ACER3

General Information

Gene Name       : ACER3
Gene ID             : ENSG00000078124.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ACER3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ACER3ENSG00000078124.118.747.478.11ENCSR000AEF
HepG2ACER3ENSG00000078124.115.326.115.71ENCSR985KAT
K562ACER3ENSG00000078124.115.897.626.75ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ACER3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ACER3 RNA is bound by 9 proteins.  







eCLIP assay for ACER3 is not avaliable on ENCORE database.





9 proteins are bound to ACER3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr117672604276726101+3'-UTR,CDS,intron-Proximal4.155994.90467K562U2AF2
chr117672768776727774+3'-UTR,CDS,intron-Proximal3.078633.04045K562U2AF2
chr117673081776730931+3'-UTR,CDS,intron-Distal,intron-Proximal4.8888911.03354K562AQR
chr117657194076572124+5'-UTR,CDS,intron-Proximal4.477994.26442K562DDX3X
chr117657198176572097+5'-UTR,CDS5.455493.85934HepG2DDX3X
chr117665369776653744+intron-Distal4.960467.38693K562EXOSC5
chr117659445676594464+intron-Distal5.7890523.81672HepG2WDR43
chr117659444276594456+intron-Distal4.391977.79688HepG2DDX52
chr117665461576654634+intron-Distal4.315353.01456K562EXOSC5
chr117665377176653817+intron-Distal4.6468410.61709K562EXOSC5
chr117665624976656312+intron-Distal4.7934611.90352K562EXOSC5
chr117664066576640724+intron-Distal4.431025.12361K562EXOSC5
chr117665395376654019+intron-Distal5.042216.08869K562EXOSC5
chr117659445676594464+intron-Distal4.391977.79688HepG2DDX52
chr117665321476653249+intron-Distal4.014993.30687K562EXOSC5
chr117665311176653169+intron-Distal4.752596.41304K562EXOSC5
chr117657234376572467+intron-Distal3.932093.59342K562CSTF2T
chr117659444276594456+intron-Distal5.7890523.81672HepG2WDR43
chr117665381776653865+intron-Distal4.416978.21369K562EXOSC5
chr117665386576653921+intron-Distal4.323158.21369K562EXOSC5
chr117659444176594455+intron-Distal6.6674426.75525HepG2UTP18
chr117665625876656309+intron-Distal4.687195.31505K562HNRNPM
chr117659445576594463+intron-Distal6.6674426.75525HepG2UTP18
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ACER3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ACER3 is not available on ENCORE database.

  • 72 RBPs can affect the levels of ACER3.  








The Knockdown/knockout RNA-Seq assay for ACER3 is not available on ENCORE database.





