C20orf194

General Information

Gene Name       : C20orf194
Gene ID             : ENSG00000088854.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C20orf194)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878C20orf194ENSG00000088854.121.000.940.97ENCSR000AEF
HepG2C20orf194ENSG00000088854.126.267.556.90ENCSR985KAT
K562C20orf194ENSG00000088854.121.611.251.43ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C20orf194 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C20orf194 RNA is bound by 24 proteins.  







eCLIP assay for C20orf194 is not avaliable on ENCORE database.





24 proteins are bound to C20orf194 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2032326653232763-3'-UTR,intron-Distal3.204763.13533HepG2UPF1
chr2032622913262346-3'-UTR,CDS,intron-Distal3.616743.86355HepG2PPIG
chr2032400743240159-3'-UTR,CDS,intron-Distal,intron-Proximal5.1187144.36099HepG2PRPF8
chr2032400493240142-3'-UTR,CDS,intron-Distal,intron-Proximal3.856863.88924K562PRPF8
chr2032366553236719-3'-UTR,CDS,intron-Distal4.644955.64460HepG2GRWD1
chr2032401273240177-3'-UTR,CDS,intron-Distal4.034624.21087HepG2GRWD1
chr2032368503236903-3'-UTR,CDS,intron-Distal,intron-Proximal4.617674.57682HepG2SF3B4
chr2032327993232883-3'-UTR,intron-Distal4.525113.35877HepG2UPF1
chr2032622903262352-3'-UTR,CDS,intron-Distal3.533765.28199HepG2GRWD1
chr2032329233233038-3'-UTR,intron-Distal,intron-Proximal4.789724.49605HepG2UPF1
chr2032328153232890-3'-UTR,intron-Distal3.915953.65594HepG2EIF3H
chr2032957483295769-CDS,intron-Distal,intron-Proximal4.895156.56499HepG2PPIG
chr2033568963356945-CDS,intron-Distal4.9620611.47391HepG2BCLAF1
chr2032973653297423-CDS,intron-Distal,intron-Proximal3.116367.77882HepG2PPIG
chr2033113213311329-CDS,intron-Distal3.054105.07457HepG2BCLAF1
chr2033401993340257-CDS,intron-Distal,intron-Proximal4.069826.44495HepG2U2AF2
chr2033211493321213-CDS,intron-Distal,intron-Proximal3.630756.02862HepG2GRWD1
chr2033129263312958-CDS,intron-Distal,intron-Proximal4.470443.82843HepG2PPIG
chr2033243603324378-CDS,intron-Distal3.153764.61799HepG2BCLAF1
chr2033556703355746-CDS,intron-Distal,intron-Proximal4.919196.93329K562DDX24
chr2033055773305662-CDS,intron-Distal,intron-Proximal5.215596.40247K562SF3B4
chr2033556893355741-CDS,intron-Distal4.602563.33922HepG2EIF3H
chr2033028433302906-CDS,intron-Distal,intron-Proximal3.718767.40563HepG2PPIG
chr2033292373329268-CDS,intron-Distal3.822954.80912HepG2PPIG
chr2033401603340213-CDS,intron-Distal,intron-Proximal3.979409.57619HepG2PPIG
chr2033212643321298-CDS,intron-Distal,intron-Proximal4.116685.75388HepG2BUD13
chr2033129263312948-CDS,intron-Distal,intron-Proximal3.228305.35431HepG2BCLAF1
chr2033546913354716-CDS,intron-Distal,intron-Proximal5.165307.49561HepG2BCLAF1
chr2033291693329232-CDS,intron-Distal,intron-Proximal3.438426.24463HepG2GRWD1
chr2033556723355776-CDS,intron-Distal,intron-Proximal3.324316.67170K562ZNF622
chr2033556363355693-CDS,intron-Distal,intron-Proximal3.950554.75655HepG2PRPF8
chr2032964193296432-CDS,intron-Distal4.808416.21892HepG2PPIG
chr2032973933297431-CDS,intron-Distal3.580347.58656HepG2BCLAF1
chr2033212453321301-CDS,intron-Distal,intron-Proximal3.7246213.46566HepG2U2AF2
chr2033556743355705-CDS,intron-Distal,intron-Proximal4.1286925.01895HepG2BCLAF1
chr2032786763278688-CDS,intron-Distal3.173845.00751HepG2BCLAF1
chr2033291703329237-CDS,intron-Distal,intron-Proximal3.187965.51671HepG2PPIG
chr2032963813296419-CDS,intron-Distal,intron-Proximal5.4161610.63730HepG2PPIG
chr2033630733363125-CDS,intron-Distal,intron-Proximal3.523904.99842HepG2PPIG
chr2033556753355745-CDS,intron-Distal,intron-Proximal4.1664315.36431HepG2PPIG
