DNAJC3

General Information

Gene Name       : DNAJC3
Gene ID             : ENSG00000102580.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: DNAJC3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DNAJC3ENSG00000102580.1411.2410.1710.71ENCSR000AEF
HepG2DNAJC3ENSG00000102580.149.9820.9015.44ENCSR985KAT
K562DNAJC3ENSG00000102580.145.877.026.45ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DNAJC3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DNAJC3 RNA is bound by 27 proteins.  







eCLIP assay for DNAJC3 is not avaliable on ENCORE database.





27 proteins are bound to DNAJC3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr139644519896445260+3'-UTR3.212767.60820HepG2IGF2BP1
chr139644701996447044+3'-UTR3.990299.53843HepG2LIN28B
chr139644523696445301+3'-UTR3.713093.07643HepG2LIN28B
chr139644424496444345+3'-UTR4.426696.86497HepG2UPF1
chr139644519296445291+3'-UTR3.286925.78351HepG2IGF2BP3
chr139644427496444320+3'-UTR3.729337.62172HepG2IGF2BP1
chr139644702796447045+3'-UTR5.219788.79592K562LIN28B
chr139644347996443545+3'-UTR4.567284.64560K562FAM120A
chr139644704596447090+3'-UTR6.1823322.96809K562LIN28B
chr139644473696444782+3'-UTR3.414058.00180HepG2FAM120A
chr139644575696445831+3'-UTR3.796973.97153HepG2UPF1
chr139644692996446991+3'-UTR3.071724.87202K562DDX6
chr139644704496447091+3'-UTR6.1212938.65551HepG2LIN28B
chr139644507396445156+3'-UTR3.444853.65035K562PUM2
chr139644432096444367+3'-UTR4.646418.53428HepG2FAM120A
chr139644430496444319+3'-UTR4.882278.64734HepG2IGF2BP3
chr139644502496445096+3'-UTR3.766825.00403K562IGF2BP1
chr139644426196444316+3'-UTR3.828898.04798K562UPF1
chr139644681996447002+3'-UTR4.055569.73672HepG2FUBP3
chr139644659796446663+3'-UTR4.037733.52163HepG2IGF2BP1
chr139644426696444320+3'-UTR4.6385021.14397HepG2FAM120A
chr139644589696445941+3'-UTR4.775336.67079HepG2LIN28B
chr139644555996445601+3'-UTR4.163504.23131HepG2IGF2BP1
chr139644693596446998+3'-UTR3.678226.58563HepG2DDX55
chr139644371696443778+3'-UTR3.370444.86917HepG2LIN28B
chr139644576796445824+3'-UTR3.245004.09267K562FAM120A
chr139644427296444304+3'-UTR4.996239.51995HepG2IGF2BP3
chr139644533696445384+3'-UTR4.175713.25872K562IGF2BP1
chr139632939996329451+5'-UTR4.802674.11950K562DDX3X
chr139632941896329485+5'-UTR5.5455750.01706HepG2DDX3X
chr139632948596329548+5'-UTR,CDS4.1393225.04443HepG2DDX3X
chr139632945196329577+5'-UTR,CDS3.655806.59200K562DDX3X
chr139636148096361493+CDS,intron-Proximal4.508953.99162HepG2DDX3X
chr139643924896439365+CDS,intron-Proximal3.150994.23709HepG2AQR
chr139632954896329590+CDS5.2045129.92548HepG2DDX3X
chr139640989896409958+CDS,intron-Distal4.469149.14010HepG2BCLAF1
chr139641231696412358+CDS3.039113.45280HepG2BCLAF1
chr139637743796377506+CDS5.220396.58593HepG2BCLAF1
chr139641231596412476+CDS,intron-Proximal3.134905.65099K562UCHL5
chr139644313796443261+CDS3.732547.59025HepG2SND1
chr139641238796412446+CDS3.333623.02345K562ZNF622
chr139644313196443199+CDS3.384185.15500HepG2BCLAF1
chr139640995396410009+CDS,intron-Distal3.634623.02250K562YBX3
