C2orf68

General Information

Gene Name       : C2orf68
Gene ID             : ENSG00000168887.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C2orf68)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878C2orf68ENSG00000168887.1015.9718.0617.02ENCSR000AEF
HepG2C2orf68ENSG00000168887.1031.5233.1832.35ENCSR985KAT
K562C2orf68ENSG00000168887.1022.8921.4222.16ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C2orf68 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C2orf68 RNA is bound by 8 proteins.  







eCLIP assay for C2orf68 is not avaliable on ENCORE database.





8 proteins are bound to C2orf68 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr28583592485835981-3'-UTR,intron-Distal4.046305.78731HepG2RBM15
chr28583592385835977-3'-UTR,intron-Distal3.896427.09919K562RBM15
chr28583615485836194-3'-UTR,CDS,intron-Distal3.347413.64266HepG2PPIG
chr28583547385835532-3'-UTR,intron-Distal4.2809025.72686HepG2XPO5
chr28583553285835622-3'-UTR,intron-Distal,intron-Proximal4.963406.10242HepG2TIA1
chr28583553085835623-3'-UTR,intron-Distal,intron-Proximal3.1823317.74374HepG2DDX55
chr28583856185838694-3'-UTR,CDS,intron-Distal,intron-Proximal3.235246.12368HepG2GRWD1
chr28583899685839158-5'-UTR,CDS,intron-Distal,intron-Proximal4.5254115.16545K562DDX3X
chr28583910285839162-5'-UTR,CDS,intron-Distal,intron-Proximal3.563709.46330HepG2NCBP2
chr28583905985839165-5'-UTR,CDS,intron-Distal,intron-Proximal4.8087234.08100HepG2DDX3X
chr28583880785838908-5'-UTR,CDS,intron-Distal,intron-Proximal3.4382910.84333HepG2PPIG
chr28583903685839102-CDS,intron-Distal,intron-Proximal4.016585.56074HepG2NCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C2orf68 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C2orf68 is not available on ENCORE database.

  • 71 RBPs can affect the levels of C2orf68.  








The Knockdown/knockout RNA-Seq assay for C2orf68 is not available on ENCORE database.