chr2033033283303398-CDS,intron-Distal,intron-Proximal4.744453.91589K562SF3B4
chr2032957523295765-CDS,intron-Distal3.105654.61799HepG2BCLAF1
chr2033212863321341-CDS,intron-Distal,intron-Proximal4.901974.82767HepG2SF3B4
chr2032963513296402-CDS,intron-Distal,intron-Proximal4.360308.11807HepG2PRPF8
chr2032775573277595-CDS,intron-Distal3.310056.19339HepG2BCLAF1
chr2032775453277614-CDS,intron-Distal,intron-Proximal3.823895.09028HepG2U2AF2
chr2033547353354802-CDS,intron-Distal,intron-Proximal4.1563418.83547HepG2BCLAF1
chr2032973693297393-CDS,intron-Distal,intron-Proximal3.264026.09950HepG2BCLAF1
chr2033212503321342-CDS,intron-Distal,intron-Proximal4.200714.69223K562SF3B4
chr2033291663329217-CDS,intron-Distal,intron-Proximal3.3855911.49744HepG2BCLAF1
chr2033620263362087-CDS,intron-Distal4.8262610.13662HepG2BCLAF1
chr2033211503321209-CDS,intron-Distal,intron-Proximal3.328618.77723HepG2PPIG
chr2033401653340236-CDS,intron-Distal4.2865514.01444HepG2BCLAF1
chr2033557053355745-CDS,intron-Distal3.4491416.38648HepG2BCLAF1
chr2033129653313021-CDS,intron-Distal,intron-Proximal3.610346.51722HepG2U2AF2
chr2033275943327615-intron-Distal3.714505.54651HepG2SUGP2
chr2033275743327586-intron-Distal6.0549419.02321HepG2SUGP2
chr2033275153327574-intron-Distal5.0212732.86245HepG2SUGP2
chr2033278103327904-intron-Distal3.9634414.87638HepG2SUGP2
chr2032908403290913-intron-Distal4.796764.40618K562PTBP1
chr2032400543240126-intron-Distal,intron-Proximal4.831154.09264K562AQR
chr2033279773328027-intron-Distal3.965759.50395HepG2SUGP2
chr2033432553343330-intron-Distal3.444394.90436HepG2HLTF
chr2033027133302751-intron-Distal4.665928.86977HepG2EFTUD2
chr2033543173354384-intron-Distal3.005174.09021HepG2HNRNPL
chr2033856883385776-intron-Distal4.412324.31871HepG2HNRNPM
chr2033548743354934-intron-Distal,intron-Proximal4.8795518.21623HepG2U2AF2
chr2033481013348145-intron-Distal3.378763.34920HepG2HLTF
chr2033196463319754-intron-Distal3.881986.22361HepG2HLTF
chr2033725563372651-intron-Distal3.766353.18711HepG2ILF3
chr2032993543299437-intron-Distal3.107034.03067HepG2HNRNPC
chr2033281573328204-intron-Distal5.4104310.55162HepG2SUGP2
chr2033279143327943-intron-Distal3.783257.98306HepG2SUGP2
chr2033274153327476-intron-Distal3.6870013.31868HepG2SUGP2
chr2033275323327584-intron-Distal4.373324.28254HepG2MATR3
chr2033153913315473-intron-Distal3.756214.70379HepG2HLTF
chr2033271103327148-intron-Distal4.241359.55684HepG2SUGP2
chr2033276153327678-intron-Distal3.730679.14903HepG2SUGP2
chr2032974463297512-intron-Distal,intron-Proximal4.157713.98427HepG2SF3B4
chr2033280633328126-intron-Distal4.430989.06128HepG2SUGP2
chr2033268393326922-intron-Distal3.880574.28919HepG2KHSRP
chr2033548803354928-intron-Distal,intron-Proximal4.404495.65069K562U2AF2
chr2033244703324603-intron-Distal,intron-Proximal4.830006.58335HepG2QKI
chr2033274863327500-intron-Distal3.873546.25619HepG2SUGP2
chr2033273133327386-intron-Distal3.9001516.43658HepG2SUGP2
chr2033033533303401-intron-Distal,intron-Proximal4.040483.25678HepG2SF3B4
chr2033270453327091-intron-Distal5.6556612.60653HepG2SUGP2
chr2033063033306389-intron-Distal4.823894.79708HepG2U2AF2
chr2032868153286916-intron-Distal3.913163.29554HepG2GTF2F1
chr2033458353345924-intron-Distal3.756215.04128HepG2HLTF
chr2032908533290918-intron-Distal4.859728.88160HepG2PTBP1
chr2033242193324273-intron-Distal,intron-Proximal3.619369.75402HepG2EFTUD2
chr2033027513302782-intron-Distal,intron-Proximal4.6912813.69009HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C20orf194 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C20orf194 is not available on ENCORE database.

