CHST3

General Information

Gene Name       : CHST3
Gene ID             : ENSG00000122863.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CHST3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CHST3ENSG00000122863.50.010.020.01ENCSR000AEF
HepG2CHST3ENSG00000122863.512.1911.0911.64ENCSR985KAT
K562CHST3ENSG00000122863.50.120.120.12ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CHST3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CHST3 RNA is bound by 6 proteins.  







eCLIP assay for CHST3 is not avaliable on ENCORE database.





6 proteins are bound to CHST3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr107377084773770981+3'-UTR3.264323.84724HepG2IGF2BP1
chr107377310073773192+3'-UTR3.759843.08342HepG2AKAP1
chr107376956473769663+3'-UTR3.688835.37876HepG2AKAP1
chr107376839973768535+3'-UTR4.235268.16501HepG2UPF1
chr107376827573768337+3'-UTR4.230534.68979HepG2UPF1
chr107376959773769713+3'-UTR4.999976.52213HepG2UPF1
chr107372432573724448+5'-UTR4.7869715.96203HepG2DDX3X
chr107372424773724314+5'-UTR3.840436.95142HepG2DDX3X
chr107372414073724224+5'-UTR4.7164610.02475HepG2DDX3X
chr107372599373726094+intron-Distal3.858865.12003HepG2HNRNPM
chr107373128973731383+intron-Distal4.5858710.19703HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CHST3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CHST3 is not available on ENCORE database.

  • 94 RBPs can affect the levels of CHST3.  








The Knockdown/knockout RNA-Seq assay for CHST3 is not available on ENCORE database.





