WDR37

General Information

Gene Name       : WDR37
Gene ID             : ENSG00000047056.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: WDR37)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878WDR37ENSG00000047056.154.054.464.25ENCSR000AEF
HepG2WDR37ENSG00000047056.154.603.994.29ENCSR985KAT
K562WDR37ENSG00000047056.154.984.534.76ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for WDR37 is not avaliable on ENCORE database.



Proteins bound to RNA
  • WDR37 RNA is bound by 23 proteins.  







eCLIP assay for WDR37 is not avaliable on ENCORE database.





23 proteins are bound to WDR37 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1011777111177782+3'-UTR4.843057.78973K562TARDBP
chr1011421841142237+3'-UTR,CDS,intron-Proximal5.035846.04760K562AQR
chr1011776241177704+3'-UTR4.390963.26170K562EIF4G2
chr1011776281177711+3'-UTR5.0331917.83732K562TARDBP
chr1011027821102920+5'-UTR,intron-Distal,intron-Proximal3.753706.48632HepG2PRPF4
chr1011028241102898+5'-UTR,intron-Distal4.009453.30664K562NONO
chr1011262851126397+CDS,intron-Proximal4.363573.49885K562SMNDC1
chr1011495141149569+CDS,intron-Proximal4.369556.48405K562AQR
chr1011304201130483+CDS,intron-Proximal3.430533.40321HepG2GRWD1
chr1011322251132287+CDS,intron-Proximal3.094594.03389K562ZNF622
chr1011238521123924+CDS3.305323.61259K562ZNF622
chr1011322251132289+CDS,intron-Proximal3.808414.41267HepG2PPIG
chr1011303441130484+CDS,intron-Proximal3.106215.78238HepG2PPIG
chr1011239391123959+CDS,intron-Proximal4.473858.01338K562AQR
chr1011263021126377+CDS,intron-Proximal4.3706410.42818K562SF3B4
chr1011303901130478+CDS3.117147.87286K562ZNF622
chr1011706321170708+intron-Distal4.078863.22972K562TARDBP
chr1011392781139356+intron-Distal,intron-Proximal4.242494.79477K562KHSRP
chr1011391911139278+intron-Distal4.044974.07352K562KHSRP
chr1011323311132469+intron-Distal,intron-Proximal3.472568.05068K562KHSRP
chr1011565111156599+intron-Distal4.526145.37406HepG2HNRNPM
chr1011351291135197+intron-Distal3.804344.86210HepG2HNRNPM
chr1011351051135194+intron-Distal3.734185.54542K562HNRNPM
chr1011546771154725+intron-Distal3.997943.04182K562HNRNPM
chr1011535071153573+intron-Distal3.933163.50031HepG2HNRNPL
chr1011538541153978+intron-Distal3.538914.88761HepG2HNRNPL
chr1011426621142756+intron-Distal4.410545.40320K562NONO
chr1011111241111193+intron-Distal4.008024.30215K562SAFB2
chr1011095421109611+intron-Distal3.048963.67498K562SAFB2
chr1011325101132601+intron-Distal4.747947.17304K562KHSRP
chr1011113981111478+intron-Distal3.911703.65589K562SAFB2
chr1011425731142624+intron-Distal3.102383.61506K562NONO
chr1011416831141777+intron-Distal4.335233.87294K562TARDBP
chr1011567961156846+intron-Distal3.897453.07980HepG2HNRNPM
chr1011079581108056+intron-Distal4.269815.13876K562SAFB2
chr1011550921155157+intron-Distal4.288133.27946HepG2HNRNPM
chr1011696431169776+intron-Distal4.175193.08314K562TARDBP
chr1011102781110352+intron-Distal4.763387.10192K562SAFB2
chr1011561041156145+intron-Distal3.137853.31456K562TIA1
chr1011696041169744+intron-Distal4.097303.01445K562EXOSC5
chr1011031971103249+intron-Distal3.698813.14687K562CSTF2T
chr1010960921096185+intron-Distal5.394527.54661K562QKI
chr1011548431154936+intron-Distal4.948974.51309K562HNRNPM
chr1011277151127794+intron-Distal3.978158.11138K562KHSRP
chr1011550921155146+intron-Distal4.041673.29197K562HNRNPM
chr1011349671135056+intron-Distal4.946837.90787HepG2SUGP2
chr1011549561155009+intron-Distal3.711074.32964K562HNRNPM
chr1011479981148062+intron-Distal3.946683.30664K562NONO
chr1011668341166953+intron-Distal4.836976.88558K562HNRNPM
chr1011439581144007+intron-Distal3.840933.07008K562NONO
chr1011096121109678+intron-Distal4.136053.82973HepG2HLTF
chr1011344071134466+intron-Distal4.597276.36848HepG2SUGP2
chr1011351141135190+intron-Distal3.232183.10961HepG2MATR3
chr1011030291103091+intron-Distal4.602615.54520K562GTF2F1
chr1011548761154934+intron-Distal3.378413.90822HepG2HNRNPM
chr1011115681111649+intron-Distal3.766503.33164K562SAFB2
chr1011667731166864+intron-Distal4.458654.64592HepG2HNRNPM
chr1011032521103350+intron-Distal3.145183.90917HepG2PRPF4
chr1011461991146307+intron-Distal4.143373.60235HepG2HNRNPM
chr1011560961156183+intron-Distal5.017076.62732K562HNRNPM
chr1011364271136522+intron-Distal4.006983.54208HepG2SUGP2
chr1011621621162271+intron-Distal4.929955.92007HepG2DDX59
chr1011490121149073+intron-Distal4.859855.94008HepG2HNRNPM
chr1011550091155072+intron-Distal4.427924.52011K562HNRNPM
chr1011491281149274+intron-Distal4.593916.93191K562KHSRP
chr1011239591124010+intron-Proximal5.9738512.10660K562AQR
chr1011322971132319+intron-Proximal3.369555.28960K562AQR
chr1011323191132341+intron-Proximal3.442345.75231K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for WDR37 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for WDR37 is not available on ENCORE database.

