TRAPPC9

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TRAPPC9	ENSG00000167632.15	8.79	7.79	8.29	ENCSR000AEF
HepG2	TRAPPC9	ENSG00000167632.15	3.90	3.40	3.65	ENCSR985KAT
K562	TRAPPC9	ENSG00000167632.15	5.45	6.41	5.93	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TRAPPC9 is not avaliable on ENCORE database.

Proteins bound to RNA

TRAPPC9 RNA is bound by 36 proteins.

eCLIP assay for TRAPPC9 is not avaliable on ENCORE database.

36 proteins are bound to TRAPPC9 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	140743076	140743221	-	3'-UTR,intron-Distal,intron-Proximal	3.09558	3.20331	K562	CSTF2T
chr8	141467735	141467813	-	5'-UTR,intron-Distal	4.32643	3.86664	K562	DDX3X
chr8	141460887	141460956	-	CDS,intron-Distal,intron-Proximal	4.58034	4.70478	HepG2	BCLAF1
chr8	141445317	141445340	-	CDS,intron-Distal,intron-Proximal	3.47893	4.13746	HepG2	PPIG
chr8	141460925	141461021	-	CDS,intron-Distal	4.65575	5.87377	HepG2	PPIG
chr8	141415675	141415777	-	CDS,intron-Distal,intron-Proximal	4.87282	5.68196	HepG2	BCLAF1
chr8	141449150	141449189	-	CDS,intron-Distal,intron-Proximal	3.59193	4.41267	HepG2	PPIG
chr8	141407718	141407845	-	CDS,intron-Distal,intron-Proximal	4.75660	5.23259	HepG2	BCLAF1
chr8	141461073	141461125	-	CDS,intron-Distal,intron-Proximal	3.90137	3.28989	K562	RBM15
chr8	140922369	140922537	-	CDS,intron-Distal,intron-Proximal	4.11872	4.04622	HepG2	GRWD1
chr8	141460887	141461024	-	CDS,intron-Distal,intron-Proximal	3.12782	3.60157	HepG2	GRWD1
chr8	140816283	140816342	-	intron-Distal	4.02960	3.96304	K562	CSTF2T
chr8	140818472	140818560	-	intron-Distal,intron-Proximal	3.84185	8.83513	HepG2	CSTF2T
chr8	140814993	140815148	-	intron-Distal	6.44127	15.64735	HepG2	XPO5
chr8	140808219	140808300	-	intron-Distal	4.76515	6.17200	HepG2	PCBP2
chr8	140772304	140772390	-	intron-Distal	3.72020	3.27276	HepG2	HNRNPL
chr8	140755901	140756017	-	intron-Distal	5.57279	7.42650	HepG2	XPO5
chr8	141206918	141207043	-	intron-Distal	6.46073	23.36166	K562	EXOSC5
chr8	141119963	141120017	-	intron-Distal	4.15590	3.06537	K562	RBFOX2
chr8	140763810	140763890	-	intron-Distal	4.63344	7.66106	K562	EIF4G2
chr8	141110037	141110122	-	intron-Distal	4.97839	9.91866	K562	SLTM
chr8	140816173	140816283	-	intron-Distal	4.75199	6.64314	K562	CSTF2T
chr8	141120322	141120394	-	intron-Distal	4.82256	11.84193	HepG2	RBFOX2
chr8	140744207	140744222	-	intron-Distal,intron-Proximal	4.44234	3.11721	K562	AQR
chr8	140814982	140815119	-	intron-Distal	6.93372	90.28279	K562	AGGF1
chr8	140818475	140818555	-	intron-Distal,intron-Proximal	4.72972	6.12846	K562	EWSR1
chr8	140803427	140803486	-	intron-Distal	5.43013	4.67055	K562	EIF4G2
chr8	141220560	141220708	-	intron-Distal	4.32590	5.35385	HepG2	PRPF4
chr8	140817502	140817612	-	intron-Distal	3.17355	3.90992	HepG2	LSM11
chr8	140815195	140815290	-	intron-Distal	4.80475	8.48317	HepG2	HNRNPL
