IFI35

General Information

Gene Name       : IFI35
Gene ID             : ENSG00000068079.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: IFI35)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878IFI35ENSG00000068079.716.1739.2627.71ENCSR000AEF
HepG2IFI35ENSG00000068079.723.8118.7321.27ENCSR985KAT
K562IFI35ENSG00000068079.78.167.637.89ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for IFI35 is not avaliable on ENCORE database.



Proteins bound to RNA
  • IFI35 RNA is bound by 3 proteins.  







eCLIP assay for IFI35 is not avaliable on ENCORE database.





3 proteins are bound to IFI35 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174116635141166437+3'-UTR4.133943.69113K562LIN28B
chr174116535541165400+CDS,intron-Proximal4.442153.20743HepG2PPIG
chr174116561641165679+CDS4.515935.27053HepG2PPIG
chr174116496641165062+intron-Proximal5.227578.16423HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for IFI35 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for IFI35 is not available on ENCORE database.

  • 85 RBPs can affect the levels of IFI35.  








The Knockdown/knockout RNA-Seq assay for IFI35 is not available on ENCORE database.





85 RBPs can affect the gene expression of IFI35 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
IFI35ENSG00000068079.3462.96120300.378300.624003.650802.57330HepG2ABCF1
IFI35ENSG00000068079.3369.30430237.908400.634305.105304.09030HepG2AKAP8L
IFI35ENSG00000068079.3617.76830326.698400.919008.791207.44340HepG2ASCC1
IFI35ENSG00000068079.3264.75540401.33210-0.600104.622603.77490HepG2AUH
IFI35ENSG00000068079.381.73110134.92770-0.723202.390401.82960HepG2BOP1
IFI35ENSG00000068079.3419.83670273.451400.618403.168202.12010HepG2CCAR1
IFI35ENSG00000068079.3520.26390310.386600.745105.819604.72500HepG2CIRBP
IFI35ENSG00000068079.3164.20170236.74520-0.527902.868002.19460HepG2CKAP4
IFI35ENSG00000068079.3569.94590327.202900.8005010.085209.00610HepG2CELF1
IFI35ENSG00000068079.3224.60340378.22650-0.751904.702403.90470HepG2DDX3X
IFI35ENSG00000068079.3383.01440203.248200.914104.580103.61220HepG2DDX55
IFI35ENSG00000068079.3435.16910226.547100.9417010.333009.19320HepG2DKC1
IFI35ENSG00000068079.3314.45430204.218200.622602.940301.99220HepG2EEF2
IFI35ENSG00000068079.3445.59450312.338100.512502.806002.20800HepG2EIF2S1
IFI35ENSG00000068079.3243.80550165.772300.556402.277601.44970HepG2EIF3D
IFI35ENSG00000068079.3499.28370345.165300.532502.957902.29630HepG2EIF4A3
IFI35ENSG00000068079.3212.06730336.07640-0.664302.939602.23200HepG2EIF4B
IFI35ENSG00000068079.3373.84620460.78410-0.301601.896201.37850HepG2ETF1
IFI35ENSG00000068079.3209.06920303.30650-0.536802.001001.34070HepG2FIP1L1
IFI35ENSG00000068079.3381.27860227.864100.742604.089002.74110HepG2FUS
IFI35ENSG00000068079.3457.26680348.272500.392701.889101.31280HepG2FXR1
IFI35ENSG00000068079.3309.64010140.423201.140703.638402.91280HepG2GPKOW
IFI35ENSG00000068079.3472.56910191.062001.3064014.7991013.49930HepG2HNRNPA1
IFI35ENSG00000068079.3223.57880131.505100.765603.560601.82310HepG2HNRNPD
IFI35ENSG00000068079.3223.58400327.15200-0.549102.706002.01520HepG2HNRNPK
IFI35ENSG00000068079.3462.05180320.468400.527804.832103.95950HepG2HNRNPL
IFI35ENSG00000068079.3307.36910211.120200.541803.612602.92840HepG2HNRNPU
IFI35ENSG00000068079.3445.02880328.386500.438402.311201.68830HepG2IGF2BP2
IFI35ENSG00000068079.3351.54690215.651500.704906.451605.37960HepG2ILF2
IFI35ENSG00000068079.3454.50160348.855100.381602.419901.70860HepG2NOL12
IFI35ENSG00000068079.3416.18830288.325600.529404.120603.40750HepG2PCBP1
IFI35ENSG00000068079.3256.45950188.301600.445602.210101.54390HepG2PPIL4
IFI35ENSG00000068079.3489.04150293.388600.737007.448406.63670HepG2PTBP1
IFI35ENSG00000068079.3228.03220333.01640-0.546403.013802.39630HepG2PUF60
IFI35ENSG00000068079.3606.44710241.188901.3301026.2377024.69820HepG2PUS1
IFI35ENSG00000068079.3230.75210385.13000-0.739005.806805.12500HepG2RBM22
IFI35ENSG00000068079.3412.02870304.107600.438102.847702.22330HepG2RECQL
IFI35ENSG00000068079.3261.00800152.476300.775403.668202.74780HepG2RPS3A
IFI35ENSG00000068079.3240.05650161.888900.568302.429701.54620HepG2SERBP1
IFI35ENSG00000068079.3140.27050269.57720-0.942505.093804.16010HepG2SF3A3
