BEX4

General Information

Gene Name       : BEX4
Gene ID             : ENSG00000102409.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BEX4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BEX4ENSG00000102409.92.802.212.50ENCSR000AEF
HepG2BEX4ENSG00000102409.90.000.030.01ENCSR985KAT
K562BEX4ENSG00000102409.9259.41268.49263.95ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BEX4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • BEX4 RNA is bound by 22 proteins.  







eCLIP assay for BEX4 is not avaliable on ENCORE database.





22 proteins are bound to BEX4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX102471786102471834+3'-UTR4.8449211.00029K562IGF2BP1
chrX102472006102472065+3'-UTR4.754705.98620K562NOLC1
chrX102471731102471786+3'-UTR4.1497912.04805K562IGF2BP1
chrX102471818102471841+3'-UTR3.252723.86052K562YBX3
chrX102471505102471555+3'-UTR5.560806.23813HepG2SUB1
chrX102471939102471995+3'-UTR4.114655.73934K562IGF2BP2
chrX102471732102471814+3'-UTR3.9944310.84909K562TIA1
chrX102472009102472098+3'-UTR7.2316724.41026HepG2SUB1
chrX102471860102471897+3'-UTR3.9995812.34851K562PUM2
chrX102471511102471554+3'-UTR3.273684.11066K562NOLC1
chrX102471709102471785+3'-UTR4.72487400.00000K562PUM2
chrX102471841102471861+3'-UTR3.394527.44661K562YBX3
chrX102472041102472088+3'-UTR4.291993.08171K562APOBEC3C
chrX102472013102472092+3'-UTR4.5313155.52806K562PUM2
chrX102472001102472060+3'-UTR3.226494.51077K562IGF2BP1
chrX102470610102470627+5'-UTR,intron-Distal3.270654.80218K562UCHL5
chrX102470608102470677+5'-UTR,intron-Distal,intron-Proximal3.8144819.24244K562DDX3X
chrX102470144102470165+5'-UTR3.135986.35635K562UCHL5
chrX102470627102470659+5'-UTR,intron-Distal3.203358.23345K562UCHL5
chrX102470609102470688+5'-UTR,intron-Distal,intron-Proximal3.6453011.85827K562FTO
chrX102470102102470131+5'-UTR3.144704.68114K562DDX55
chrX102470165102470171+5'-UTR,intron-Proximal4.2115517.79008K562AQR
chrX102470090102470131+5'-UTR3.188265.73961K562GEMIN5
chrX102470152102470167+5'-UTR,intron-Proximal3.079385.56139K562DDX3X
chrX102470679102470689+5'-UTR,intron-Distal4.174036.95786K562UCHL5
chrX102470073102470149+5'-UTR4.3359923.11512K562DDX3X
chrX102470118102470144+5'-UTR3.031478.32709K562UCHL5
chrX102471178102471243+CDS3.4823614.06664K562UCHL5
chrX102470693102470726+intron-Distal,intron-Proximal4.566315.97994K562AQR
chrX102470539102470599+intron-Distal,intron-Proximal3.461814.28282K562EFTUD2
chrX102470692102470735+intron-Distal,intron-Proximal5.252916.83278K562PRPF8
chrX102470171102470239+intron-Proximal5.7500531.92720K562AQR
chrX102470193102470245+intron-Proximal4.993004.68673K562RBM22
chrX102470189102470247+intron-Proximal4.1891811.77494K562BUD13
chrX102470189102470243+intron-Proximal4.1831211.32195K562PRPF8
chrX102470193102470252+intron-Proximal5.122777.63242K562EFTUD2
chrX102470167102470252+intron-Proximal4.296486.67591K562SF3B4
chrX102470187102470249+intron-Proximal3.179137.58296K562GPKOW
chrX102470185102470250+intron-Proximal3.793425.99425K562CSTF2T
chrX102470194102470237+intron-Proximal3.247313.63681K562RBM15
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BEX4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BEX4 is not available on ENCORE database.

  • 65 RBPs can affect the levels of BEX4.  








The Knockdown/knockout RNA-Seq assay for BEX4 is not available on ENCORE database.





