ANKRD36C

General Information

Gene Name       : ANKRD36C
Gene ID             : ENSG00000174501.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ANKRD36C)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ANKRD36CENSG00000174501.148.148.608.37ENCSR000AEF
HepG2ANKRD36CENSG00000174501.144.585.004.79ENCSR985KAT
K562ANKRD36CENSG00000174501.144.814.904.86ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ANKRD36C is not avaliable on ENCORE database.



Proteins bound to RNA
  • ANKRD36C RNA is bound by 16 proteins.  







eCLIP assay for ANKRD36C is not avaliable on ENCORE database.





16 proteins are bound to ANKRD36C RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr29655555296555618-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.457765.59408HepG2GRWD1
chr29654617896546227-3'-UTR,CDS,intron-Distal,intron-Proximal4.204307.09561HepG2BCLAF1
chr29654805296548082-3'-UTR,CDS,intron-Distal,intron-Proximal4.611845.23259HepG2BCLAF1
chr29652573696525766-3'-UTR,CDS,intron-Distal,intron-Proximal4.480334.37348HepG2BCLAF1
chr29655571596555740-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.355445.79432HepG2BCLAF1
chr29655554696555617-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.617146.55026K562ZNF622
chr29655384096553868-3'-UTR,CDS,intron-Distal,intron-Proximal3.788643.38114HepG2GRWD1
chr29655179896551839-3'-UTR,CDS,intron-Distal,intron-Proximal4.205183.82843HepG2PPIG
chr29655757996557596-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.015933.49332HepG2PPIG
chr29655179396551847-3'-UTR,CDS,intron-Distal,intron-Proximal3.076283.17744HepG2GRWD1
chr29655179896551845-3'-UTR,CDS,intron-Distal,intron-Proximal3.335675.35144K562ZNF622
chr29655745696557486-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.347414.50440HepG2PPIG
chr29655555096555607-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.175418.94445HepG2BCLAF1
chr29655179596551829-3'-UTR,CDS,intron-Distal,intron-Proximal3.844364.76554HepG2BCLAF1
chr29655383996553870-3'-UTR,CDS,intron-Distal,intron-Proximal3.009633.55138K562ZNF622
chr29655554696555581-3'-UTR,CDS,intron-Distal,intron-Proximal3.170813.17151K562UCHL5
chr29657985596579895-5'-UTR,CDS,intron-Distal,intron-Proximal5.326268.86847HepG2BCLAF1
chr29657050896570537-5'-UTR,CDS,intron-Distal,intron-Proximal4.627123.79199HepG2PPIG
chr29657437196574442-5'-UTR,CDS,intron-Distal,intron-Proximal4.922486.48028K562PRPF8
chr29658360896583643-5'-UTR,CDS,intron-Distal,intron-Proximal4.073673.79199HepG2PPIG
chr29656873896568840-5'-UTR,intron-Distal,intron-Proximal4.928257.04874K562EFTUD2
chr29657051496570539-5'-UTR,CDS,intron-Distal,intron-Proximal3.526883.87469HepG2BCLAF1
chr29658940696589449-5'-UTR,CDS,intron-Distal,intron-Proximal5.104396.40247K562SF3B4
chr29658925396589268-5'-UTR,CDS,intron-Distal,intron-Proximal4.130113.38968HepG2BCLAF1
chr29657050896570544-5'-UTR,CDS,intron-Distal,intron-Proximal3.381554.06757K562UCHL5
chr29659110296591135-5'-UTR,CDS,intron-Distal,intron-Proximal3.903393.16051HepG2PPIG
chr29665739996657470-5'-UTR,CDS,intron-Distal4.003063.38114HepG2GRWD1
chr29656880696568829-5'-UTR,intron-Distal,intron-Proximal3.898693.59112HepG2PPIG
chr29656879896568866-5'-UTR,intron-Distal,intron-Proximal5.281216.40247K562SF3B4
chr29656877696568838-5'-UTR,intron-Distal,intron-Proximal4.025966.81564HepG2PRPF8
chr29658940896589437-5'-UTR,CDS,intron-Distal,intron-Proximal3.395613.66187K562ZNF622
chr29657985596579898-5'-UTR,CDS,intron-Distal,intron-Proximal4.744235.14565K562UCHL5
chr29665747096657532-5'-UTR,intron-Distal3.139043.41665HepG2GRWD1
chr29658000996580089-5'-UTR,CDS,intron-Distal,intron-Proximal3.673494.13013K562SF3B4
chr29665748096657530-5'-UTR,intron-Distal4.152337.48753K562ZNF622
chr29657437396574459-5'-UTR,CDS,intron-Distal,intron-Proximal4.727076.46853K562EFTUD2
chr29661086096610879-CDS,intron-Distal,intron-Proximal3.957784.93978HepG2BCLAF1
chr29652163496521658-CDS,intron-Distal,intron-Proximal3.857873.11168K562ZNF622