IFI35ENSG00000068079.379.98310132.64390-0.729802.328301.67820HepG2SF3B1
IFI35ENSG00000068079.3291.21660219.246000.409402.284201.69060HepG2SMN1
IFI35ENSG00000068079.3180.18550434.98970-1.2715017.1474016.17930HepG2SRFBP1
IFI35ENSG00000068079.3445.85530318.821900.483703.444202.93150HepG2SRSF1
IFI35ENSG00000068079.3199.44650328.81020-0.721305.434504.59980HepG2SRSF5
IFI35ENSG00000068079.3639.88980377.673300.7606010.556409.68010HepG2SSB
IFI35ENSG00000068079.3469.60570202.287001.214908.604907.51910HepG2SUPV3L1
IFI35ENSG00000068079.3193.68830286.58280-0.565203.171702.57700HepG2TAF15
IFI35ENSG00000068079.3327.12960205.125800.673304.673504.05820HepG2TIAL1
IFI35ENSG00000068079.3178.32230259.45000-0.541002.562201.95540HepG2U2AF1
IFI35ENSG00000068079.3342.22460185.118400.886403.650402.48420HepG2UPF2
IFI35ENSG00000068079.3372.34180245.739300.599404.473303.17790HepG2UTP18
IFI35ENSG00000068079.3370.49080199.130700.895604.665903.73320HepG2XRN2
IFI35ENSG00000068079.3158.4721088.729900.836603.304201.95280K562ABCF1
IFI35ENSG00000068079.3108.2788044.555201.281004.476803.35620K562BOP1
IFI35ENSG00000068079.3223.66790101.853501.134805.273103.74990K562CNOT7
IFI35ENSG00000068079.3130.2328047.375701.458806.928905.68040K562CPSF6
IFI35ENSG00000068079.3201.50850116.615200.789003.959502.49390K562DDX21
IFI35ENSG00000068079.3210.18450138.334900.603402.456901.83780K562DDX47
IFI35ENSG00000068079.3280.34550106.207601.4002013.7996012.37860K562EIF2S2
IFI35ENSG00000068079.3147.0409054.312801.436802.286301.38160K562EIF3A
IFI35ENSG00000068079.385.3748040.855001.063203.064302.09700K562FTO
IFI35ENSG00000068079.317.2085042.94690-1.319402.381001.73200K562G3BP2
IFI35ENSG00000068079.3112.5667045.232801.315205.081104.00850K562GPKOW
IFI35ENSG00000068079.3373.41290141.537701.3995013.4279011.74460K562GRSF1
IFI35ENSG00000068079.3205.36870115.808600.826404.721103.33010K562HNRNPA1
IFI35ENSG00000068079.3217.4590083.842001.374909.091508.06090K562HNRNPC
IFI35ENSG00000068079.3198.01950125.015400.663402.575301.55720K562HNRNPL
IFI35ENSG00000068079.3188.20240128.259300.553102.391501.56080K562HNRNPU
IFI35ENSG00000068079.3262.6566086.476801.6027013.0131011.33120K562HSPD1
IFI35ENSG00000068079.3199.65500116.667000.775003.389901.30360K562IGF2BP1
IFI35ENSG00000068079.3164.17400233.35920-0.507302.185801.39350K562MBNL1
IFI35ENSG00000068079.389.1921044.152001.014302.862001.96870K562METAP2
IFI35ENSG00000068079.3194.0755093.784301.049106.556005.36000K562MTPAP
IFI35ENSG00000068079.396.34170163.56750-0.763702.446301.62850K562NAA15
IFI35ENSG00000068079.3214.47900104.195801.041407.136006.01800K562NSUN2
IFI35ENSG00000068079.3173.5939097.850800.827002.729701.50480K562PABPC1
IFI35ENSG00000068079.334.3610075.54870-1.136602.987401.97270K562PCBP2
IFI35ENSG00000068079.3141.2093081.870600.786302.811801.37480K562PHF6
IFI35ENSG00000068079.3124.8284072.411200.785602.768001.94690K562PPIG
IFI35ENSG00000068079.3262.46550185.946800.497102.303201.33770K562PUM1
IFI35ENSG00000068079.3294.30410182.197400.691704.295303.09230K562PUM2
IFI35ENSG00000068079.3130.25690189.66720-0.542102.142601.60840K562RBM15
IFI35ENSG00000068079.3126.4726068.616200.882103.212902.14000K562RCC2
IFI35ENSG00000068079.3199.4351081.391501.292906.865505.56760K562RPS19
IFI35ENSG00000068079.340.6820080.89870-0.991702.720302.01840K562SRSF1
IFI35ENSG00000068079.3167.30380104.069700.684803.049401.81580K562SRSF7
IFI35ENSG00000068079.3232.0925072.306001.6824012.6876010.57510K562TIAL1
IFI35ENSG00000068079.3303.74570197.105200.623803.466501.87920K562UBE2L3
IFI35ENSG00000068079.3279.37080110.481601.3383013.1856011.75750K562UPF1
IFI35ENSG00000068079.3174.91830100.790100.795203.239901.93460K562UTP3
IFI35ENSG00000068079.3182.5652094.534700.949405.243504.01800K562WDR3
IFI35ENSG00000068079.3293.77760169.342400.794703.775702.73840K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for IFI35 is not available on ENCORE database.





1 RBPs can affect the splicing of IFI35 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEIFI35ENSG00000068079.3chr17+4116278641162954411587564115898541164195411642940.083000.000000.00005includedHepG2HNRNPL

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for IFI35 is not avaliable on ENCORE database.