65 RBPs can affect the gene expression of BEX4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BEX4ENSG00000102409.99.426400.0000099999.999902.170301.69270HepG2AKAP1
BEX4ENSG00000102409.916.039801.364403.555203.123502.35860HepG2TARDBP
BEX4ENSG00000102409.94834.181105514.58220-0.190002.749602.18270K562AGGF1
BEX4ENSG00000102409.94763.101005738.09310-0.268702.500901.87940K562AKAP8L
BEX4ENSG00000102409.98440.848006776.069600.316803.545302.12300K562APOBEC3C
BEX4ENSG00000102409.92984.465905608.36530-0.9101020.3955018.97410K562AQR
BEX4ENSG00000102409.95294.612106590.48710-0.315904.219402.72520K562CCDC124
BEX4ENSG00000102409.92398.731502994.64350-0.320102.832901.53630K562CIRBP
BEX4ENSG00000102409.96608.280908439.75100-0.352907.236205.41590K562CPEB4
BEX4ENSG00000102409.97467.382108733.31490-0.225903.512202.79020K562DDX47
BEX4ENSG00000102409.91958.122802594.17380-0.405803.241501.40350K562DDX51
BEX4ENSG00000102409.93714.766202810.891300.402103.784802.18530K562DHX30
BEX4ENSG00000102409.95023.216806175.09860-0.297904.866803.65340K562DKC1
BEX4ENSG00000102409.94016.634202699.921100.573007.940905.77170K562DNAJC21
BEX4ENSG00000102409.93467.386704533.35520-0.386704.498403.60800K562EIF2S2
BEX4ENSG00000102409.9829.414502572.04470-1.6328034.3711030.99280K562EIF3D
BEX4ENSG00000102409.91827.991502861.09420-0.6463014.7461012.84900K562EIF3G
BEX4ENSG00000102409.91471.568202425.59450-0.7210011.9295010.18840K562EIF4A3
BEX4ENSG00000102409.91467.015802184.27450-0.5743010.859608.44380K562EIF4B
BEX4ENSG00000102409.92281.474303060.88850-0.424005.447303.11320K562FASTKD2
BEX4ENSG00000102409.95754.775807352.95870-0.353602.396401.59870K562FMR1
BEX4ENSG00000102409.91834.655802408.23350-0.392503.131501.60440K562GEMIN5
BEX4ENSG00000102409.94108.918205594.36320-0.445208.367306.47300K562GLRX3
BEX4ENSG00000102409.93019.515203657.86390-0.276702.741901.67380K562HNRNPA1
BEX4ENSG00000102409.93364.977004192.70540-0.317301.919301.41050K562HNRNPC
BEX4ENSG00000102409.92221.950003743.33690-0.752507.554305.59730K562HNRNPF
BEX4ENSG00000102409.93831.360602790.680500.457104.622902.99240K562HNRNPK
BEX4ENSG00000102409.96376.410807892.47400-0.307703.427002.23420K562HNRNPL
BEX4ENSG00000102409.92097.368702794.03800-0.413803.076601.97390K562IGF2BP2
BEX4ENSG00000102409.95153.391806089.83010-0.240902.468801.69480K562KIF1C
BEX4ENSG00000102409.92150.053202936.51620-0.449705.709504.48910K562MAGOH
BEX4ENSG00000102409.94782.224005829.23950-0.285602.938101.82250K562MAK16
BEX4ENSG00000102409.910234.384908185.359000.322203.525502.25060K562MSI2
BEX4ENSG00000102409.94458.552405881.71490-0.3997010.497109.02820K562MTPAP
BEX4ENSG00000102409.95250.862806535.27350-0.3157011.120109.76250K562NSUN2
BEX4ENSG00000102409.91708.424002644.20320-0.630206.664903.91310K562PABPC4
BEX4ENSG00000102409.94044.871808378.34220-1.050602.452401.53450K562PABPN1
BEX4ENSG00000102409.92374.296702870.39260-0.273702.670101.34720K562PCBP1
BEX4ENSG00000102409.92772.871503388.67870-0.289303.208302.34160K562POLR2G
BEX4ENSG00000102409.91746.904802853.00250-0.7077013.8701012.44390K562PTBP1
BEX4ENSG00000102409.910450.424608911.664900.229702.553601.53030K562PUM1
BEX4ENSG00000102409.92269.958702798.91490-0.302203.367701.36950K562QKI
BEX4ENSG00000102409.94080.207905544.72900-0.442508.620907.60030K562RBM15
BEX4ENSG00000102409.91643.782402735.73910-0.7349011.9879010.06050K562RBM22
BEX4ENSG00000102409.91994.992502817.76640-0.4982012.576109.55680K562RPS10
BEX4ENSG00000102409.91802.463402381.10900-0.401702.815901.99240K562RPS19
BEX4ENSG00000102409.96992.6072010274.30240-0.555103.423201.68870K562SBDS
BEX4ENSG00000102409.93001.679707665.77060-1.352703.080701.78880K562SF1
BEX4ENSG00000102409.94966.707306561.71010-0.401802.284701.40990K562SF3B1
BEX4ENSG00000102409.91737.314602600.99340-0.582207.904506.41480K562SF3B4
BEX4ENSG00000102409.95856.214006606.51280-0.173902.974902.01100K562SRPK2
BEX4ENSG00000102409.94095.762502796.883300.550209.433008.13760K562SRSF1
BEX4ENSG00000102409.92026.368402641.42000-0.382403.670602.42870K562SRSF5
BEX4ENSG00000102409.92396.506202951.22110-0.300402.801301.51430K562SSB
BEX4ENSG00000102409.91666.656202263.38870-0.441503.534902.37210K562SUPV3L1
BEX4ENSG00000102409.92183.459902830.65070-0.374503.346702.56700K562TARDBP
BEX4ENSG00000102409.92706.259403615.64200-0.418002.531401.64030K562TIAL1
BEX4ENSG00000102409.91854.146403840.02380-1.0504012.7745010.42590K562TRIM56
BEX4ENSG00000102409.91862.087602424.90380-0.381002.747801.65900K562U2AF1
BEX4ENSG00000102409.91672.389802503.90930-0.582309.587608.08910K562U2AF2
BEX4ENSG00000102409.93205.100502395.425900.420004.151802.88070K562UCHL5
BEX4ENSG00000102409.94989.071506929.47640-0.4740014.5117013.02000K562UPF1
BEX4ENSG00000102409.93955.982005890.05910-0.574206.312904.52740K562UTP3
BEX4ENSG00000102409.93996.740705929.35480-0.5691010.329408.59900K562WDR3
BEX4ENSG00000102409.94967.756806165.69890-0.311707.349406.03190K562WDR43
BEX4ENSG00000102409.94356.155706318.27300-0.536508.174006.56590K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BEX4 is not available on ENCORE database.





