WDR33

General Information

Gene Name       : WDR33
Gene ID             : ENSG00000136709.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: WDR33)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878WDR33ENSG00000136709.1126.7625.9926.38ENCSR000AEF
HepG2WDR33ENSG00000136709.1149.4957.1453.31ENCSR985KAT
K562WDR33ENSG00000136709.1122.4524.3623.41ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for WDR33 is not avaliable on ENCORE database.



Proteins bound to RNA
  • WDR33 RNA is bound by 37 proteins.  







eCLIP assay for WDR33 is not avaliable on ENCORE database.





37 proteins are bound to WDR33 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2128528498128528577-3'-UTR,5'-UTR,CDS,intron-Distal3.142984.51003HepG2PPIG
chr2128525761128525804-3'-UTR,CDS,intron-Distal,intron-Proximal4.235558.94445HepG2BCLAF1
chr2128493914128494004-3'-UTR,intron-Distal3.9492510.75820HepG2HNRNPL
chr2128493819128493885-3'-UTR,intron-Distal3.486383.47356HepG2HNRNPK
chr2128493188128493238-3'-UTR,intron-Distal4.002263.73609HepG2KHSRP
chr2128521648128521718-3'-UTR,intron-Distal3.761505.81300HepG2HNRNPL
chr2128495169128495272-3'-UTR,intron-Distal3.520247.92278HepG2MATR3
chr2128493171128493252-3'-UTR,intron-Distal3.765046.89441K562KHSRP
chr2128493064128493116-3'-UTR,intron-Distal3.211363.05068HepG2U2AF2
chr2128494169128494223-3'-UTR,intron-Distal3.312533.70059HepG2U2AF2
chr2128568536128568610-5'-UTR,intron-Distal,intron-Proximal3.156484.29223HepG2PRPF8
chr2128568545128568613-5'-UTR,intron-Distal,intron-Proximal4.853016.03362HepG2AQR
chr2128568471128568510-5'-UTR,intron-Distal4.265933.07980HepG2HNRNPM
chr2128568462128568523-5'-UTR,intron-Distal3.297083.63681K562RBM15
chr2128568585128568608-5'-UTR,intron-Distal,intron-Proximal3.102883.94979HepG2BCLAF1
chr2128568326128568470-5'-UTR,intron-Distal4.980746.11395HepG2GTF2F1
chr2128568688128568737-5'-UTR,intron-Distal,intron-Proximal4.198676.63159HepG2NCBP2
chr2128526505128526575-5'-UTR,CDS,intron-Distal,intron-Proximal4.7388224.45330HepG2BCLAF1
chr2128568417128568515-5'-UTR,intron-Distal3.176466.28376HepG2PRPF4
chr2128526523128526576-5'-UTR,CDS,intron-Distal,intron-Proximal3.199224.44630K562ZNF622
chr2128568347128568412-5'-UTR,intron-Distal3.953183.02181K562PRPF8
chr2128467262128467344-CDS,intron-Distal,intron-Proximal3.410484.17822HepG2PPIG
chr2128480200128480277-CDS,intron-Distal4.326244.45558HepG2GRWD1
chr2128480568128480619-CDS,intron-Distal,intron-Proximal4.308885.36555HepG2BCLAF1
chr2128522504128522553-CDS,intron-Distal3.365125.23038K562ZNF622
chr2128479548128479565-CDS,intron-Distal,intron-Proximal5.344367.04013HepG2BCLAF1
chr2128479454128479558-CDS,intron-Distal3.359733.24162HepG2G3BP1
chr2128522695128522758-CDS,intron-Distal,intron-Proximal3.428164.06013K562PRPF8
chr2128476909128477078-CDS,intron-Distal3.277484.10554HepG2G3BP1
chr2128467268128467327-CDS,intron-Distal4.130834.69071HepG2GRWD1
chr2128522446128522512-CDS,intron-Distal3.122028.38419HepG2GRWD1
chr2128522748128522844-CDS,intron-Distal,intron-Proximal3.729199.40911HepG2PPIG
chr2128467059128467130-CDS,intron-Distal,intron-Proximal3.761505.24452HepG2PPIG
chr2128522683128522750-CDS,intron-Distal,intron-Proximal3.942346.06472K562AQR
chr2128525824128525868-CDS,intron-Distal,intron-Proximal4.294665.13745K562YBX3