chr139641597196416000+CDS3.461593.27569HepG2BCLAF1
chr139633978796339816+intron-Distal4.862155.44433K562EXOSC5
chr139634128696341342+intron-Distal5.5085211.33292K562EXOSC5
chr139639422196394286+intron-Distal4.177546.10949K562EXOSC5
chr139638461296384670+intron-Distal4.008643.07980HepG2HNRNPM
chr139634149096341526+intron-Distal5.229418.36828K562EXOSC5
chr139633402596334111+intron-Distal4.501555.04769HepG2PTBP1
chr139638353796383593+intron-Distal4.5647610.93796K562EXOSC5
chr139633937796339402+intron-Distal5.490819.68215K562EXOSC5
chr139643567696435856+intron-Distal4.279033.42844K562KHSRP
chr139638380996383852+intron-Distal5.164778.36828K562EXOSC5
chr139638156396381690+intron-Distal6.5851418.08872HepG2PCBP2
chr139633806496338100+intron-Distal5.030677.06230K562EXOSC5
chr139639376596393826+intron-Distal4.799976.88558K562HNRNPM
chr139639365296393710+intron-Distal4.334684.64592HepG2HNRNPM
chr139633962296339661+intron-Distal3.860935.20960K562EXOSC5
chr139639394896394007+intron-Distal4.403675.31505K562HNRNPM
chr139639376896393889+intron-Distal3.684905.70060HepG2HNRNPM
chr139633404196334105+intron-Distal4.004285.63677K562PTBP1
chr139638417296384232+intron-Distal3.023963.42293HepG2HNRNPC
chr139633910496339191+intron-Distal5.0937616.45282K562EXOSC5
chr139639519196395253+intron-Distal3.208503.14999K562EXOSC5
chr139638159096381742+intron-Distal3.893767.32452K562ILF3
chr139633896196338996+intron-Distal4.187756.41051K562EXOSC5
chr139639379096393901+intron-Distal4.7919525.34153K562EXOSC5
chr139633872596338787+intron-Distal6.0830215.65314K562EXOSC5
chr139635042896350481+intron-Distal4.325733.59909K562EXOSC5
chr139634834296348425+intron-Distal4.560644.94713K562HNRNPL
chr139634119696341258+intron-Distal5.9887616.32087K562EXOSC5
chr139639364796393718+intron-Distal3.9673811.44868K562EXOSC5
chr139634078496340828+intron-Distal3.338506.55061K562EXOSC5
chr139634688396346942+intron-Distal3.926903.59673K562HNRNPL
chr139634830996348400+intron-Distal4.516725.64178HepG2HNRNPL
chr139634828796348408+intron-Distal3.288773.35103HepG2QKI
chr139634139396341435+intron-Distal5.2235013.84610K562EXOSC5
chr139634072996340757+intron-Distal4.686976.08953K562EXOSC5
chr139639392396394009+intron-Distal4.774895.72853HepG2HNRNPM
chr139639363896393707+intron-Distal4.6148410.84649K562HNRNPM
chr139639446996394509+intron-Distal3.996133.79026K562HNRNPM
chr139633878796338831+intron-Distal5.9848915.32150K562EXOSC5
chr139634191896341957+intron-Distal4.369479.10500K562EXOSC5
chr139634095296340996+intron-Distal3.812745.50856K562EXOSC5
chr139634110696341139+intron-Distal4.522874.48560K562EXOSC5
chr139635036296350399+intron-Distal3.428794.02190K562EXOSC5
chr139634805996348104+intron-Distal4.366864.71638K562HNRNPL
chr139639382796393887+intron-Distal4.008685.30350K562HNRNPM
chr139633940296339451+intron-Distal6.0364715.65517K562EXOSC5
chr139633982996339881+intron-Distal6.0097715.31952K562EXOSC5
chr139643368396433744+intron-Distal4.235283.30687K562EXOSC5
chr139634460396344663+intron-Distal5.125118.87179HepG2HNRNPM
chr139634607996346167+intron-Distal3.764683.37631K562HNRNPL