72 RBPs can affect the gene expression of ACER3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ACER3ENSG00000078124.7424.08720240.592800.817709.007708.03910HepG2ACO1
ACER3ENSG00000078124.7648.66450265.767601.2872013.3207012.24530HepG2AKAP1
ACER3ENSG00000078124.7225.23100380.36460-0.756005.237304.44560HepG2BOP1
ACER3ENSG00000078124.7155.88840240.55610-0.625903.789303.03310HepG2CKAP4
ACER3ENSG00000078124.7181.65920349.20610-0.942802.984302.27330HepG2CPSF6
ACER3ENSG00000078124.7217.31700320.47520-0.560404.227103.34140HepG2DAZAP1
ACER3ENSG00000078124.7545.92800254.608201.1003010.724909.57040HepG2DDX3X
ACER3ENSG00000078124.7349.00280218.659800.674503.567502.87400HepG2DDX6
ACER3ENSG00000078124.7159.70900231.07420-0.532902.378001.46900HepG2DHX30
ACER3ENSG00000078124.7171.49580239.58350-0.482402.313701.66460HepG2DNAJC21
ACER3ENSG00000078124.7110.96830237.45130-1.097509.429608.31180HepG2DNAJC2
ACER3ENSG00000078124.7188.00270302.83730-0.687804.127703.14300HepG2EIF4G2
ACER3ENSG00000078124.7505.94150292.007700.792905.010304.00300HepG2FIP1L1
ACER3ENSG00000078124.7302.74990217.469900.477202.093301.51100HepG2G3BP1
ACER3ENSG00000078124.7169.96230241.87860-0.509102.143601.56820HepG2HNRNPA1
ACER3ENSG00000078124.7148.00070269.03970-0.862204.974204.06460HepG2HNRNPC
ACER3ENSG00000078124.7222.07720321.38700-0.533303.568902.76250HepG2HNRNPF
ACER3ENSG00000078124.7172.34450291.94280-0.760406.059905.09620HepG2HNRNPL
ACER3ENSG00000078124.7180.91600377.79460-1.062308.299907.27300HepG2HNRNPLL
ACER3ENSG00000078124.7204.01860316.47350-0.633404.250703.36960HepG2IGF2BP1
ACER3ENSG00000078124.7173.20900272.99960-0.656404.940903.98340HepG2ILF2
ACER3ENSG00000078124.7354.87150234.468900.597803.187702.48410HepG2MAGOH
ACER3ENSG00000078124.7432.76130236.349400.872607.650006.36840HepG2MSI2
ACER3ENSG00000078124.7231.59690334.96580-0.532402.385001.68880HepG2NSUN2
ACER3ENSG00000078124.7166.87990238.37680-0.514402.605901.88920HepG2PPIL4
ACER3ENSG00000078124.7451.55860303.335700.573903.813003.12590HepG2PUF60
ACER3ENSG00000078124.7171.45950245.06170-0.515302.767202.15120HepG2PUS1
ACER3ENSG00000078124.7690.73870270.500501.3524010.729509.40620HepG2RAVER1
ACER3ENSG00000078124.7684.35190358.787900.9315013.1688012.20610HepG2RBM22
ACER3ENSG00000078124.7353.19720246.302000.519903.000602.30240HepG2RBM25
ACER3ENSG00000078124.7433.66930278.877500.636905.111504.41280HepG2NELFE
ACER3ENSG00000078124.7212.03290346.22700-0.707404.540303.69420HepG2RPLP0
ACER3ENSG00000078124.7160.13530238.01130-0.571703.149502.47140HepG2SAFB2
ACER3ENSG00000078124.7514.11680312.159200.719704.267903.42010HepG2SF3A3
ACER3ENSG00000078124.7214.10410290.81990-0.441802.566801.88770HepG2SLBP
ACER3ENSG00000078124.7177.86080276.01870-0.634002.885301.90660HepG2SMNDC1
ACER3ENSG00000078124.7558.70000272.312801.0367014.1498013.25820HepG2SRSF1
ACER3ENSG00000078124.7362.31950271.407700.416701.909501.33320HepG2SUPV3L1
ACER3ENSG00000078124.7404.76620244.776100.725506.303505.51570HepG2TAF15
ACER3ENSG00000078124.7226.41160368.15480-0.701404.414403.52600HepG2TARDBP
ACER3ENSG00000078124.7185.99750259.71510-0.481602.341301.87360HepG2TIAL1
ACER3ENSG00000078124.7161.11440262.01450-0.701604.983804.27160HepG2TRIM56
ACER3ENSG00000078124.7450.09590249.803600.849303.893403.15270HepG2U2AF1
ACER3ENSG00000078124.7366.08490267.275900.453702.720502.12740HepG2UTP3
ACER3ENSG00000078124.7165.84160267.17050-0.688002.783602.05680HepG2XRN2
ACER3ENSG00000078124.7424.27050304.468400.478603.926103.30540HepG2ZNF622