chr8	140773898	140774052	-	intron-Distal	4.74136	7.35173	HepG2	CSTF2T
chr8	141110042	141110095	-	intron-Distal	4.14298	3.60449	K562	YWHAG
chr8	141281943	141282027	-	intron-Distal	6.42756	21.05258	K562	AGGF1
chr8	141108731	141108778	-	intron-Distal	4.25254	4.65077	K562	YWHAG
chr8	141205498	141205593	-	intron-Distal	4.35936	5.89423	HepG2	HNRNPM
chr8	140817554	140817619	-	intron-Distal	3.80358	5.86001	HepG2	CSTF2T
chr8	140850182	140850237	-	intron-Distal	3.66794	3.90201	K562	SLTM
chr8	141205310	141205358	-	intron-Distal	5.07963	14.17115	K562	EXOSC5
chr8	140885297	140885414	-	intron-Distal	4.41251	11.88856	K562	AGGF1
chr8	140817245	140817307	-	intron-Distal	4.88611	7.68431	HepG2	CSTF2T
chr8	141130632	141130782	-	intron-Distal	7.44120	25.43040	K562	EIF4G2
chr8	141147612	141147699	-	intron-Distal	3.31261	3.38316	HepG2	SFPQ
chr8	140815794	140815844	-	intron-Distal	4.63851	6.70034	HepG2	CSTF2T
chr8	141206195	141206251	-	intron-Distal	6.09265	14.65468	K562	EXOSC5
chr8	140815026	140815099	-	intron-Distal	3.51393	3.15678	K562	AKAP8L
chr8	141210645	141210779	-	intron-Distal	3.48188	5.10104	K562	NONO
chr8	140883981	140884114	-	intron-Distal	3.56020	9.89269	HepG2	HNRNPL
chr8	140889741	140889883	-	intron-Distal	3.27314	3.69530	HepG2	CSTF2T
chr8	140884725	140884755	-	intron-Distal	5.01709	5.18780	K562	AGGF1
chr8	140815119	140815239	-	intron-Distal	6.20642	53.87564	K562	AGGF1
chr8	140815123	140815229	-	intron-Distal	5.24679	14.12351	HepG2	AGGF1
chr8	140818560	140818620	-	intron-Distal,intron-Proximal	3.25211	6.05986	HepG2	CSTF2T
chr8	140763803	140763878	-	intron-Distal	4.88910	3.77602	K562	DDX52
chr8	141130887	141130967	-	intron-Distal	6.25686	10.98400	K562	EIF4G2
chr8	140816160	140816214	-	intron-Distal	3.84951	3.18535	HepG2	LSM11
chr8	140816191	140816328	-	intron-Distal	3.69693	6.15110	K562	EWSR1
chr8	140812939	140813034	-	intron-Distal	5.94030	16.68942	HepG2	CSTF2T
chr8	140815481	140815551	-	intron-Distal	4.50679	10.16445	HepG2	AGGF1
chr8	140812901	140812999	-	intron-Distal	3.50200	9.07580	HepG2	FAM120A
chr8	140842144	140842224	-	intron-Distal	5.18344	6.00625	K562	EIF4G2
chr8	140859157	140859234	-	intron-Distal	4.02398	3.69425	K562	TARDBP
chr8	140815560	140815624	-	intron-Distal	4.04238	3.19036	K562	HNRNPL
chr8	141175590	141175693	-	intron-Distal	3.78483	3.08243	K562	ILF3
chr8	140814671	140814748	-	intron-Distal	5.56077	13.30116	HepG2	CSTF2T
chr8	141120183	141120340	-	intron-Distal	5.31597	7.25108	K562	RBFOX2
chr8	141136364	141136530	-	intron-Distal	3.05788	4.32983	K562	NONO
chr8	140816244	140816289	-	intron-Distal	5.02325	7.56138	HepG2	FAM120A
chr8	140814638	140814671	-	intron-Distal	4.73264	5.36332	HepG2	CSTF2T
chr8	140843515	140843584	-	intron-Distal	4.55192	8.13013	K562	EIF4G2
chr8	140884401	140884526	-	intron-Distal	3.08625	4.66424	HepG2	HNRNPL
chr8	140813714	140813766	-	intron-Distal	3.09805	5.44187	HepG2	CSTF2T