chr139638417296384221+intron-Distal4.4270513.37617K562EXOSC5
chr139642717696427242+intron-Distal3.923783.42844K562KHSRP
chr139633889896338946+intron-Distal5.097307.06134K562EXOSC5
chr139638393496383992+intron-Distal4.5830211.25776K562EXOSC5
chr139633840596338455+intron-Distal4.348559.10500K562EXOSC5
chr139634692296347028+intron-Distal3.816186.76730K562AGGF1
chr139638657596386649+intron-Distal3.500984.02241K562EXOSC5
chr139643292096432962+intron-Distal3.834683.07980HepG2HNRNPM
chr139643339096433437+intron-Distal5.035516.71101HepG2HNRNPM
chr139638452696384561+intron-Distal4.509025.44433K562EXOSC5
chr139634460596344662+intron-Distal5.449708.94476K562HNRNPM
chr139643339096433434+intron-Distal3.629454.08493K562HNRNPM
chr139633778596337858+intron-Distal4.426553.59917K562EXOSC5
chr139638157396381688+intron-Distal4.476604.51355HepG2PTBP1
chr139634061296340638+intron-Distal4.597304.80466K562EXOSC5
chr139639380196393887+intron-Distal4.478283.51329HepG2MATR3
chr139634657096346678+intron-Distal3.841363.05187HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DNAJC3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DNAJC3 is not available on ENCORE database.

  • 85 RBPs can affect the levels of DNAJC3.  








The Knockdown/knockout RNA-Seq assay for DNAJC3 is not available on ENCORE database.





85 RBPs can affect the gene expression of DNAJC3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DNAJC3ENSG00000102580.10583.45600951.50170-0.705604.914803.63680HepG2ADAR
DNAJC3ENSG00000102580.103122.063201562.607300.9984014.4302013.31420HepG2AKAP1
DNAJC3ENSG00000102580.101697.670701292.930400.392802.992802.17650HepG2ASCC1
DNAJC3ENSG00000102580.102860.901001217.287401.2327019.3628017.66770HepG2CALR
DNAJC3ENSG00000102580.101607.877501228.371600.388302.990202.18680HepG2CIRBP
DNAJC3ENSG00000102580.10758.238901183.18220-0.6419013.4595012.22190HepG2CKAP4
DNAJC3ENSG00000102580.101837.923601349.888500.445104.279203.44110HepG2CPSF6
DNAJC3ENSG00000102580.10708.91940979.64710-0.466602.567001.90990HepG2DDX21
DNAJC3ENSG00000102580.101320.86180957.925400.463404.819203.60270HepG2DDX24
DNAJC3ENSG00000102580.10712.635301315.84870-0.884802.704301.42910HepG2DDX27
DNAJC3ENSG00000102580.102651.570901496.868300.8248011.5427010.34460HepG2DDX3X
DNAJC3ENSG00000102580.10751.09210949.60460-0.338304.026403.26950HepG2DNAJC2
DNAJC3ENSG00000102580.10937.48460690.165200.441803.268902.06580HepG2EFTUD2
DNAJC3ENSG00000102580.10926.06600672.057700.462403.289302.31030HepG2EIF3D
DNAJC3ENSG00000102580.101982.161301366.057400.537004.558803.74170HepG2EIF4A3
DNAJC3ENSG00000102580.102041.784501590.202700.360503.042502.18940HepG2EIF4G2
DNAJC3ENSG00000102580.10714.97820967.33390-0.436103.654502.92630HepG2HNRNPA1
DNAJC3ENSG00000102580.101843.113201546.396800.253102.839801.89460HepG2HNRNPA2B1
DNAJC3ENSG00000102580.101144.854001499.75450-0.389605.354704.39670HepG2HNRNPF
DNAJC3ENSG00000102580.101224.494201532.75900-0.323904.806503.93560HepG2HNRNPL
DNAJC3ENSG00000102580.10837.470601068.83890-0.351904.021003.30090HepG2HNRNPU