  • 57 RBPs can affect the levels of WDR37.  








The Knockdown/knockout RNA-Seq assay for WDR37 is not available on ENCORE database.





57 RBPs can affect the gene expression of WDR37 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
WDR37ENSG00000047056.10316.13710598.97880-0.922007.426006.59880HepG2AKAP1
WDR37ENSG00000047056.10749.58720515.955200.538806.378805.40530HepG2AUH
WDR37ENSG00000047056.10453.05920270.834100.742205.796704.96890HepG2BOP1
WDR37ENSG00000047056.10356.28770244.380200.543803.258602.42870HepG2CALR
WDR37ENSG00000047056.10592.51900380.440100.639103.252102.41720HepG2CNOT7
WDR37ENSG00000047056.10626.30020508.926300.299302.419501.72030HepG2DAZAP1
WDR37ENSG00000047056.10298.61740376.06790-0.332702.120901.38330HepG2DDX19B
WDR37ENSG00000047056.10351.60060250.683000.488002.702601.72970HepG2DHX30
WDR37ENSG00000047056.10706.82490523.575700.432902.438901.83710HepG2EIF4A3
WDR37ENSG00000047056.10300.45470397.35680-0.403302.208801.46270HepG2EWSR1
WDR37ENSG00000047056.10430.18930291.872100.559503.372302.61300HepG2HNRNPC
WDR37ENSG00000047056.10475.39370268.978200.821506.395305.48240HepG2HNRNPLL
WDR37ENSG00000047056.10385.68520296.165800.380902.457301.76240HepG2ILF2
WDR37ENSG00000047056.10362.28040531.48240-0.552903.153702.48300HepG2MATR3
WDR37ENSG00000047056.10652.32390484.405500.429302.529801.83670HepG2PABPC4
WDR37ENSG00000047056.10473.36880319.379800.567602.806901.76000HepG2PCBP2
WDR37ENSG00000047056.10332.07790511.38280-0.622906.988606.13480HepG2PUM1
WDR37ENSG00000047056.10391.35410511.00860-0.384902.398201.77350HepG2PUM2
WDR37ENSG00000047056.10632.68910414.159600.611205.824504.99030HepG2PUS1
WDR37ENSG00000047056.10691.17830495.110100.481204.702704.07300HepG2RBM22
WDR37ENSG00000047056.10264.17990366.32020-0.471602.305501.40840HepG2RBM27
WDR37ENSG00000047056.10434.09320537.20060-0.307501.805501.34840HepG2NELFE
WDR37ENSG00000047056.10471.55720302.795600.639003.271602.24470HepG2RPS10
WDR37ENSG00000047056.10633.54370472.387900.423401.875801.31810HepG2SF3A3
WDR37ENSG00000047056.10219.43190314.46480-0.519102.222701.37370HepG2SMNDC1
WDR37ENSG00000047056.10668.61850559.217300.257701.756901.32980HepG2SRFBP1
WDR37ENSG00000047056.10418.90040524.54970-0.324501.918001.50370HepG2SRSF1
WDR37ENSG00000047056.10609.67500485.548000.328302.620402.11640HepG2SSB
WDR37ENSG00000047056.10426.35550540.93640-0.343402.482501.88740HepG2SUCLG1
WDR37ENSG00000047056.10325.30140239.954200.438902.330901.46240HepG2SUPT6H
WDR37ENSG00000047056.10416.35120281.722000.563404.045603.46540HepG2TIAL1
WDR37ENSG00000047056.10220.86140284.25220-0.364001.820901.34430HepG2TRIM56
WDR37ENSG00000047056.10408.01060303.975700.424602.039001.49060HepG2U2AF1
WDR37ENSG00000047056.10720.89300460.749000.645709.770108.90040HepG2ZNF622
WDR37ENSG00000047056.10681.40700526.269400.372602.335701.80670K562AGGF1
WDR37ENSG00000047056.10851.57850547.623300.636906.728805.67570K562AKAP8L