chr2128471316128471387-CDS,intron-Distal4.034624.21087HepG2GRWD1
chr2128471289128471367-CDS,intron-Distal3.057455.10448HepG2PPIG
chr2128482463128482480-CDS,intron-Distal4.687843.89826HepG2BCLAF1
chr2128471212128471387-CDS,intron-Distal5.370917.77669HepG2G3BP1
chr2128480177128480271-CDS,intron-Distal3.638324.20387K562ZNF622
chr2128525804128525868-CDS,intron-Distal,intron-Proximal5.0155224.93927HepG2BCLAF1
chr2128479484128479532-CDS,intron-Distal3.819364.51739HepG2BCLAF1
chr2128482635128482706-CDS,intron-Distal,intron-Proximal3.302144.49341HepG2BCLAF1
chr2128484316128484365-CDS,intron-Distal,intron-Proximal3.013156.45317HepG2U2AF2
chr2128528350128528368-CDS,intron-Distal,intron-Proximal4.325126.22576HepG2BCLAF1
chr2128479409128479484-CDS,intron-Distal,intron-Proximal4.774658.85766HepG2BCLAF1
chr2128522405128522554-CDS,intron-Distal,intron-Proximal3.158713.46619K562GRWD1
chr2128480181128480271-CDS,intron-Distal3.755063.80897HepG2FXR2
chr2128482632128482684-CDS,intron-Distal,intron-Proximal3.097325.97777HepG2PPIG
chr2128480827128480862-CDS,intron-Distal3.922594.09885HepG2BCLAF1
chr2128522763128522795-CDS,intron-Distal3.000195.99957HepG2BCLAF1
chr2128467384128467448-CDS,intron-Distal,intron-Proximal4.191924.36528HepG2U2AF2
chr2128528350128528374-CDS,intron-Distal,intron-Proximal3.102513.39306HepG2GRWD1
chr2128480163128480190-CDS,intron-Distal,intron-Proximal4.691307.09561HepG2BCLAF1
chr2128480190128480281-CDS,intron-Distal5.3524116.08161HepG2BCLAF1
chr2128467285128467339-CDS,intron-Distal4.101434.13513HepG2LIN28B
chr2128484223128484280-CDS,intron-Distal,intron-Proximal4.196784.01763HepG2GRWD1
chr2128522515128522568-CDS,intron-Distal,intron-Proximal3.496163.50696K562BUD13
chr2128467388128467494-CDS,intron-Distal,intron-Proximal4.417244.27476HepG2AQR
chr2128473453128473564-intron-Distal3.098593.00914HepG2PTBP1
chr2128496072128496133-intron-Distal3.614794.28254HepG2MATR3
chr2128501551128501623-intron-Distal4.513507.08005HepG2QKI
chr2128497872128497983-intron-Distal4.0225616.03005K562TARDBP
chr2128565184128565270-intron-Distal3.619729.50668HepG2PTBP1
chr2128552055128552107-intron-Distal4.622804.90095K562PTBP1
chr2128496371128496479-intron-Distal3.8444610.00149HepG2SUGP2
chr2128557493128557564-intron-Distal4.507938.59328HepG2QKI
chr2128499867128499919-intron-Distal3.012179.28759HepG2SUGP2
chr2128499010128499076-intron-Distal4.404169.65529HepG2MATR3
chr2128565623128565684-intron-Distal4.015888.28561HepG2QKI
chr2128568164128568271-intron-Distal3.178013.79378HepG2FUS
chr2128538858128538932-intron-Distal3.600524.33990HepG2QKI
chr2128498798128498852-intron-Distal4.6455219.59659HepG2PTBP1
chr2128561472128561512-intron-Distal3.075966.22432HepG2HNRNPC
chr2128513591128513674-intron-Distal3.797573.24242HepG2HNRNPC
chr2128504081128504195-intron-Distal3.141013.80514K562CPSF6
chr2128567885128567958-intron-Distal3.458264.83226HepG2HNRNPM
chr2128555353128555427-intron-Distal3.126253.26837HepG2HNRNPC
chr2128501956128502016-intron-Distal3.259313.53952HepG2KHSRP
chr2128548238128548340-intron-Distal4.2012810.14122HepG2CSTF2
chr2128498852128498903-intron-Distal4.0792932.04953HepG2PTBP1
chr2128499000128499073-intron-Distal4.8773920.18356HepG2SUGP2
chr2128496405128496488-intron-Distal3.243543.63322HepG2MATR3
chr2128538865128538917-intron-Distal4.772694.57427HepG2PCBP2