94 RBPs can affect the gene expression of CHST3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CHST3ENSG00000122863.51272.476501015.590000.325202.180201.34040HepG2ABCF1
CHST3ENSG00000122863.51884.98260879.087601.1004042.9169041.23110HepG2ACO1
CHST3ENSG00000122863.51048.21360755.761600.471803.453202.34970HepG2ADAR
CHST3ENSG00000122863.51040.01890765.831800.441402.998701.91880HepG2AKAP8
CHST3ENSG00000122863.5708.30780911.68860-0.364202.378401.51060HepG2BCCIP
CHST3ENSG00000122863.5544.48430792.07740-0.540803.617302.59800HepG2BCLAF1
CHST3ENSG00000122863.5879.327501091.14640-0.311402.098101.57230HepG2BOP1
CHST3ENSG00000122863.5666.10190859.78300-0.368202.944902.15190HepG2CALR
CHST3ENSG00000122863.5392.28940696.40920-0.828005.282004.22240HepG2CNOT7
CHST3ENSG00000122863.5631.245201001.73560-0.666206.764605.72440HepG2CPSF6
CHST3ENSG00000122863.5797.34010562.988100.502002.832901.74540HepG2CSTF2
CHST3ENSG00000122863.51347.865401069.032800.334303.927403.18580HepG2CELF1
CHST3ENSG00000122863.5930.565901149.36770-0.304703.410802.60350HepG2DAZAP1
CHST3ENSG00000122863.5957.08620748.497900.354602.548701.89450HepG2DDX21
CHST3ENSG00000122863.5411.90330732.51320-0.8305010.326008.60730HepG2DDX24
CHST3ENSG00000122863.5547.27860838.62100-0.615704.632503.02300HepG2DDX27
CHST3ENSG00000122863.5604.57950875.49760-0.534204.536303.25720HepG2DDX5
CHST3ENSG00000122863.51404.90160625.697101.1668016.3216014.98410HepG2DDX6
CHST3ENSG00000122863.5343.84230734.00450-1.0940015.4962013.47070HepG2DHX30
CHST3ENSG00000122863.5355.61110761.02890-1.0977020.0302018.31970HepG2DNAJC21
CHST3ENSG00000122863.5560.25200754.27770-0.429005.167904.32150HepG2DNAJC2
CHST3ENSG00000122863.51094.83500810.711900.433403.151602.17240HepG2EEF2
CHST3ENSG00000122863.51145.31550647.105300.823606.778005.73310HepG2EIF4B
CHST3ENSG00000122863.5745.621101086.29490-0.542904.966503.89550HepG2EIF4G2
CHST3ENSG00000122863.52025.378501610.611500.330504.854104.09810HepG2ETF1
CHST3ENSG00000122863.5477.56920713.31830-0.578805.280903.77690HepG2FASTKD2
CHST3ENSG00000122863.51458.659401025.555200.508104.343903.39620HepG2FIP1L1
CHST3ENSG00000122863.5230.547101003.44480-2.1218017.4446015.04460HepG2FTO
CHST3ENSG00000122863.51249.06910670.658500.8971011.261309.96010HepG2FXR1
CHST3ENSG00000122863.5878.22100660.504900.410902.724801.84250HepG2G3BP2
CHST3ENSG00000122863.5837.80170585.966800.515704.258303.13520HepG2GEMIN5
CHST3ENSG00000122863.5945.11300768.319400.298701.924401.37460HepG2HNRNPA1
CHST3ENSG00000122863.5802.843601056.35250-0.395904.156903.04880HepG2HNRNPA2B1
CHST3ENSG00000122863.5605.36720854.60300-0.497404.067903.23920HepG2HNRNPC
CHST3ENSG00000122863.5972.935801398.46300-0.523408.676907.49660HepG2HNRNPF
CHST3ENSG00000122863.5580.904201083.68070-0.8996011.1813010.01900HepG2HNRNPLL
CHST3ENSG00000122863.5914.66500707.736200.369903.147602.13760HepG2HNRNPM
CHST3ENSG00000122863.5986.306201377.08950-0.481505.543904.55680HepG2IGF2BP1
CHST3ENSG00000122863.51016.25870593.484300.775903.167802.11300HepG2IGF2BP3
CHST3ENSG00000122863.5683.56640867.17980-0.343203.999803.13470HepG2ILF2
CHST3ENSG00000122863.52702.123501351.308200.9996012.8565011.08960HepG2LARP4
CHST3ENSG00000122863.5997.41510670.893600.572004.649403.80500HepG2MAGOH
CHST3ENSG00000122863.51497.04050674.610901.1499016.2362014.80110HepG2MATR3
CHST3ENSG00000122863.5644.344601105.19100-0.778405.353903.98050HepG2MTPAP
CHST3ENSG00000122863.51343.26530690.471200.9600012.2602010.97620HepG2NCBP2
CHST3ENSG00000122863.5667.56850960.88280-0.525404.283903.35820HepG2NSUN2
CHST3ENSG00000122863.5422.18850636.66770-0.592702.764301.87670HepG2PABPC1
CHST3ENSG00000122863.5474.41600614.76920-0.373901.990001.36900HepG2PABPC4
CHST3ENSG00000122863.51193.39390645.975200.8854015.4764014.22860HepG2PCBP1