DNAJC3ENSG00000102580.101532.742001002.453700.612505.050103.40570HepG2HSPD1
DNAJC3ENSG00000102580.101210.839701476.83200-0.286502.360501.68950HepG2IGF2BP1
DNAJC3ENSG00000102580.101011.572101299.63230-0.361502.457901.81710HepG2IGF2BP2
DNAJC3ENSG00000102580.10765.955801081.80410-0.498108.313806.62170HepG2KIF1C
DNAJC3ENSG00000102580.102228.961501378.745800.692908.235207.11560HepG2MAGOH
DNAJC3ENSG00000102580.101908.926501386.467400.461203.539202.83360HepG2MATR3
DNAJC3ENSG00000102580.101753.732401419.130400.305301.904601.37380HepG2NCBP2
DNAJC3ENSG00000102580.101437.87610949.919900.598004.180202.43210HepG2NKRF
DNAJC3ENSG00000102580.10535.467601290.37400-1.268905.677504.07580HepG2NONO
DNAJC3ENSG00000102580.101302.30960825.006200.658503.755602.70770HepG2PABPC1
DNAJC3ENSG00000102580.101614.406101263.846300.353102.398601.72230HepG2PABPC4
DNAJC3ENSG00000102580.101706.121701243.143700.456607.846106.90720HepG2PCBP1
DNAJC3ENSG00000102580.10542.21140953.32410-0.8141014.0529012.46430HepG2PPIL4
DNAJC3ENSG00000102580.101396.698001690.75730-0.275604.094103.40270HepG2PUM1
DNAJC3ENSG00000102580.103135.842301689.522500.8921023.5852021.74240HepG2PUM2
DNAJC3ENSG00000102580.10666.399601215.17120-0.866705.690304.70200HepG2RAVER1
DNAJC3ENSG00000102580.101085.322001497.43480-0.464405.862904.67250HepG2RBM15
DNAJC3ENSG00000102580.102028.971101243.329600.706406.889605.86570HepG2RBM25
DNAJC3ENSG00000102580.10697.37730968.56190-0.473903.179402.04000HepG2RCC2
DNAJC3ENSG00000102580.101038.440301615.57260-0.637608.455107.36110HepG2RPLP0
DNAJC3ENSG00000102580.10493.55610653.94480-0.406002.856402.23270HepG2RPS19
DNAJC3ENSG00000102580.102138.022601613.518300.406002.392901.76720HepG2SF3A3
DNAJC3ENSG00000102580.10868.642401445.38370-0.734609.754508.50180HepG2SF3B1
DNAJC3ENSG00000102580.101646.507701316.953700.322104.016603.32570HepG2SF3B4
DNAJC3ENSG00000102580.101265.029801527.18320-0.271703.456002.68640HepG2SLBP
DNAJC3ENSG00000102580.10546.218101185.40120-1.117806.097303.84840HepG2SLTM
DNAJC3ENSG00000102580.10857.236301110.06620-0.372902.935802.27540HepG2SMN1
DNAJC3ENSG00000102580.102623.465501608.246600.705905.415004.31290HepG2SNRNP70
DNAJC3ENSG00000102580.103203.004801374.631601.2203062.6978061.11740HepG2SRSF1
DNAJC3ENSG00000102580.101228.126901473.45220-0.262702.710002.02090HepG2SRSF7
DNAJC3ENSG00000102580.101774.895701472.464300.269403.465702.90630HepG2SSB
DNAJC3ENSG00000102580.101104.61620865.338100.352102.251201.39970HepG2SUPT6H
DNAJC3ENSG00000102580.101041.774801235.61960-0.246202.088901.58920HepG2TAF15
DNAJC3ENSG00000102580.101738.434001423.375400.288402.091601.44870HepG2TARDBP
DNAJC3ENSG00000102580.101499.01760980.946700.611702.614001.57280HepG2TBRG4
DNAJC3ENSG00000102580.10508.798101038.68880-1.0296019.8109018.69570HepG2TIAL1
DNAJC3ENSG00000102580.10877.744101047.85350-0.255602.452001.91400HepG2TRIM56
DNAJC3ENSG00000102580.101817.361501096.147000.729305.000804.17000HepG2U2AF1
DNAJC3ENSG00000102580.10526.73670827.05680-0.650902.128301.46250HepG2UCHL5
