DNAJC13

General Information

Gene Name       : DNAJC13
Gene ID             : ENSG00000138246.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DNAJC13)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DNAJC13ENSG00000138246.1618.8216.4217.62ENCSR000AEF
HepG2DNAJC13ENSG00000138246.168.2212.7810.50ENCSR985KAT
K562DNAJC13ENSG00000138246.166.067.826.94ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DNAJC13 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DNAJC13 RNA is bound by 4 proteins.  







eCLIP assay for DNAJC13 is not avaliable on ENCORE database.





4 proteins are bound to DNAJC13 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3132136383132136585+5'-UTR3.447217.90828HepG2PRPF4
chr3132231894132231939+CDS3.448824.74886HepG2BCLAF1
chr3132166744132166783+CDS5.033786.37937HepG2BCLAF1
chr3132202218132202348+CDS,intron-Proximal4.3879616.88216HepG2BCLAF1
chr3132213073132213102+CDS4.938446.58593HepG2BCLAF1
chr3132169493132169510+CDS4.715075.37137HepG2BCLAF1
chr3132181285132181359+CDS,intron-Proximal3.706664.21358HepG2U2AF2
chr3132196634132196710+CDS3.764128.19964HepG2BCLAF1
chr3132175391132175416+CDS3.422593.57857HepG2BCLAF1
chr3132186032132186054+CDS4.469144.70478HepG2BCLAF1
chr3132181102132181225+intron-Distal,intron-Proximal4.179073.75546HepG2KHSRP
chr3132191572132191675+intron-Distal3.923783.71397K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DNAJC13 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DNAJC13 is not available on ENCORE database.

  • 78 RBPs can affect the levels of DNAJC13.  








The Knockdown/knockout RNA-Seq assay for DNAJC13 is not available on ENCORE database.





