MRPL35

General Information

Gene Name       : MRPL35
Gene ID             : ENSG00000132313.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: MRPL35)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MRPL35ENSG00000132313.14119.33106.19112.76ENCSR000AEF
HepG2MRPL35ENSG00000132313.1466.46102.7784.61ENCSR985KAT
K562MRPL35ENSG00000132313.14178.15156.81167.48ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MRPL35 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MRPL35 RNA is bound by 5 proteins.  







eCLIP assay for MRPL35 is not avaliable on ENCORE database.





5 proteins are bound to MRPL35 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr28643822586438346+3'-UTR,intron-Distal3.534014.75223HepG2RBFOX2
chr28643834386438442+3'-UTR,intron-Distal3.138836.39842HepG2QKI
chr28643847686438543+3'-UTR,intron-Distal4.784877.83423K562YBX3
chr28643781386437853+3'-UTR,intron-Distal,intron-Proximal5.338734.77410HepG2SUB1
chr28642659186426658+5'-UTR,CDS,intron-Proximal5.0344219.37323K562DDX3X
chr28643435486434399+CDS,intron-Distal4.587145.82137K562YBX3
chr28643430386434354+CDS,intron-Distal,intron-Proximal3.028698.20042K562YBX3
chr28643324586433294+CDS3.6451516.30612K562DDX3X
chr28643322786433245+CDS,intron-Proximal4.5136313.88534K562DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MRPL35 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MRPL35 is not available on ENCORE database.

  • 85 RBPs can affect the levels of MRPL35.  








The Knockdown/knockout RNA-Seq assay for MRPL35 is not available on ENCORE database.