chr2128556554128556562-intron-Distal6.2439231.14061K562TROVE2
chr2128501623128501677-intron-Distal3.830004.52298HepG2QKI
chr2128498678128498739-intron-Distal4.294273.08314K562TARDBP
chr2128499287128499334-intron-Distal4.070894.13641K562TARDBP
chr2128499043128499112-intron-Distal4.5890719.21869K562TARDBP
chr2128501515128501648-intron-Distal3.453534.69565K562KHDRBS1
chr2128553492128553530-intron-Distal4.037523.55640HepG2QKI
chr2128498763128498852-intron-Distal3.314499.90285HepG2MATR3
chr2128498777128498928-intron-Distal5.0106115.89751K562MATR3
chr2128498833128498900-intron-Distal5.325458.60492HepG2PCBP2
chr2128562707128562826-intron-Distal3.864314.14989HepG2ILF3
chr2128507188128507241-intron-Distal3.7294211.55345HepG2HNRNPC
chr2128503520128503609-intron-Distal3.452073.06310K562HNRNPC
chr2128565996128566050-intron-Distal5.056587.27974HepG2QKI
chr2128502232128502298-intron-Distal3.986743.43967HepG2TAF15
chr2128485403128485474-intron-Distal3.748373.89405HepG2PTBP1
chr2128499227128499271-intron-Distal4.042188.18586HepG2SUGP2
chr2128534568128534648-intron-Distal3.639674.45054HepG2PCBP2
chr2128550196128550234-intron-Distal3.707153.00349HepG2ILF3
chr2128514779128514883-intron-Distal3.098816.88763K562KHSRP
chr2128496331128496357-intron-Distal4.159983.96879HepG2MATR3
chr2128496232128496267-intron-Distal4.950316.88667HepG2SUGP2
chr2128473503128473581-intron-Distal4.791934.32196HepG2PCBP2
chr2128507701128507767-intron-Distal5.136148.62944HepG2ILF3
chr2128498664128498727-intron-Distal3.307507.25521HepG2SUGP2
chr2128523763128523863-intron-Distal4.042233.24603K562KHSRP
chr2128528733128528964-intron-Distal3.988126.29998HepG2SFPQ
chr2128500941128500988-intron-Distal4.681926.62827HepG2SUGP2
chr2128473441128473499-intron-Distal3.674114.36528HepG2U2AF2
chr2128556534128556554-intron-Distal6.4275527.48167K562TROVE2
chr2128505520128505573-intron-Distal4.228936.15196HepG2HNRNPM
chr2128498999128499056-intron-Distal3.760733.30843K562EIF4G2
chr2128498596128498626-intron-Distal3.729534.61322HepG2MATR3
chr2128553977128554059-intron-Distal4.045593.58660HepG2ILF3
chr2128561512128561525-intron-Distal3.220466.91614HepG2HNRNPC
chr2128513869128513914-intron-Distal3.253014.48901HepG2HNRNPC
chr2128556562128556587-intron-Distal5.4251327.24888K562TROVE2
chr2128529316128529380-intron-Distal3.831705.76537HepG2PCBP2
chr2128500236128500314-intron-Distal3.834683.07980HepG2HNRNPM
chr2128498814128498898-intron-Distal5.6720824.15686K562PTBP1
chr2128498774128498798-intron-Distal3.223353.45713HepG2PTBP1
chr2128500346128500403-intron-Distal4.614795.01910HepG2MATR3
chr2128495824128495860-intron-Distal3.499734.81844HepG2SUGP2
chr2128485072128485163-intron-Distal5.2623920.59576HepG2XPO5
chr2128501254128501279-intron-Distal3.033244.92376HepG2MATR3
chr2128498990128499043-intron-Distal4.4980411.87937K562TARDBP
chr2128486868128486971-intron-Distal3.276543.06005HepG2QKI
chr2128538218128538271-intron-Distal3.040964.00440HepG2ILF3
chr2128551688128551763-intron-Distal3.2004711.40413HepG2PTBP1
chr2128557564128557637-intron-Distal3.054276.36816HepG2QKI
chr2128551703128551765-intron-Distal3.920606.39777K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for WDR33 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for WDR33 is not available on ENCORE database.