78 RBPs can affect the gene expression of DNAJC13 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DNAJC13ENSG00000138246.111804.962301381.684300.385406.605205.74770HepG2ACO1
DNAJC13ENSG00000138246.112204.036101317.774400.741907.896007.04820HepG2AKAP1
DNAJC13ENSG00000138246.111442.834601090.327700.404003.003102.18610HepG2ASCC1
DNAJC13ENSG00000138246.11812.205201318.93190-0.699505.565304.21770HepG2BCCIP
DNAJC13ENSG00000138246.111087.776901721.94420-0.662708.765007.77220HepG2BOP1
DNAJC13ENSG00000138246.11897.392701180.26010-0.395303.216602.11740HepG2YBX3
DNAJC13ENSG00000138246.111293.639201518.73050-0.231402.224401.63730HepG2CELF1
DNAJC13ENSG00000138246.111408.718501633.12250-0.213202.619601.89480HepG2DAZAP1
DNAJC13ENSG00000138246.111977.921201262.285400.647807.034106.07820HepG2DDX3X
DNAJC13ENSG00000138246.111534.271401321.868000.214902.036601.44170HepG2DKC1
DNAJC13ENSG00000138246.11808.263601158.99040-0.520007.209206.11810HepG2DNAJC21
DNAJC13ENSG00000138246.11793.146701148.66410-0.534309.939208.79490HepG2DNAJC2
DNAJC13ENSG00000138246.11671.090601042.38890-0.635305.794404.95410HepG2EIF2S1
DNAJC13ENSG00000138246.111253.522701005.346200.318202.556701.51920HepG2EIF3G
DNAJC13ENSG00000138246.111471.480101151.913900.353102.177201.60700HepG2EIF4A3
DNAJC13ENSG00000138246.11837.56540619.328900.435403.443802.57020HepG2FUBP3
DNAJC13ENSG00000138246.111386.014801078.200200.362202.339101.72430HepG2G3BP1
DNAJC13ENSG00000138246.111169.335501792.06830-0.615905.978805.06300HepG2GPKOW
DNAJC13ENSG00000138246.111293.272401738.42520-0.426806.594205.55130HepG2HNRNPF
DNAJC13ENSG00000138246.111238.469801487.68430-0.264503.638802.87290HepG2HNRNPL
DNAJC13ENSG00000138246.111325.379801711.86220-0.369203.852103.00870HepG2IGF2BP1
DNAJC13ENSG00000138246.111770.819301095.939500.692108.031106.94280HepG2IGF2BP2
DNAJC13ENSG00000138246.111050.276201320.63840-0.330505.070304.10310HepG2ILF2
DNAJC13ENSG00000138246.111553.856601162.785600.418203.125402.42860HepG2MAGOH
DNAJC13ENSG00000138246.112134.011001169.269800.8679010.863509.67470HepG2MATR3
DNAJC13ENSG00000138246.111534.438301196.793300.358402.358601.77140HepG2NCBP2
DNAJC13ENSG00000138246.111043.753001619.39480-0.6337011.039009.55480HepG2NOL12
DNAJC13ENSG00000138246.111086.905601279.76710-0.235702.203401.43910HepG2PARN
DNAJC13ENSG00000138246.111619.409101100.322400.5574010.479609.54670HepG2PTBP1
DNAJC13ENSG00000138246.111060.770501545.82230-0.543306.689105.81550HepG2PUF60
DNAJC13ENSG00000138246.111573.549101191.599800.401004.775103.98770HepG2QKI
DNAJC13ENSG00000138246.111630.637801996.55420-0.292103.214502.66690HepG2RBM22
DNAJC13ENSG00000138246.111530.821001081.482300.501206.003605.04520HepG2RBM25
DNAJC13ENSG00000138246.11856.927101170.10830-0.449402.868101.78700HepG2RCC2
DNAJC13ENSG00000138246.111785.622201224.523300.5441010.217309.29870HepG2NELFE
DNAJC13ENSG00000138246.111425.495001140.531100.321703.874603.16180HepG2RECQL
DNAJC13ENSG00000138246.11922.630301151.38400-0.319503.804203.06990HepG2SAFB2
DNAJC13ENSG00000138246.11653.03880939.97530-0.525503.443001.99270HepG2SART3
DNAJC13ENSG00000138246.111741.745101145.513300.6044012.5870011.46820HepG2SF3B4
DNAJC13ENSG00000138246.111280.117601482.12620-0.211402.383201.72580HepG2SLBP
DNAJC13ENSG00000138246.111756.450502255.04280-0.360506.327405.65410HepG2SRFBP1
DNAJC13ENSG00000138246.111663.020101195.694100.475908.416307.69340HepG2SRSF1
DNAJC13ENSG00000138246.111348.862201821.36880-0.433302.924101.89060HepG2SRSF3
DNAJC13ENSG00000138246.111368.596201707.91180-0.319502.904102.19380HepG2SRSF7
DNAJC13ENSG00000138246.111222.14740972.783500.329104.070703.42600HepG2SRSF9
DNAJC13ENSG00000138246.112419.939401957.925600.305504.841304.19960HepG2SSB
DNAJC13ENSG00000138246.11673.242501001.23180-0.572604.009502.54170HepG2STAU1
DNAJC13ENSG00000138246.11612.39120868.19010-0.503603.117001.94490HepG2STIP1
DNAJC13ENSG00000138246.112096.879801735.781800.272603.830103.11970HepG2SUCLG1
DNAJC13ENSG00000138246.111855.890501290.968100.523605.037504.16810HepG2SUPV3L1