CHST3ENSG00000122863.5403.05600949.98930-1.2369030.8033028.77440HepG2PRPF4
CHST3ENSG00000122863.5520.12290691.22400-0.410302.213801.48870HepG2PRPF8
CHST3ENSG00000122863.51380.65320657.343301.0705030.2640028.83950HepG2PTBP1
CHST3ENSG00000122863.5785.064101087.98800-0.470804.334803.60820HepG2PUF60
CHST3ENSG00000122863.51379.539901154.981400.256203.453402.80560HepG2PUM1
CHST3ENSG00000122863.5803.213501154.11660-0.522906.003905.02860HepG2PUM2
CHST3ENSG00000122863.51132.45050895.416300.338704.066703.34520HepG2PUS1
CHST3ENSG00000122863.5900.923901142.52580-0.342703.334802.40230HepG2RBM15
CHST3ENSG00000122863.51556.176501346.174300.209001.852101.40630HepG2RBM22
CHST3ENSG00000122863.51089.15330646.067800.7533010.675509.41110HepG2RBM25
CHST3ENSG00000122863.51306.79440864.230200.596405.355803.96150HepG2RBM27
CHST3ENSG00000122863.51251.66450731.527300.7748015.3897014.30760HepG2NELFE
CHST3ENSG00000122863.51319.73170681.377500.9536023.9537022.45650HepG2RECQL
CHST3ENSG00000122863.51401.25170640.379701.1296023.4068021.89580HepG2RPS19
CHST3ENSG00000122863.51129.37250797.007300.502803.934202.98750HepG2RPS2
CHST3ENSG00000122863.5983.69510683.733800.524703.243202.40120HepG2RRP9
CHST3ENSG00000122863.5397.59790756.03680-0.9271017.3609015.94520HepG2SAFB2
CHST3ENSG00000122863.51292.72960980.159700.399202.117601.52600HepG2SF3A3
CHST3ENSG00000122863.5571.421401072.63580-0.9085012.1886010.80540HepG2SF3B1
CHST3ENSG00000122863.51109.64370684.308700.6973012.3184011.21230HepG2SF3B4
CHST3ENSG00000122863.51373.16840881.677000.6391015.0038013.68860HepG2SMN1
CHST3ENSG00000122863.5422.631301193.49330-1.4977017.4097015.49590HepG2SNRNP70
CHST3ENSG00000122863.51906.638901520.456300.326405.260504.63040HepG2SRFBP1
CHST3ENSG00000122863.51595.70020714.298901.1595038.2389036.92860HepG2SRSF1
CHST3ENSG00000122863.51474.754201074.270500.457007.517706.55390HepG2SRSF5
CHST3ENSG00000122863.5912.952601373.93440-0.5897010.613209.40150HepG2SRSF7
CHST3ENSG00000122863.5338.10010685.21680-1.019108.921206.86170HepG2STAU1
CHST3ENSG00000122863.51822.755101221.706600.5771014.0848012.86170HepG2SUCLG1
CHST3ENSG00000122863.5593.92810841.04130-0.501902.983901.60540HepG2SUGP2
CHST3ENSG00000122863.5502.59220692.70450-0.462903.289502.26970HepG2SUPT6H
CHST3ENSG00000122863.5572.72580892.30010-0.639705.571904.66420HepG2SUPV3L1
CHST3ENSG00000122863.51092.01810642.119500.7660013.5607012.45710HepG2TAF15
CHST3ENSG00000122863.5822.794801056.22590-0.360302.550901.85070HepG2TARDBP
CHST3ENSG00000122863.5819.77510598.023700.454902.543201.58290HepG2TFIP11
CHST3ENSG00000122863.51248.36970877.429000.508604.937104.11140HepG2U2AF1
CHST3ENSG00000122863.5687.779401125.17760-0.710106.086104.81580HepG2UBE2L3
CHST3ENSG00000122863.5885.31660527.048900.748207.064205.84360HepG2UCHL5
CHST3ENSG00000122863.5474.57930869.25420-0.8731016.7422015.30670HepG2UPF1
CHST3ENSG00000122863.51229.14190870.326800.497902.979001.87630HepG2XRCC6
CHST3ENSG00000122863.51114.07760937.501300.248902.539501.89130HepG2ZC3H8
CHST3ENSG00000122863.5602.11910956.00980-0.6670012.7628011.80540HepG2ZNF622
CHST3ENSG00000122863.51.1223012.78930-3.510302.548001.67310K562ATP5C1
CHST3ENSG00000122863.532.655205.490502.572204.551703.74320K562DDX47
CHST3ENSG00000122863.525.818605.720502.174102.388001.68400K562GRSF1
CHST3ENSG00000122863.522.553701.990903.501804.470601.71030K562NFX1
CHST3ENSG00000122863.531.470002.927603.426105.039304.02870K562PRPF8
CHST3ENSG00000122863.51.2445012.09110-3.280301.978301.50450K562PUS1
CHST3ENSG00000122863.523.638802.984402.985603.476702.55820K562RPS19
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CHST3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CHST3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CHST3 is not avaliable on ENCORE database.