WDR37ENSG00000047056.102041.20460682.966901.5794042.2435040.19180K562AQR
WDR37ENSG00000047056.10405.78610275.135700.560503.177102.24200K562BOP1
WDR37ENSG00000047056.10190.59710339.30490-0.832106.452005.25170K562EIF3G
WDR37ENSG00000047056.10654.25530494.799000.402902.838702.00680K562EIF4A3
WDR37ENSG00000047056.10443.67220297.679000.575603.604802.62350K562FMR1
WDR37ENSG00000047056.10253.09170366.02550-0.532302.725001.32240K562GEMIN5
WDR37ENSG00000047056.10484.24770307.362100.655705.035104.25270K562HNRNPC
WDR37ENSG00000047056.10162.40200271.92050-0.743603.708602.61820K562HNRNPM
WDR37ENSG00000047056.10404.18020519.87060-0.363202.484501.63730K562HNRNPU
WDR37ENSG00000047056.10870.17130581.108600.582406.380605.00940K562KIF1C
WDR37ENSG00000047056.10857.34850650.996300.397103.087002.11760K562MBNL1
WDR37ENSG00000047056.10743.76650456.306300.704705.169203.83120K562NAA15
WDR37ENSG00000047056.10683.61400494.054000.468402.754801.52970K562NCBP2
WDR37ENSG00000047056.10599.45340350.348700.774803.209702.12170K562PABPN1
WDR37ENSG00000047056.10660.57330505.502800.385902.838801.47330K562PCBP1
WDR37ENSG00000047056.10615.37840460.040300.419602.723001.75130K562PCBP2
WDR37ENSG00000047056.10389.19020275.587300.497902.944702.00690K562PSIP1
WDR37ENSG00000047056.10995.15810542.976700.8739011.1104010.07150K562PUS1
WDR37ENSG00000047056.10802.99010529.144600.601607.487106.54150K562RBM15
WDR37ENSG00000047056.10634.16340481.643800.396802.633601.81500K562RBM22
WDR37ENSG00000047056.10241.45500361.86610-0.583702.853102.02360K562RPS19
WDR37ENSG00000047056.10573.27890320.375600.839403.243501.91430K562SF1
WDR37ENSG00000047056.10639.87920449.318700.510004.240403.24520K562SF3A3
WDR37ENSG00000047056.10537.30160413.915300.376302.484501.67520K562SF3B4
WDR37ENSG00000047056.10784.91280367.974101.092805.639303.67750K562SNRNP200
WDR37ENSG00000047056.10618.96510460.336300.427103.947902.85040K562SRPK2
WDR37ENSG00000047056.10615.87950482.827300.351002.816602.09180K562UPF1
WDR37ENSG00000047056.10813.12650550.638400.562302.543801.32410K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for WDR37 is not available on ENCORE database.





2 RBPs can affect the splicing of WDR37 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEWDR37ENSG00000047056.10chr10+1169922117004211510651151207117015711702920.251000.000000.00000includedK562AQR
A3SSWDR37ENSG00000047056.10chr10+1170805117096411708491170964117015711702920.056000.013010.06625longerK562AQR
A3SSWDR37ENSG00000047056.10chr10+1125924112604611259501126046112384611239430.372000.000020.00018longerK562AQR
A3SSWDR37ENSG00000047056.10chr10+1130322113047811303421130478112630311264160.127000.000800.00570longerK562AQR
MXEWDR37ENSG00000047056.10chr10+111805511182331123846112394310954771095581112595011260460.390000.001070.037111includedHepG2HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for WDR37 is not avaliable on ENCORE database.