chr29664808496648111-CDS,intron-Distal,intron-Proximal4.566135.10960K562ZNF622
chr29662253396622545-CDS,intron-Distal,intron-Proximal5.134606.37937HepG2BCLAF1
chr29662450496624530-CDS,intron-Distal,intron-Proximal5.026884.70478HepG2BCLAF1
chr29661038596610442-CDS,intron-Distal5.475699.78571HepG2BCLAF1
chr29661970996619754-CDS,intron-Distal,intron-Proximal3.660035.26861K562DDX24
chr29664386996643938-CDS,intron-Distal,intron-Proximal3.865745.21950K562DDX24
chr29662438496624411-CDS,intron-Distal,intron-Proximal3.957784.46864HepG2BCLAF1
chr29664387496643919-CDS,intron-Distal3.957163.18234K562BUD13
chr29652164496521738-CDS,intron-Distal,intron-Proximal4.8187811.54096HepG2BCLAF1
chr29662450496624519-CDS,intron-Distal,intron-Proximal4.275883.43980K562ZNF622
chr29652162696521718-CDS,intron-Distal,intron-Proximal3.139043.41665HepG2GRWD1
chr29665731496657377-CDS,intron-Distal3.322804.25541HepG2GRWD1
chr29662450496624528-CDS,intron-Distal,intron-Proximal3.698833.12746HepG2GRWD1
chr29661038496610443-CDS,intron-Distal,intron-Proximal3.041144.79309K562ZNF622
chr29652109496521161-CDS,intron-Distal3.147928.02162HepG2BCLAF1
chr29652141396521486-CDS,intron-Distal4.332213.82973HepG2HLTF
chr29661086096610907-CDS,intron-Distal,intron-Proximal4.720986.36164K562DDX24
chr29652173896521790-CDS,intron-Distal,intron-Proximal4.130116.23296HepG2BCLAF1
chr29662254296622562-CDS,intron-Distal4.094593.43980K562ZNF622
chr29661971196619770-CDS,intron-Distal,intron-Proximal3.560877.91906K562BUD13
chr29661650396616528-CDS,intron-Distal,intron-Proximal3.960776.39364HepG2PPIG
chr29662253396622563-CDS,intron-Distal,intron-Proximal4.978935.87377HepG2PPIG
chr29661428596614343-CDS,intron-Distal3.787664.44630K562ZNF622
chr29661709596617116-CDS,intron-Distal,intron-Proximal3.437704.13746HepG2PPIG
chr29661649696616503-CDS,intron-Distal,intron-Proximal4.509895.18660HepG2PPIG
chr29662252996622553-CDS,intron-Distal,intron-Proximal4.037055.20093K562DDX24
chr29661086096610900-CDS,intron-Distal,intron-Proximal3.802113.95301K562ZNF622
chr29665249696652546-CDS,intron-Distal,intron-Proximal5.097818.05035K562ZNF622
chr29661086896610920-CDS,intron-Distal,intron-Proximal3.192203.01994K562BUD13
chr29661038096610443-CDS,intron-Distal,intron-Proximal6.2744410.14153K562DDX24
chr29661971596619755-CDS,intron-Distal,intron-Proximal3.948826.97808HepG2BCLAF1
chr29664800396648040-CDS,intron-Distal,intron-Proximal5.067346.71715HepG2BCLAF1
chr29661039096610436-CDS,intron-Distal3.214553.43213K562UCHL5
chr29662826596628294-CDS,intron-Distal,intron-Proximal5.176485.34688K562DDX24
chr29662438396624411-CDS,intron-Distal,intron-Proximal3.522403.90826K562ZNF622
chr29661038896610436-CDS,intron-Distal4.600894.50440HepG2PPIG
chr29662802596628102-CDS,intron-Distal,intron-Proximal5.344188.34710K562AQR
chr29664639996646452-CDS,intron-Distal3.275916.86395HepG2BCLAF1
chr29661427996614345-CDS,intron-Distal,intron-Proximal5.4204615.94237HepG2PPIG
chr29662438496624412-CDS,intron-Distal,intron-Proximal3.760343.34184HepG2GRWD1
chr29661970896619754-CDS,intron-Distal,intron-Proximal4.6911810.78601HepG2PPIG
chr29660450196604547-intron-Distal3.311175.34873K562KHSRP
chr29660489196604953-intron-Distal3.665396.01927K562KHSRP
chr29660436696604418-intron-Distal3.038093.07751K562KHSRP
chr29652805396528141-intron-Distal3.288733.14999K562EXOSC5
chr29660409096604168-intron-Distal3.676605.78005K562KHSRP
chr29651599996516086-intron-Distal4.1930714.24414K562KHSRP
chr29665685096656912-intron-Distal4.445395.47365K562RBFOX2
chr29651831896518421-intron-Distal4.398245.91698K562KHSRP
chr29652851596528631-intron-Distal3.058033.00129HepG2SUGP2
chr29660290696602977-intron-Distal4.082494.02395HepG2KHSRP
chr29660416896604242-intron-Distal3.301914.10408K562KHSRP
chr29652433996524484-intron-Distal3.923783.71397K562KHSRP
chr29651608696516142-intron-Distal3.896146.48117K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ANKRD36C is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ANKRD36C is not available on ENCORE database.