71 RBPs can affect the gene expression of C2orf68 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C2orf68ENSG00000168887.6757.426201204.71030-0.669505.655004.92630HepG2AKAP1
C2orf68ENSG00000168887.6674.24640834.14820-0.307002.071701.39760HepG2CALR
C2orf68ENSG00000168887.6807.57560498.972300.694506.718205.68230HepG2CPSF6
C2orf68ENSG00000168887.6844.869701069.81170-0.340603.360802.66610HepG2CELF1
C2orf68ENSG00000168887.6871.902101154.01690-0.404402.709902.08960HepG2DDX3X
C2orf68ENSG00000168887.6772.90660991.33490-0.359101.992701.46100HepG2DDX6
C2orf68ENSG00000168887.6520.62980844.17880-0.697304.335003.29250HepG2EWSR1
C2orf68ENSG00000168887.61270.27830985.712700.365802.322801.71100HepG2G3BP1
C2orf68ENSG00000168887.6908.50930728.183500.319102.073001.50460HepG2HNRNPA1
C2orf68ENSG00000168887.61054.30550809.981400.380202.862402.15850HepG2HNRNPC
C2orf68ENSG00000168887.6895.25100629.313300.508402.006301.38880HepG2HNRNPF
C2orf68ENSG00000168887.6907.39340619.681700.550105.284704.31670HepG2IGF2BP1
C2orf68ENSG00000168887.6825.52560550.533300.584403.299102.23360HepG2MTPAP
C2orf68ENSG00000168887.6479.04640808.61190-0.755304.380603.24840HepG2PABPC1
C2orf68ENSG00000168887.6567.67080991.31320-0.8043015.6759014.42260HepG2PCBP1
C2orf68ENSG00000168887.6624.86330473.736400.399402.923701.65560HepG2PKM
C2orf68ENSG00000168887.6832.956501008.65540-0.276102.817302.26530HepG2PTBP1
C2orf68ENSG00000168887.6826.007001088.82010-0.398503.315402.67160HepG2PUF60
C2orf68ENSG00000168887.6810.398201154.99140-0.511205.871404.90780HepG2PUM2
C2orf68ENSG00000168887.6602.87010879.30930-0.544502.432501.76850HepG2RAVER1
C2orf68ENSG00000168887.6606.861801127.38380-0.8935017.6795016.60150HepG2RBM22
C2orf68ENSG00000168887.6795.52960991.47050-0.317702.429701.79430HepG2RBM25
C2orf68ENSG00000168887.6816.703301090.91340-0.417702.414901.78620HepG2SF3A3
C2orf68ENSG00000168887.6901.143201050.21740-0.220901.812901.31750HepG2SF3B4
C2orf68ENSG00000168887.6622.52170835.60360-0.424705.319404.47660HepG2SMN1
C2orf68ENSG00000168887.6730.287301273.33170-0.8021018.9669017.96280HepG2SRFBP1
C2orf68ENSG00000168887.6740.250501096.16820-0.566408.747208.01290HepG2SRSF1
C2orf68ENSG00000168887.6809.855301075.06730-0.408704.800504.01330HepG2SRSF5
C2orf68ENSG00000168887.6850.25360618.321600.459403.813503.01550HepG2SRSF7
C2orf68ENSG00000168887.6586.99550891.76420-0.603305.346104.62350HepG2SRSF9
C2orf68ENSG00000168887.61435.052801105.541400.376305.342304.67580HepG2SSB
C2orf68ENSG00000168887.6919.586501222.63400-0.410905.275504.46490HepG2SUCLG1
C2orf68ENSG00000168887.6285.80260417.77490-0.547702.676201.69330HepG2TFIP11
C2orf68ENSG00000168887.6570.00570788.83600-0.468705.453804.71340HepG2TRIM56
C2orf68ENSG00000168887.6474.62570973.21880-1.0360011.9908010.65360HepG2U2AF1
C2orf68ENSG00000168887.6292.62280599.47180-1.034603.021201.98740HepG2U2AF2
C2orf68ENSG00000168887.6717.386001125.98010-0.650405.519504.31240HepG2UBE2L3
C2orf68ENSG00000168887.6580.72730864.80250-0.574503.347401.94200HepG2XRCC5
C2orf68ENSG00000168887.6632.31150967.08200-0.613003.990002.71810HepG2XRCC6
C2orf68ENSG00000168887.6783.81450613.561700.353201.996001.37230HepG2XRN2
C2orf68ENSG00000168887.61378.37540863.340000.6749015.6754014.29020HepG2ZC3H8
C2orf68ENSG00000168887.6892.518001064.03560-0.253602.674202.13490HepG2ZNF622
C2orf68ENSG00000168887.6579.953501136.66250-0.9708011.1721010.12670K562AGGF1
C2orf68ENSG00000168887.6933.492601248.88050-0.419903.950902.73320K562AKAP8
C2orf68ENSG00000168887.6615.378901182.71450-0.9426012.6908011.14760K562AKAP8L
C2orf68ENSG00000168887.6891.267001240.88720-0.477404.241703.08540K562ATP5C1
C2orf68ENSG00000168887.6852.66670652.958800.384902.453601.63610K562BOP1
C2orf68ENSG00000168887.6995.12680694.256000.519305.353704.27080K562CPSF6
C2orf68ENSG00000168887.61050.484501333.61360-0.344302.832601.35010K562DDX19B
C2orf68ENSG00000168887.6791.920801272.90110-0.684708.198206.54810K562DKC1
C2orf68ENSG00000168887.6962.63650706.440400.446303.504102.53850K562FMR1
C2orf68ENSG00000168887.6419.58910703.06800-0.744702.463001.33240K562HNRNPA2B1
C2orf68ENSG00000168887.61073.22990571.827500.9082013.8748012.61970K562HNRNPC
C2orf68ENSG00000168887.61203.19430967.937000.313802.481001.48570K562HNRNPL
C2orf68ENSG00000168887.6973.72940751.681900.373302.224601.39400K562HNRNPM
C2orf68ENSG00000168887.61541.555101239.090400.315002.297401.56770K562HSPD1
C2orf68ENSG00000168887.6662.401701255.27620-0.9222010.531108.62480K562KIF1C
C2orf68ENSG00000168887.6863.388301201.51040-0.476804.023202.65270K562MAK16
C2orf68ENSG00000168887.6877.415601406.20960-0.680508.608406.82170K562MBNL1
C2orf68ENSG00000168887.6847.28130646.997600.389002.997702.08390K562METAP2
C2orf68ENSG00000168887.6464.33160985.64050-1.0859011.541809.24730K562NAA15
C2orf68ENSG00000168887.6288.95270614.87440-1.089505.151503.68600K562PABPN1
C2orf68ENSG00000168887.6360.10120630.60500-0.808309.608107.07370K562PCBP1
C2orf68ENSG00000168887.6397.72570573.88290-0.529003.818502.66880K562PCBP2
C2orf68ENSG00000168887.6925.72870755.958600.292202.010501.32690K562POLR2G
C2orf68ENSG00000168887.6425.14800599.16420-0.495003.047202.25890K562PRPF8
C2orf68ENSG00000168887.6436.530001173.17430-1.4263019.3260017.92160K562PUS1
C2orf68ENSG00000168887.6584.838701142.87770-0.9666013.5348012.21860K562RBM15
C2orf68ENSG00000168887.6301.56310562.25440-0.898803.158201.84960K562SF1
C2orf68ENSG00000168887.6385.55420645.81430-0.744203.100001.77370K562SNRNP200
C2orf68ENSG00000168887.6788.80750949.71830-0.267802.565801.65930K562SRPK2
C2orf68ENSG00000168887.6655.42510493.139800.410302.389301.52410K562TIAL1
C2orf68ENSG00000168887.61332.56740996.163700.419705.822804.82470K562UPF1
C2orf68ENSG00000168887.6723.282401189.22760-0.717403.352101.88250K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C2orf68 is not available on ENCORE database.