  • 49 RBPs can affect the levels of WDR33.  








The Knockdown/knockout RNA-Seq assay for WDR33 is not available on ENCORE database.





49 RBPs can affect the gene expression of WDR33 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
WDR33ENSG00000136709.71498.857802000.24570-0.416304.141903.42620HepG2BOP1
WDR33ENSG00000136709.71371.543901836.30280-0.421003.969803.15970HepG2CPSF6
WDR33ENSG00000136709.72906.009903251.36980-0.162002.192501.52120HepG2DAZAP1
WDR33ENSG00000136709.71712.234402066.83590-0.271502.123701.52100HepG2DDX21
WDR33ENSG00000136709.72499.424303336.46320-0.416703.620002.91500HepG2DDX3X
WDR33ENSG00000136709.72579.218902268.966300.184801.946501.36330HepG2DKC1
WDR33ENSG00000136709.71577.059701867.68160-0.244003.394502.68550HepG2DNAJC2
WDR33ENSG00000136709.72820.420503730.26570-0.403408.240907.29830HepG2ETF1
WDR33ENSG00000136709.72385.922602885.99610-0.274502.091701.47850HepG2HNRNPK
WDR33ENSG00000136709.72241.931102816.99310-0.329402.379801.70600HepG2PABPC4
WDR33ENSG00000136709.71743.995602080.75020-0.254703.081102.19050HepG2PARN
WDR33ENSG00000136709.72357.995002960.75680-0.328404.883904.20060HepG2PTBP1
WDR33ENSG00000136709.72760.820703264.67350-0.241802.379301.75650HepG2PUM2
WDR33ENSG00000136709.72630.904503117.83720-0.245002.736902.22100HepG2RBM22
WDR33ENSG00000136709.72701.691103068.98680-0.183901.959201.42820HepG2RECQL
WDR33ENSG00000136709.71911.117702294.12550-0.263501.967601.37960HepG2RPLP0
WDR33ENSG00000136709.71654.341101872.02900-0.178301.895701.34610HepG2SAFB2
WDR33ENSG00000136709.72578.013201966.119700.390803.715402.90890HepG2SF3B1
WDR33ENSG00000136709.71895.722402183.12440-0.203602.826402.17670HepG2SMN1
WDR33ENSG00000136709.71748.581502397.91340-0.455602.959801.96710HepG2SMNDC1
WDR33ENSG00000136709.73994.896003521.527100.181901.735701.31030HepG2SRFBP1
WDR33ENSG00000136709.73843.790003217.328200.256604.360703.79980HepG2SRSF1
WDR33ENSG00000136709.72251.595603038.73540-0.432508.985807.94350HepG2SRSF5
WDR33ENSG00000136709.73451.643803057.597400.174802.229401.75760HepG2SSB
WDR33ENSG00000136709.72876.471703455.87250-0.264704.686603.91460HepG2SUCLG1
WDR33ENSG00000136709.71683.308502095.98320-0.316302.049501.45460HepG2SUPV3L1
WDR33ENSG00000136709.72438.721702892.15540-0.246002.637702.08890HepG2TAF15
WDR33ENSG00000136709.71498.046401936.38190-0.370303.212302.43630HepG2TARDBP
WDR33ENSG00000136709.71449.627902042.67020-0.494807.354406.61020HepG2TIAL1
WDR33ENSG00000136709.71696.895202060.83970-0.280303.773903.13750HepG2TRIM56
WDR33ENSG00000136709.72795.349002133.151700.389903.887303.14710HepG2U2AF1
WDR33ENSG00000136709.72152.740402530.45780-0.233203.186802.44740HepG2UPF1
WDR33ENSG00000136709.72387.573302783.01310-0.221103.564502.96490HepG2ZNF622
WDR33ENSG00000136709.72069.104901728.920700.259003.226702.62240K562AGGF1
WDR33ENSG00000136709.71122.030501429.09050-0.349002.493101.66770K562BOP1
WDR33ENSG00000136709.71236.227101519.54280-0.297702.593701.83330K562CPSF6
WDR33ENSG00000136709.71016.200201245.56610-0.293602.301801.35540K562DDX3X
WDR33ENSG00000136709.72316.414001935.879000.258802.953002.04330K562DKC1
WDR33ENSG00000136709.71844.305301457.362700.339602.219601.30340K562EIF3D
WDR33ENSG00000136709.71469.550301810.87030-0.301302.336901.55810K562FIP1L1
WDR33ENSG00000136709.72214.001201353.302800.7101017.1169015.72450K562FXR1
WDR33ENSG00000136709.71192.927701450.79710-0.282302.038401.35330K562GPKOW
WDR33ENSG00000136709.72343.316203011.06790-0.361703.907503.01320K562GRSF1
WDR33ENSG00000136709.72805.029302197.409900.352103.753102.49550K562HNRNPL
WDR33ENSG00000136709.71886.491802455.15010-0.380103.537802.64130K562HSPD1
WDR33ENSG00000136709.71603.461701880.82900-0.230202.604701.81900K562MTPAP
WDR33ENSG00000136709.71758.080802089.81660-0.249404.139503.24650K562NSUN2
WDR33ENSG00000136709.71645.449702055.70170-0.321102.569301.78350K562PPIG
WDR33ENSG00000136709.71786.908401324.512200.431903.932103.03960K562PRPF8
WDR33ENSG00000136709.74939.642803502.824600.495807.331306.00120K562PUF60
WDR33ENSG00000136709.72135.866601784.139800.259501.793901.33820K562PUS1
WDR33ENSG00000136709.72021.965501738.370400.217901.986501.46890K562RBM15
WDR33ENSG00000136709.71917.952101521.312800.334103.290702.52350K562SRSF1
WDR33ENSG00000136709.71871.441001378.549700.440905.698404.51150K562SYNCRIP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for WDR33 is not available on ENCORE database.