  • 76 RBPs can affect the levels of ANKRD36C.  








The Knockdown/knockout RNA-Seq assay for ANKRD36C is not available on ENCORE database.





76 RBPs can affect the gene expression of ANKRD36C :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ANKRD36CENSG00000174501.1062.45900168.53460-1.432106.207904.78000HepG2BCCIP
ANKRD36CENSG00000174501.10133.81850270.30130-1.014305.425604.62170HepG2BOP1
ANKRD36CENSG00000174501.10162.68190348.87340-1.100603.943603.17670HepG2CKAP4
ANKRD36CENSG00000174501.1054.36830124.60200-1.196502.433501.84310HepG2DDX3X
ANKRD36CENSG00000174501.10247.31590165.690100.577802.521301.77850HepG2DDX55
ANKRD36CENSG00000174501.10135.24080191.32250-0.500502.107701.48550HepG2DNAJC21
ANKRD36CENSG00000174501.10303.66620205.897300.560502.447901.41150HepG2AGO1
ANKRD36CENSG00000174501.10262.15370113.746901.204506.535105.55120HepG2EIF4A3
ANKRD36CENSG00000174501.10173.68830340.97350-0.973203.449402.51430HepG2EWSR1
ANKRD36CENSG00000174501.10197.17950320.58190-0.701203.565802.69900HepG2FIP1L1
ANKRD36CENSG00000174501.10192.03810100.207700.938304.632403.63120HepG2FUBP3
ANKRD36CENSG00000174501.10160.84910106.422800.595801.986201.41860HepG2G3BP1
ANKRD36CENSG00000174501.10301.96430112.914201.419109.504507.85060HepG2G3BP2
ANKRD36CENSG00000174501.10286.19950101.462401.496002.641301.68210HepG2IGF2BP3
ANKRD36CENSG00000174501.10292.82550108.791201.4284010.003208.00920HepG2KHSRP
ANKRD36CENSG00000174501.10251.29230114.707601.131307.172406.13210HepG2MAGOH
ANKRD36CENSG00000174501.10357.01140259.519400.460002.489201.72030HepG2MSI2
ANKRD36CENSG00000174501.10197.12090111.963100.816001.849201.38440HepG2PTBP1
ANKRD36CENSG00000174501.10276.69100184.510200.584502.689802.10320HepG2PUM1
ANKRD36CENSG00000174501.10309.13360184.391700.745404.468503.62730HepG2PUM2
ANKRD36CENSG00000174501.10261.70990121.216401.110308.444807.44360HepG2QKI
ANKRD36CENSG00000174501.10180.28020270.91850-0.587603.236602.68810HepG2RBM22
ANKRD36CENSG00000174501.10261.34830110.027701.2480010.121608.89180HepG2RBM25
ANKRD36CENSG00000174501.10133.04060247.92270-0.898003.583702.37670HepG2RCC2
ANKRD36CENSG00000174501.10233.59260124.587600.906705.776505.04020HepG2NELFE
ANKRD36CENSG00000174501.10279.68580116.066401.2688011.6499010.51710HepG2RECQL
ANKRD36CENSG00000174501.10140.33900218.68050-0.639902.378401.80430HepG2RPS19
ANKRD36CENSG00000174501.10179.21370449.78830-1.327604.069903.24490HepG2SF3A3
ANKRD36CENSG00000174501.10271.55630116.532401.220405.409604.62950HepG2SF3B4
ANKRD36CENSG00000174501.10425.42340166.629701.3522019.2479017.71260HepG2SLBP