24 RBPs can affect the splicing of BEX4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.057000.000030.04786excludedK562RPS3
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.066000.000010.00253excludedK562FTO
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.165000.000000.00010excludedK562SF3B4
SEBEX4ENSG00000102409.9chrX+102470582102470692102470051102470166102471076102472174-0.070000.000010.00059excludedK562AKAP8L
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.065000.000020.00372excludedK562FMR1
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.108000.000000.00000excludedK562AQR
SEBEX4ENSG00000102409.9chrX+102470582102470692102470051102470166102471076102472174-0.085000.000070.02154excludedK562HNRNPA1
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.083000.000040.00651excludedK562SUPV3L1
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.080000.000000.00000excludedK562PUS1
SEBEX4ENSG00000102409.9chrX+102470582102470692102470051102470166102471076102472174-0.060000.000240.04983excludedK562MTPAP
SEBEX4ENSG00000102409.9chrX+102470582102470692102470051102470166102471076102472174-0.085000.000000.00039excludedK562NSUN2
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.058000.001770.07737excludedK562EFTUD2
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.082000.000000.02095excludedK562SND1
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.131000.000130.00414excludedK562U2AF1
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.115000.000000.00000excludedK562HNRNPL
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.119000.000000.00000excludedK562SRSF7
SEBEX4ENSG00000102409.9chrX+102470582102470692102470051102470166102471076102472174-0.085000.000010.00054excludedK562UTP18
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.364000.000000.00000excludedK562U2AF2
SEBEX4ENSG00000102409.9chrX+102470582102470692102470051102470166102471076102472174-0.081000.003390.09346excludedK562TARDBP
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.078000.000000.00000excludedK562HNRNPU
SEBEX4ENSG00000102409.9chrX+102470582102470692102470051102470166102471076102472174-0.084000.000000.00006excludedK562RBM15
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.145000.000000.00000excludedK562SF3B1
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.052000.000480.07685excludedK562EIF3G
SEBEX4ENSG00000102409.9chrX+102470609102470692102470019102470166102471076102472174-0.137000.000000.00000excludedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BEX4 is not avaliable on ENCORE database.