108.116606.91570K562SRSF1
NDUFAF3ENSG00000178057.10201.64360114.162600.820604.360402.99400K562SRSF5
NDUFAF3ENSG00000178057.10186.58750117.959700.661502.921702.07820K562TIA1
NDUFAF3ENSG00000178057.10181.63410115.816400.649102.662601.59470K562TRA2A
NDUFAF3ENSG00000178057.1027.8551067.23020-1.271203.248702.04360K562U2AF1
NDUFAF3ENSG00000178057.1035.0063069.45630-0.988502.629001.84560K562U2AF2
NDUFAF3ENSG00000178057.10424.35670321.593800.399902.689201.98000K562UPF1
NDUFAF3ENSG00000178057.10212.01100286.16350-0.432702.415701.62100K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NDUFAF3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of NDUFAF3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for NDUFAF3 is not avaliable on ENCORE database.