ANKRD36CENSG00000174501.10470.64830305.983000.621105.665205.01920HepG2SRFBP1
ANKRD36CENSG00000174501.10218.98150121.649100.848004.970404.38420HepG2SRSF1
ANKRD36CENSG00000174501.10305.60100171.608100.832403.066202.41130HepG2SRSF5
ANKRD36CENSG00000174501.10197.8184098.980600.998903.487802.88380HepG2SRSF9
ANKRD36CENSG00000174501.10362.79350221.383600.712503.097701.82030HepG2SUB1
ANKRD36CENSG00000174501.10400.26440195.192401.0360011.1342010.02980HepG2SUCLG1
ANKRD36CENSG00000174501.10305.45540109.383301.481507.785606.92210HepG2TAF15
ANKRD36CENSG00000174501.10168.57540261.70730-0.634602.484501.79160HepG2TARDBP
ANKRD36CENSG00000174501.10184.90510100.465600.880004.922803.81820HepG2TIA1
ANKRD36CENSG00000174501.10144.62940209.23180-0.532702.703802.14420HepG2TRIM56
ANKRD36CENSG00000174501.10323.14280169.789400.928302.653101.79880HepG2TUFM
ANKRD36CENSG00000174501.10377.24070179.691501.069902.707301.87900HepG2UBE2L3
ANKRD36CENSG00000174501.1057.1753097.46510-0.769501.947901.31110HepG2UCHL5
ANKRD36CENSG00000174501.10278.18060398.89390-0.520004.111703.28630HepG2UPF1
ANKRD36CENSG00000174501.10230.40450385.11570-0.741106.655405.79480HepG2UTP3
ANKRD36CENSG00000174501.10469.80160232.878901.012406.852504.89410HepG2XRCC5
ANKRD36CENSG00000174501.1076.32390162.38880-1.089203.992203.12930HepG2XRN2
ANKRD36CENSG00000174501.10297.51690164.732600.852707.107306.11100HepG2ZC3H8
ANKRD36CENSG00000174501.10275.38110438.70630-0.671807.048106.28000HepG2ZNF622
ANKRD36CENSG00000174501.10364.86570236.604200.624803.166301.77120HepG2ZRANB2
ANKRD36CENSG00000174501.10183.78890336.53590-0.872706.901005.17770K562AKAP8
ANKRD36CENSG00000174501.10233.04710319.23560-0.454001.918201.41270K562AQR
ANKRD36CENSG00000174501.10175.60270366.05730-1.0598010.648908.33460K562CCDC124
ANKRD36CENSG00000174501.10212.34370342.99180-0.691804.125503.02680K562DKC1
ANKRD36CENSG00000174501.10111.90620185.26470-0.727302.261201.43650K562EFTUD2
ANKRD36CENSG00000174501.10153.27960296.06540-0.949806.853905.46940K562FIP1L1
ANKRD36CENSG00000174501.10294.45040204.653700.524702.781001.34400K562G3BP1
ANKRD36CENSG00000174501.10361.86000269.067100.427402.568801.47120K562GLRX3
ANKRD36CENSG00000174501.10299.39620414.31960-0.468702.399101.69290K562GRSF1
ANKRD36CENSG00000174501.10416.21770243.665000.772303.913502.63960K562HNRNPA1
ANKRD36CENSG00000174501.10364.45130211.753300.783205.566404.74900K562HNRNPC
ANKRD36CENSG00000174501.10148.63420243.50280-0.712202.289501.44650K562HNRNPM
ANKRD36CENSG00000174501.10366.60440269.801500.442202.528901.67410K562HNRNPU
ANKRD36CENSG00000174501.10254.62930401.42320-0.656704.428603.42780K562HSPD1