DNAJC3ENSG00000102580.101975.868701430.943600.465409.349208.19650HepG2UPF1
DNAJC3ENSG00000102580.101978.149601470.813000.427406.997005.41170HepG2UTP18
DNAJC3ENSG00000102580.101689.623601381.520500.290303.509602.84980HepG2UTP3
DNAJC3ENSG00000102580.10737.182101377.96120-0.902403.073402.31010HepG2XRN2
DNAJC3ENSG00000102580.101011.587801282.12020-0.341903.081001.76990K562APOBEC3C
DNAJC3ENSG00000102580.101743.713101311.521100.410803.843103.17450K562AQR
DNAJC3ENSG00000102580.10226.84640317.74640-0.486202.685501.65230K562CCAR1
DNAJC3ENSG00000102580.10720.082401086.37170-0.593302.772001.70830K562CNOT7
DNAJC3ENSG00000102580.10988.359001175.50620-0.250201.941901.37800K562DDX47
DNAJC3ENSG00000102580.102378.885501862.512000.352902.422401.61040K562DKC1
DNAJC3ENSG00000102580.101087.891101341.33060-0.302102.959201.70070K562EIF2S1
DNAJC3ENSG00000102580.10965.15680775.882300.314802.898502.16560K562EIF2S2
DNAJC3ENSG00000102580.101094.36220646.965900.758207.337505.52250K562EIF3D
DNAJC3ENSG00000102580.10462.29600622.99010-0.430403.303801.90400K562EXOSC5
DNAJC3ENSG00000102580.101035.205601326.71860-0.357902.705202.10590K562FXR1
DNAJC3ENSG00000102580.10455.84520586.70270-0.364102.164101.62770K562HNRNPC
DNAJC3ENSG00000102580.10395.34590523.92860-0.406302.544001.45610K562HNRNPF
DNAJC3ENSG00000102580.10821.719801062.41550-0.370603.081301.96110K562HNRNPL
DNAJC3ENSG00000102580.101089.861801415.27420-0.376902.347101.42420K562IGF2BP2
DNAJC3ENSG00000102580.102723.746002057.919900.404302.334201.51050K562MBNL1
DNAJC3ENSG00000102580.10725.29270900.99680-0.313003.279802.47280K562NSUN2
DNAJC3ENSG00000102580.10630.83560798.43940-0.339902.058601.35440K562PPIG
DNAJC3ENSG00000102580.10886.92850587.935800.593105.267004.23110K562PRPF8
DNAJC3ENSG00000102580.10959.623101445.49390-0.591008.241707.13710K562PTBP1
DNAJC3ENSG00000102580.102642.647101585.375300.7371011.387609.72350K562PUF60
DNAJC3ENSG00000102580.102239.118101716.453500.383402.920402.36520K562PUS1
DNAJC3ENSG00000102580.102231.963701672.722400.416003.752403.07730K562RBM15
DNAJC3ENSG00000102580.10960.770901386.29610-0.529005.646404.39370K562RBM22
DNAJC3ENSG00000102580.10362.93450479.94740-0.403202.370001.45700K562RCC2
DNAJC3ENSG00000102580.10985.840701458.79880-0.565404.740103.26480K562NELFE
DNAJC3ENSG00000102580.10881.01770598.930400.556702.946602.10270K562RPS19
DNAJC3ENSG00000102580.10664.05990965.11850-0.539404.088602.84290K562RPS3
DNAJC3ENSG00000102580.101078.139901434.21960-0.411703.421202.63070K562TARDBP
DNAJC3ENSG00000102580.10344.44310505.96320-0.554803.459102.40770K562TIAL1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DNAJC3 is not available on ENCORE database.





1 RBPs can affect the splicing of DNAJC3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDNAJC3ENSG00000102580.10chr13+964381929643832596416086964162079643926096439409-0.061000.003590.03541excludedK562AQR
A3SSDNAJC3ENSG00000102580.10chr13+9641227196412475964122939641247596409878964100500.092000.003690.02211longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DNAJC3 is not avaliable on ENCORE database.