85 RBPs can affect the gene expression of MRPL35 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MRPL35ENSG00000132313.10795.60600962.57340-0.274802.451801.72480HepG2AKAP8L
MRPL35ENSG00000132313.10696.28690992.51690-0.511404.591003.84310HepG2BOP1
MRPL35ENSG00000132313.10890.937301089.69050-0.290502.375001.65660HepG2CALR
MRPL35ENSG00000132313.101030.531301478.96970-0.521203.608902.47990HepG2CCAR1
MRPL35ENSG00000132313.10519.33290911.18330-0.811109.122307.94210HepG2CPSF6
MRPL35ENSG00000132313.10964.370201659.77580-0.7833023.7359021.96530HepG2DAZAP1
MRPL35ENSG00000132313.10706.67720900.38080-0.349502.504901.85680HepG2DDX21
MRPL35ENSG00000132313.10845.798501232.37040-0.543104.048303.31350HepG2DDX6
MRPL35ENSG00000132313.10686.94590956.86660-0.478105.589204.61930HepG2DNAJC21
MRPL35ENSG00000132313.10728.05650948.40420-0.381504.940804.10890HepG2DNAJC2
MRPL35ENSG00000132313.10694.754701184.91290-0.770208.251207.26540HepG2EIF2S1
MRPL35ENSG00000132313.10906.044101309.56730-0.531404.065703.29460HepG2EIF4A3
MRPL35ENSG00000132313.101051.631501568.57070-0.576806.498705.27370HepG2EIF4G2
MRPL35ENSG00000132313.101436.178101750.21980-0.285303.098602.46840HepG2ETF1
MRPL35ENSG00000132313.10707.23730987.75840-0.482003.151501.79990HepG2FKBP4
MRPL35ENSG00000132313.10563.28700718.49670-0.351102.172101.46820HepG2FUBP3
MRPL35ENSG00000132313.10876.554401225.57750-0.483503.602002.84690HepG2G3BP1
MRPL35ENSG00000132313.10983.465601300.90110-0.403602.963802.04110HepG2G3BP2
MRPL35ENSG00000132313.10771.809001031.03980-0.417802.590201.60710HepG2GNB2L1
MRPL35ENSG00000132313.10447.128501032.89400-1.2079016.3950014.96000HepG2GPKOW
MRPL35ENSG00000132313.10551.22310966.03350-0.8094010.408209.27670HepG2HNRNPA1
MRPL35ENSG00000132313.10785.873701074.52930-0.451303.848203.04140HepG2HNRNPC
MRPL35ENSG00000132313.10856.041601159.74890-0.438105.798804.81000HepG2HNRNPF
MRPL35ENSG00000132313.101137.141901511.93840-0.411007.387906.33390HepG2HNRNPL
MRPL35ENSG00000132313.10894.085701067.42550-0.255702.408601.84010HepG2HNRNPU
MRPL35ENSG00000132313.10871.909901142.02270-0.389303.820802.98010HepG2IGF2BP1
MRPL35ENSG00000132313.10948.045301245.82890-0.394102.724302.05320HepG2IGF2BP2
MRPL35ENSG00000132313.10808.613701090.34060-0.431306.658905.57130HepG2ILF2
MRPL35ENSG00000132313.101207.920501561.28770-0.370202.076401.36470HepG2LARP4
MRPL35ENSG00000132313.10960.489401321.45790-0.460303.518502.77830HepG2MAGOH
MRPL35ENSG00000132313.10490.80150746.75330-0.605505.624503.90450HepG2NAA15
MRPL35ENSG00000132313.101039.526501360.24570-0.387902.558201.94740HepG2NCBP2
MRPL35ENSG00000132313.101240.346401645.82850-0.408105.066904.03800HepG2NOL12
MRPL35ENSG00000132313.10631.29000874.02290-0.469403.428602.59570HepG2NSUN2
MRPL35ENSG00000132313.10851.421701211.57000-0.508904.063703.20020HepG2PABPC4
MRPL35ENSG00000132313.10467.971901056.57390-1.1749030.1397027.94150HepG2PARN
MRPL35ENSG00000132313.10768.79600952.05900-0.308502.695301.96640HepG2PPIL4
MRPL35ENSG00000132313.10695.62230915.46310-0.396202.432201.67290HepG2PRPF8
MRPL35ENSG00000132313.10657.551501291.17200-0.9735023.7228022.41900HepG2PTBP1
MRPL35ENSG00000132313.101168.795001571.07850-0.426704.366503.63760HepG2PUF60
MRPL35ENSG00000132313.101148.076801667.75870-0.5387012.5876011.51790HepG2PUM1
MRPL35ENSG00000132313.101397.031001666.54700-0.254502.181601.58290HepG2PUM2
MRPL35ENSG00000132313.10611.62770975.86200-0.6740012.1965011.06010HepG2PUS1
MRPL35ENSG00000132313.101124.936301398.33210-0.313902.958702.31670HepG2QKI
MRPL35ENSG00000132313.101715.222801462.851300.229502.059201.59450HepG2RBM22
MRPL35ENSG00000132313.101186.145401436.93520-0.276702.813702.26920HepG2NELFE
MRPL35ENSG00000132313.101011.483101338.33760-0.404005.333104.51180HepG2RECQL
MRPL35ENSG00000132313.10944.012801249.31740-0.404303.548602.79070HepG2RPLP0
MRPL35ENSG00000132313.10453.22410647.86010-0.515504.155403.41780HepG2RPS19
MRPL35ENSG00000132313.10721.67660950.59210-0.397504.837104.02510HepG2SAFB2
MRPL35ENSG00000132313.10738.41410975.65630-0.401903.036102.29740HepG2SF3B1
MRPL35ENSG00000132313.101131.275401344.24380-0.248802.346201.79570HepG2SF3B4