ANKRD36CENSG00000174501.10319.20530224.521500.507502.897201.95100K562MATR3
ANKRD36CENSG00000174501.10264.39240378.91900-0.519203.476902.43990K562MBNL1
ANKRD36CENSG00000174501.10544.99540705.36750-0.372102.338101.30460K562MSI2
ANKRD36CENSG00000174501.10437.81960282.893200.630005.646104.51750K562MTPAP
ANKRD36CENSG00000174501.10100.96970182.40130-0.853203.553002.04480K562NONO
ANKRD36CENSG00000174501.10410.54280314.296000.385302.587601.86260K562NSUN2
ANKRD36CENSG00000174501.10101.36730194.35500-0.939104.364702.00790K562PA2G4
ANKRD36CENSG00000174501.10434.76130243.228800.837805.996504.76850K562PCBP3
ANKRD36CENSG00000174501.10349.87120186.578000.906905.448004.32460K562POLR2G
ANKRD36CENSG00000174501.10188.72930336.07080-0.832406.157004.85200K562PPIG
ANKRD36CENSG00000174501.1074.39150180.28230-1.277004.800703.81680K562PRPF8
ANKRD36CENSG00000174501.10562.00050316.117200.830007.017106.19810K562PUS1
ANKRD36CENSG00000174501.1087.44340173.25390-0.986504.729003.42920K562RCC2
ANKRD36CENSG00000174501.1093.00990183.68080-0.981704.227303.21370K562RPS19
ANKRD36CENSG00000174501.10394.42980310.165200.346602.044101.33560K562SF3A3
ANKRD36CENSG00000174501.10183.98910284.58440-0.629203.453402.49390K562SF3B4
ANKRD36CENSG00000174501.10618.14160388.479000.670005.389503.44890K562SSRP1
ANKRD36CENSG00000174501.10139.47940209.18520-0.584702.638901.84040K562TIA1
ANKRD36CENSG00000174501.10203.33970273.96350-0.430102.042901.35390K562U2AF2
ANKRD36CENSG00000174501.10436.54630333.256600.389402.612501.91480K562UPF1
ANKRD36CENSG00000174501.10414.86470285.154100.540803.752302.73250K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ANKRD36C is not available on ENCORE database.





5 RBPs can affect the splicing of ANKRD36C :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEANKRD36CENSG00000174501.10chr2-966045769660464996601363966013929660473496604763-0.378000.003980.06213excludedK562SF3B4
SEANKRD36CENSG00000174501.10chr2-966045769660464996601363966013929660473496604763-0.243000.001490.01979excludedHepG2U2AF2
SEANKRD36CENSG00000174501.10chr2-966045769660464996601363966013929660473496604763-0.369000.000190.03659excludedHepG2HNRNPA1
SEANKRD36CENSG00000174501.10chr2-966045769660464996601363966013929660473496604763-0.391000.003840.06669excludedK562U2AF1
SEANKRD36CENSG00000174501.10chr2-966045769660464996601363966013929660473496604763-0.405000.000240.00596excludedK562U2AF2
SEANKRD36CENSG00000174501.10chr2-966045769660464996601363966013929660473496604763-0.344000.001230.05023excludedHepG2HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ANKRD36C is not avaliable on ENCORE database.