  • 66 RBPs can affect the levels of C20orf194.  








The Knockdown/knockout RNA-Seq assay for C20orf194 is not available on ENCORE database.





66 RBPs can affect the gene expression of C20orf194 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C20orf194ENSG00000088854.111756.370501308.591200.424507.686806.77600HepG2ACO1
C20orf194ENSG00000088854.112458.433801869.215300.395206.764905.76550HepG2AUH
C20orf194ENSG00000088854.111214.86390942.696900.365803.327302.49120HepG2CALR
C20orf194ENSG00000088854.111500.755801308.360500.197802.099001.50810HepG2CKAP4
C20orf194ENSG00000088854.111498.56830828.352700.8552012.4498011.10700HepG2CPSF6
C20orf194ENSG00000088854.11775.63190991.49800-0.354203.493702.34830HepG2YBX3
C20orf194ENSG00000088854.11753.74890573.987400.393002.420001.41120HepG2CSTF2
C20orf194ENSG00000088854.111201.87740936.577700.359703.169502.19010HepG2DDX24
C20orf194ENSG00000088854.111514.87360940.656000.687403.973902.81480HepG2DDX59
C20orf194ENSG00000088854.111672.281201254.213000.414902.869802.24170HepG2DDX6
C20orf194ENSG00000088854.111209.47790939.002300.365102.983001.96990HepG2DHX30
C20orf194ENSG00000088854.111279.43360973.558000.394104.701103.80500HepG2DNAJC21
C20orf194ENSG00000088854.111669.461401205.586300.469503.913403.21530HepG2EIF2S1
C20orf194ENSG00000088854.112038.217901297.249100.651805.161504.24140HepG2EIF4B
C20orf194ENSG00000088854.111669.147102146.09350-0.362605.262904.48060HepG2ETF1
C20orf194ENSG00000088854.112263.096601388.183000.705007.688206.47390HepG2FIP1L1
C20orf194ENSG00000088854.111021.44690825.791500.306702.089301.39830HepG2FUBP3
C20orf194ENSG00000088854.11933.56890709.176800.396502.578601.71920HepG2GEMIN5
C20orf194ENSG00000088854.111099.036601707.07410-0.635304.568903.14980HepG2GRSF1
C20orf194ENSG00000088854.111474.204901249.362500.238602.506301.57190HepG2HDGF
C20orf194ENSG00000088854.111023.539201559.77810-0.607804.430702.66350HepG2HNRNPA0
C20orf194ENSG00000088854.11887.232801093.28720-0.301302.014101.41210HepG2HNRNPC
C20orf194ENSG00000088854.111590.015501298.538300.292103.411002.62090HepG2HNRNPF
C20orf194ENSG00000088854.111182.86150896.102600.400402.912102.26870HepG2HNRNPLL
C20orf194ENSG00000088854.112272.848001267.520400.8424012.1835010.87870HepG2IGF2BP2
C20orf194ENSG00000088854.111243.86300839.187100.567702.460301.43430HepG2NONO
C20orf194ENSG00000088854.11899.320201202.05060-0.418605.534004.72270HepG2PCBP1
C20orf194ENSG00000088854.111317.965301127.094800.225602.108801.42550HepG2PRPF4
C20orf194ENSG00000088854.11933.67270704.772200.405702.468601.70400HepG2PRPF8
C20orf194ENSG00000088854.112497.626101223.157601.0298038.4984036.94360HepG2PTBP1
C20orf194ENSG00000088854.111834.507801486.668300.303205.022204.27140HepG2PUM1
C20orf194ENSG00000088854.112492.154601485.579000.7463015.9384014.41220HepG2PUM2
C20orf194ENSG00000088854.112027.799801332.892900.6053015.4893014.23900HepG2PUS1
C20orf194ENSG00000088854.112402.841401324.654100.8590021.5514020.04900HepG2QKI
C20orf194ENSG00000088854.112072.588601436.336600.528908.071206.71110HepG2RBM15
C20orf194ENSG00000088854.112296.742501793.740400.356504.918004.27690HepG2RBM22
C20orf194ENSG00000088854.111465.155701267.845000.208601.935101.40690HepG2RECQL
C20orf194ENSG00000088854.111379.487701852.12170-0.425002.563701.79330HepG2RPS3A
C20orf194ENSG00000088854.111432.015801127.883500.344305.266704.42800HepG2SMN1
C20orf194ENSG00000088854.111544.78450986.901200.646304.368903.37720HepG2SNRNP70