DNAJC13ENSG00000138246.111338.471101074.809400.316403.255902.65450HepG2TAF15
DNAJC13ENSG00000138246.111333.553001666.79400-0.321802.415201.73130HepG2TARDBP
DNAJC13ENSG00000138246.11848.567601256.38820-0.566207.596506.84310HepG2TIAL1
DNAJC13ENSG00000138246.11868.841601267.49630-0.544809.671008.71370HepG2TRIM56
DNAJC13ENSG00000138246.11462.39660762.68840-0.722006.130004.99020HepG2UCHL5
DNAJC13ENSG00000138246.11785.524001182.41600-0.590003.173302.09650HepG2UPF2
DNAJC13ENSG00000138246.111132.678501415.55400-0.321603.979203.28030HepG2UTP3
DNAJC13ENSG00000138246.111764.217501262.914000.482202.862201.57830HepG2XRCC5
DNAJC13ENSG00000138246.11812.845401270.81330-0.644704.481903.56730HepG2XRN2
DNAJC13ENSG00000138246.11689.202001089.41420-0.660606.248505.42630K562AQR
DNAJC13ENSG00000138246.11853.109501096.87580-0.362602.464101.42400K562CPEB4
DNAJC13ENSG00000138246.11441.87580620.04780-0.488703.888702.96010K562CPSF6
DNAJC13ENSG00000138246.111404.767301801.34740-0.358703.739402.59890K562CELF1
DNAJC13ENSG00000138246.11598.00150746.80730-0.320602.544501.38450K562DDX21
DNAJC13ENSG00000138246.11383.29220635.05680-0.728409.601907.29380K562EIF2S1
DNAJC13ENSG00000138246.11530.08360827.00750-0.641704.455203.36050K562FIP1L1
DNAJC13ENSG00000138246.11389.34010551.77660-0.503103.028401.53030K562GEMIN5
DNAJC13ENSG00000138246.11725.633701099.24120-0.599205.108904.07950K562GRSF1
DNAJC13ENSG00000138246.11393.72820527.96050-0.423202.573601.47920K562HNRNPF
DNAJC13ENSG00000138246.11649.571601121.32310-0.787606.640805.42040K562HSPD1
DNAJC13ENSG00000138246.111208.105501602.54550-0.407603.485901.79020K562NOL12
DNAJC13ENSG00000138246.11690.36080904.76630-0.390204.789603.84510K562NSUN2
DNAJC13ENSG00000138246.11868.10350627.872600.467303.112802.22920K562PCBP3
DNAJC13ENSG00000138246.11705.85960481.608700.551405.277104.17150K562POLR2G
DNAJC13ENSG00000138246.11596.31140938.73840-0.654704.506603.42400K562PPIG
DNAJC13ENSG00000138246.11580.66300856.53170-0.560806.086605.13360K562PTBP1
DNAJC13ENSG00000138246.111386.076201665.99310-0.265402.400801.50510K562PUM2
DNAJC13ENSG00000138246.11600.49830821.34260-0.451803.616302.64360K562RBM22
DNAJC13ENSG00000138246.11743.34670892.82450-0.264302.037701.33090K562SF3A3
DNAJC13ENSG00000138246.11320.19030458.45610-0.517903.134102.02630K562SRFBP1
DNAJC13ENSG00000138246.11508.84730839.68030-0.722608.617907.37390K562SRSF1
DNAJC13ENSG00000138246.11601.04760792.99900-0.399802.859801.79060K562SRSF5
DNAJC13ENSG00000138246.11504.64690666.48420-0.401303.629802.27840K562SRSF7
DNAJC13ENSG00000138246.11652.07390483.053600.432803.457402.54000K562SYNCRIP
DNAJC13ENSG00000138246.11514.57470849.82490-0.723807.573506.33650K562TARDBP
DNAJC13ENSG00000138246.11619.30800819.74850-0.404503.286402.38350K562TIA1
DNAJC13ENSG00000138246.11790.58460959.34560-0.279102.582301.88770K562UPF1
DNAJC13ENSG00000138246.11941.561601227.20520-0.382203.216402.27770K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DNAJC13 is not available on ENCORE database.





5 RBPs can affect the splicing of DNAJC13 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDNAJC13ENSG00000138246.11chr3+132172909132173001132172442132172538132175078132175245-0.099000.008170.07787excludedHepG2U2AF2
SEDNAJC13ENSG00000138246.11chr3+1322032061322033321322022181322024211322034311322035160.120000.001780.09006includedHepG2FTO
SEDNAJC13ENSG00000138246.11chr3+1322032061322033371322022181322024211322034311322035160.241000.002590.04910includedK562U2AF1
SEDNAJC13ENSG00000138246.11chr3+1322032061322033371322022181322024211322034311322035160.111000.002890.07469includedK562UTP18
A3SSDNAJC13ENSG00000138246.11chr3+1321847941321849141321848381321849141321825391321826610.192000.016440.08082longerK562AQR
A3SSDNAJC13ENSG00000138246.11chr3+1322416381322418411322416711322418411322355471322356600.292000.003870.02310longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DNAJC13 is not avaliable on ENCORE database.