5 RBPs can affect the splicing of WDR33 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEWDR33ENSG00000136709.7chr2-128481906128482017128480826128480921128482460128482539-0.207000.000000.00019excludedHepG2U2AF1
SEWDR33ENSG00000136709.7chr2-128481906128482017128480826128480921128482460128482539-0.281000.000000.00002excludedHepG2U2AF2
SEWDR33ENSG00000136709.7chr2-128474728128474837128471381128471595128476838128477927-0.057000.009120.07546excludedK562AQR
SEWDR33ENSG00000136709.7chr2-128481906128482017128480826128480921128482460128482539-0.127000.003850.06676excludedK562U2AF1
SEWDR33ENSG00000136709.7chr2-128481906128482017128480826128480921128482460128482539-0.163000.000300.00729excludedK562U2AF2
A3SSWDR33ENSG00000136709.7chr2-1284801641284803551284801641284803041284805311284807260.052000.000090.00077longerK562AQR
A3SSWDR33ENSG00000136709.7chr2-1285227471285228851285227471285228431285257621285259960.071000.000000.00000longerK562AQR
A3SSWDR33ENSG00000136709.7chr2-1285257621285259001285257621285258671285265061285265750.054000.000030.00027longerK562AQR
A3SSWDR33ENSG00000136709.7chr2-1284808261284809751284808261284809211284819061284820170.055000.000120.00103longerK562AQR
A3SSWDR33ENSG00000136709.7chr2-1284662501284664871284662501284664661284670631284671780.382000.000000.00000longerK562AQR
A3SSWDR33ENSG00000136709.7chr2-128528351128528570128528351128528508128568585128568745-0.062000.004470.02617shorterK562AQR
MXEWDR33ENSG00000136709.7chr2-1284711561284715951284747281284748371284672661284674301284768381284779270.167000.000440.018911includedK562SBDS
MXEWDR33ENSG00000136709.7chr2-1284711561284715951284747281284748371284672661284674301284768381284779270.192000.000250.012211includedK562PPIL4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for WDR33 is not avaliable on ENCORE database.