12 RBPs can affect the splicing of C2orf68 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC2orf68ENSG00000168887.6chr2-8583859685838696858365578583670985838790858388640.147000.000020.00341includedHepG2QKI
SEC2orf68ENSG00000168887.6chr2-8583859685838696858365578583670985838790858388640.207000.000000.00081includedHepG2TIA1
SEC2orf68ENSG00000168887.6chr2-8583859685838696858365578583670985838790858388640.149000.000020.00059includedK562PUS1
SEC2orf68ENSG00000168887.6chr2-8583851485838696858365578583670985838790858388640.124000.000040.01370includedK562LARP4
SEC2orf68ENSG00000168887.6chr2-858385148583869685836557858367098583879085838864-0.073000.002240.07655excludedHepG2MATR3
SEC2orf68ENSG00000168887.6chr2-8583859685838696858365578583670985838790858388640.184000.000280.02958includedHepG2DDX6
SEC2orf68ENSG00000168887.6chr2-8583851985838696858365578583670985838790858388640.154000.000090.00346includedHepG2SRSF1
SEC2orf68ENSG00000168887.6chr2-858385968583869685836557858367098583879085838864-0.074000.000800.02576excludedHepG2SF3A3
SEC2orf68ENSG00000168887.6chr2-858385968583869685836557858367098583879085838864-0.278000.000640.04849excludedHepG2TIAL1
SEC2orf68ENSG00000168887.6chr2-8583859685838696858365578583670985838790858388640.139000.000200.01013includedK562UTP18
SEC2orf68ENSG00000168887.6chr2-8583859685838696858365578583670985838790858388640.098000.001880.04398includedK562RBM15
SEC2orf68ENSG00000168887.6chr2-8583859685838696858365578583670985838790858388640.119000.000290.01060includedK562AGGF1
A3SSC2orf68ENSG00000168887.6chr2-858365578583677685836557858367098583859685838696-0.612000.000270.02978shorterK562AGGF1
A3SSC2orf68ENSG00000168887.6chr2-858365578583677685836557858367098583859685838656-0.597000.000960.04735shorterK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C2orf68 is not avaliable on ENCORE database.