C20orf194ENSG00000088854.113757.048902025.969500.8909040.9541039.61800HepG2SRFBP1
C20orf194ENSG00000088854.111968.034301329.191800.5661012.5658011.71560HepG2SRSF1
C20orf194ENSG00000088854.111626.721501382.768700.234302.490301.89160HepG2SRSF5
C20orf194ENSG00000088854.111776.427301275.773400.477508.380507.28290HepG2SRSF7
C20orf194ENSG00000088854.111923.306201081.384800.8306026.1363024.76360HepG2SRSF9
C20orf194ENSG00000088854.111994.544801759.031300.181201.921301.47410HepG2SSB
C20orf194ENSG00000088854.111880.801701572.583300.258103.438902.75970HepG2SUCLG1
C20orf194ENSG00000088854.111154.62930937.445700.300502.306701.44250HepG2SUPT6H
C20orf194ENSG00000088854.111664.97440909.601200.872109.824708.67970HepG2SUPV3L1
C20orf194ENSG00000088854.111420.192801194.782600.249202.167601.66040HepG2TAF15
C20orf194ENSG00000088854.111532.333601097.786100.481006.050904.82080HepG2TIA1
C20orf194ENSG00000088854.112022.468501448.235400.481703.940302.93250HepG2UBE2L3
C20orf194ENSG00000088854.111502.428801305.840400.202201.964301.35930HepG2UPF1
C20orf194ENSG00000088854.111781.100401112.289600.6791018.7303017.25770HepG2ZC3H8
C20orf194ENSG00000088854.112203.287801436.174300.6173019.3946018.26940HepG2ZNF622
C20orf194ENSG00000088854.11218.24710143.813500.601702.641901.87410K562CPSF6
C20orf194ENSG00000088854.11241.65350146.366400.723303.550902.57760K562FMR1
C20orf194ENSG00000088854.11186.06010124.076000.584402.192401.38300K562FTO
C20orf194ENSG00000088854.11130.76900250.24370-0.936304.133103.41550K562FXR1
C20orf194ENSG00000088854.11163.02330228.19130-0.485202.277401.46580K562HNRNPU
C20orf194ENSG00000088854.11186.26260117.271500.667402.190001.37010K562KRR1
C20orf194ENSG00000088854.11183.81530304.18960-0.726705.104803.95600K562MAGOH
C20orf194ENSG00000088854.11190.92580270.64900-0.503402.255801.37660K562PCBP2
C20orf194ENSG00000088854.11196.14840295.54110-0.591403.657202.90500K562PTBP1
C20orf194ENSG00000088854.11281.11570410.62980-0.546702.098601.61310K562PUS1
C20orf194ENSG00000088854.11293.04280400.16320-0.449502.316701.76600K562RBM15
C20orf194ENSG00000088854.11195.87290283.37530-0.532802.775801.93450K562RBM22
C20orf194ENSG00000088854.11160.43330231.02520-0.526102.561101.74110K562SF3B4
C20orf194ENSG00000088854.11101.56200164.57600-0.696402.888302.04880K562SYNCRIP
C20orf194ENSG00000088854.11363.59560248.994800.546104.017103.16590K562UPF1
C20orf194ENSG00000088854.11329.15270233.435900.495602.422301.30660K562UTP3
C20orf194ENSG00000088854.11286.89970213.055000.429202.060001.30630K562WDR3
C20orf194ENSG00000088854.11451.15810308.151700.549903.978002.91080K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C20orf194 is not available on ENCORE database.





3 RBPs can affect the splicing of C20orf194 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC20orf194ENSG00000088854.11chr20-3288167328828732850863285190329567932957670.204000.000140.01565includedHepG2IGF2BP3
MXEC20orf194ENSG00000088854.11chr20-33243223324378332917133292703321150332128633401623340240-0.205000.004270.073832includedHepG2DDX55
MXEC20orf194ENSG00000088854.11chr20-32786753278822328508632851903276139327759632956793295767-0.329000.007740.043962includedHepG2U2AF2
MXEC20orf194ENSG00000088854.11chr20-33243223324378332917133292703321150332128633401623340240-0.213000.000540.004842includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C20orf194 is not avaliable on ENCORE database.