MRPL35ENSG00000132313.101126.855101506.39790-0.418807.262406.21000HepG2SLBP
MRPL35ENSG00000132313.10730.696001108.55530-0.6013011.7459010.56380HepG2SMN1
MRPL35ENSG00000132313.10994.408901551.19860-0.6415013.5083012.26750HepG2SRSF5
MRPL35ENSG00000132313.10884.034601139.41120-0.366104.366903.52340HepG2SRSF7
MRPL35ENSG00000132313.10921.150901141.51870-0.309403.415302.81540HepG2SRSF9
MRPL35ENSG00000132313.101007.031501434.49290-0.510409.172808.34450HepG2SSB
MRPL35ENSG00000132313.101358.516201764.15090-0.376906.364805.49070HepG2SUCLG1
MRPL35ENSG00000132313.10580.59660742.02180-0.353902.375201.49970HepG2SUPT6H
MRPL35ENSG00000132313.10567.791601181.35170-1.0570013.0185011.73340HepG2SUPV3L1
MRPL35ENSG00000132313.101030.086801261.20990-0.292002.757202.19790HepG2TAF15
MRPL35ENSG00000132313.10642.23980960.77090-0.581105.403004.43920HepG2TARDBP
MRPL35ENSG00000132313.10893.016601158.84050-0.375903.443602.51470HepG2TIA1
MRPL35ENSG00000132313.10521.615301037.21940-0.9917018.2324017.15670HepG2TIAL1
MRPL35ENSG00000132313.10703.248901046.47410-0.573409.091308.16030HepG2TRIM56
MRPL35ENSG00000132313.101205.789701534.86010-0.348103.227902.27710HepG2TUFM
MRPL35ENSG00000132313.101287.808901624.61400-0.335202.127701.40000HepG2UBE2L3
MRPL35ENSG00000132313.10866.072501162.91110-0.425202.977402.22490HepG2XRN2
MRPL35ENSG00000132313.10502.52850882.76210-0.8128013.9852012.66810HepG2ZC3H8
MRPL35ENSG00000132313.102348.088703126.97450-0.413304.642903.91760K562AQR
MRPL35ENSG00000132313.101214.409401546.85660-0.349102.585401.74400K562BOP1
MRPL35ENSG00000132313.10586.28540860.40390-0.553403.412102.21620K562CCAR1
MRPL35ENSG00000132313.101364.734201787.11040-0.389004.629603.06610K562CCDC124
MRPL35ENSG00000132313.101299.173901644.73480-0.340303.244502.39390K562CPSF6
MRPL35ENSG00000132313.105414.323604454.890600.281303.532302.42710K562CELF1
MRPL35ENSG00000132313.10946.677301160.17510-0.293402.293501.34890K562DDX3X
MRPL35ENSG00000132313.101627.781602387.11700-0.5524011.087209.79220K562EIF2S2
MRPL35ENSG00000132313.101548.789101260.493000.297103.150102.51070K562FXR1
MRPL35ENSG00000132313.101133.675801570.30300-0.470004.880603.82910K562GPKOW
MRPL35ENSG00000132313.10995.642001382.80380-0.473905.004004.22480K562HNRNPC
MRPL35ENSG00000132313.102294.702201701.426600.431502.591001.39900K562HNRNPK
MRPL35ENSG00000132313.102241.455501629.215900.460202.864601.91570K562HNRNPM
MRPL35ENSG00000132313.101387.732701732.53440-0.320202.616701.46770K562IGF2BP3
MRPL35ENSG00000132313.101490.407201790.28770-0.264502.132201.38970K562MAGOH
MRPL35ENSG00000132313.101224.314501532.79690-0.324202.747901.87430K562METAP2
MRPL35ENSG00000132313.101805.312602024.44690-0.165301.991501.34590K562NSUN2
MRPL35ENSG00000132313.10873.227101739.35910-0.9941022.2494020.43880K562PTBP1
MRPL35ENSG00000132313.10749.073901543.28420-1.0428018.3659016.99970K562PUS1
MRPL35ENSG00000132313.101314.047501667.96640-0.344102.859602.00260K562RBM22
MRPL35ENSG00000132313.101239.412901881.28360-0.602104.008701.88980K562SMN1
MRPL35ENSG00000132313.10814.710601072.25550-0.396303.017401.93430K562SRFBP1
MRPL35ENSG00000132313.102168.825001705.125300.346903.591402.79290K562SRSF1
MRPL35ENSG00000132313.101220.846301610.29690-0.399403.600102.37130K562SRSF5
MRPL35ENSG00000132313.101124.405301725.75510-0.618107.254006.04860K562TARDBP
MRPL35ENSG00000132313.101237.614601664.67070-0.427704.749003.63250K562TIA1
MRPL35ENSG00000132313.101293.954401633.40200-0.336102.732501.64920K562TRA2A
MRPL35ENSG00000132313.10855.320201266.79660-0.566605.930004.42890K562TRIM56
MRPL35ENSG00000132313.101827.980701494.383000.290602.810002.00020K562U2AF2
MRPL35ENSG00000132313.101339.313202146.56730-0.6805018.6228016.94020K562UPF1
MRPL35ENSG00000132313.102813.376903522.76820-0.324403.172402.24030K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MRPL35 is not available on ENCORE database.





1 RBPs can affect the splicing of MRPL35 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMRPL35ENSG00000132313.10chr2+864343058643445086433228864334188643760286440917-0.075000.000090.02868excludedHepG2DKC1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MRPL35 is not avaliable on ENCORE database.