ACER3ENSG00000078124.7831.22160604.391500.459603.237502.29190K562BOP1
ACER3ENSG00000078124.7985.16820671.610800.552602.769601.70660K562CNOT7
ACER3ENSG00000078124.7475.52460642.59670-0.434403.141302.30450K562CPSF6
ACER3ENSG00000078124.71574.196201292.314300.284602.524001.59310K562CELF1
ACER3ENSG00000078124.71096.19570912.213300.265002.483801.86130K562DDX47
ACER3ENSG00000078124.7506.39480267.826200.918903.459802.32430K562EIF3A
ACER3ENSG00000078124.7677.64020480.969400.494503.037501.95230K562EIF3D
ACER3ENSG00000078124.7718.59220563.855600.349702.250401.50810K562EIF4A3
ACER3ENSG00000078124.7360.18670492.18440-0.450503.080201.69850K562EWSR1
ACER3ENSG00000078124.7571.47910390.789600.548203.627702.31040K562FKBP4
ACER3ENSG00000078124.71115.31030653.913700.770209.300507.68220K562FMR1
ACER3ENSG00000078124.7809.74890554.288500.546704.145703.00630K562FTO
ACER3ENSG00000078124.7886.28940613.200600.531303.334702.54490K562G3BP2
ACER3ENSG00000078124.7715.84050552.302000.374103.069401.86640K562GLRX3
ACER3ENSG00000078124.7785.84840450.133300.803809.567408.51120K562HNRNPC
ACER3ENSG00000078124.7437.55270600.87840-0.457602.612501.71050K562HNRNPM
ACER3ENSG00000078124.7853.39420598.845800.510904.586103.43740K562METAP2
ACER3ENSG00000078124.7798.82110580.671000.460103.139402.27900K562MTPAP
ACER3ENSG00000078124.7815.40000645.191600.337703.494002.66510K562NSUN2
ACER3ENSG00000078124.7890.06690641.743100.471803.178402.28620K562PCBP3
ACER3ENSG00000078124.7653.09150492.239600.407803.171502.30980K562POLR2G
ACER3ENSG00000078124.71458.842101195.169800.287502.930401.94440K562PUM2
ACER3ENSG00000078124.7650.84750832.96770-0.355902.359701.84980K562PUS1
ACER3ENSG00000078124.7447.50990622.64120-0.476503.386001.49390K562RECQL
ACER3ENSG00000078124.7803.31360445.259900.851208.131906.71630K562RPS19
ACER3ENSG00000078124.71009.34970599.358000.751804.904102.73540K562RPS3A
ACER3ENSG00000078124.71060.98100636.618700.7368012.5360010.90430K562SF3A3
ACER3ENSG00000078124.7850.24550583.577400.542903.846502.68750K562SF3B1
ACER3ENSG00000078124.7800.82460652.227800.296002.614601.69960K562SRPK2
ACER3ENSG00000078124.7650.72100423.259500.620404.599403.26400K562SUPV3L1
ACER3ENSG00000078124.7941.77970681.486800.466603.179501.88430K562UTP3
ACER3ENSG00000078124.7761.54460585.372400.379502.879401.98560K562WDR3
ACER3ENSG00000078124.7800.05470608.707100.394304.260403.22690K562WDR43
ACER3ENSG00000078124.71324.56400957.887200.467504.954203.22460K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ACER3 is not available on ENCORE database.





5 RBPs can affect the splicing of ACER3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEACER3ENSG00000078124.7chr11+7666850876668630766376007663771176670022766700750.067000.009010.07473includedK562AQR
SEACER3ENSG00000078124.7chr11+767260597672616176709806767098657672771876727823-0.214000.004130.05381excludedK562PUS1
SEACER3ENSG00000078124.7chr11+7657916376579311765719807657212376637600766377110.200000.000480.03714includedK562HNRNPL
SEACER3ENSG00000078124.7chr11+7657916376579311765719807657212376637600766377110.206000.001470.05411includedK562PTBP1
SEACER3ENSG00000078124.7chr11+7670519976705270767015827670161876709806767098650.347000.003520.05271includedK562HNRNPC
MXEACER3ENSG00000078124.7chr11+7667002276670075766701207667024476637600766377117668733276687385-0.132000.004590.033362includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ACER3 is not avaliable on ENCORE database.