chr8	140802133	140802207	-	intron-Distal	4.60789	5.11753	HepG2	CSTF2T
chr8	141110650	141110710	-	intron-Distal	4.38284	5.37287	K562	SLTM
chr8	140919721	140919800	-	intron-Distal	5.65880	11.88842	HepG2	PCBP2
chr8	141299205	141299297	-	intron-Distal	3.65662	3.14791	K562	HNRNPL
chr8	140816256	140816359	-	intron-Distal	4.23321	4.44706	K562	EIF4G2
chr8	140847582	140847639	-	intron-Distal	3.18668	3.01707	K562	SLTM
chr8	141225103	141225225	-	intron-Distal	3.22893	4.23271	HepG2	HNRNPM
chr8	140884448	140884502	-	intron-Distal	3.85261	5.43961	HepG2	AGGF1
chr8	141204831	141204871	-	intron-Distal	5.76671	13.32155	K562	EXOSC5
chr8	140842727	140842795	-	intron-Distal	4.21565	4.13641	K562	TARDBP
chr8	140770051	140770098	-	intron-Distal	3.22382	3.92299	HepG2	CSTF2T
chr8	140850278	140850376	-	intron-Distal	3.69142	3.10466	K562	SAFB2
chr8	141106308	141106378	-	intron-Distal	4.11852	6.95650	HepG2	PCBP2
chr8	141282027	141282220	-	intron-Distal	5.61920	28.50617	K562	AGGF1
chr8	140883937	140884076	-	intron-Distal	4.77920	8.01034	HepG2	AGGF1
chr8	140815551	140815612	-	intron-Distal	4.91005	4.74920	HepG2	AGGF1
chr8	140815618	140815740	-	intron-Distal	5.91584	16.68942	HepG2	CSTF2T
chr8	141414831	141414974	-	intron-Distal	4.49040	5.85450	K562	HNRNPL
chr8	141205149	141205200	-	intron-Distal	5.73601	13.32329	K562	EXOSC5
chr8	141108451	141108547	-	intron-Distal	5.55272	8.36069	HepG2	SLTM
chr8	140815467	140815504	-	intron-Distal	4.63796	4.51080	HepG2	HNRNPL
chr8	140842804	140842933	-	intron-Distal	4.59584	5.71021	K562	TARDBP
chr8	140843869	140843916	-	intron-Distal	4.26840	5.34995	K562	EIF4G2
chr8	141205497	141205573	-	intron-Distal	5.73673	27.02343	K562	EXOSC5
chr8	141142612	141142662	-	intron-Distal	3.54015	3.11000	HepG2	HNRNPM
chr8	140803701	140803754	-	intron-Distal	4.27728	4.61649	HepG2	CSTF2T
chr8	140817396	140817451	-	intron-Distal	4.11531	3.86024	K562	EWSR1
chr8	141190186	141190262	-	intron-Distal	3.63796	3.10466	K562	SAFB2
chr8	140806502	140806565	-	intron-Distal	4.40879	4.36133	HepG2	CSTF2T
chr8	141204871	141204956	-	intron-Distal	6.69512	27.06850	K562	EXOSC5
chr8	140813456	140813514	-	intron-Distal	3.78036	6.48652	HepG2	CSTF2T
chr8	140773694	140773779	-	intron-Distal	3.33088	4.14880	HepG2	CSTF2T
chr8	140883964	140884107	-	intron-Distal	4.45210	5.13745	K562	YBX3
chr8	140812999	140813158	-	intron-Distal	5.03643	13.48337	HepG2	FAM120A
chr8	140814291	140814348	-	intron-Distal	4.45776	5.67757	HepG2	CSTF2T
chr8	140815770	140815841	-	intron-Distal	5.04748	6.43973	HepG2	AGGF1
chr8	140897885	140897964	-	intron-Distal	3.79589	3.31905	K562	NONO
chr8	140813821	140813867	-	intron-Distal	3.59540	5.62912	HepG2	CSTF2T
chr8	141175603	141175694	-	intron-Distal	4.59847	3.97933	HepG2	DDX59
chr8	140813724	140813788	-	intron-Distal	4.09120	4.02823	K562	HNRNPL
chr8	141142659	141142718	-	intron-Distal	4.51487	4.27460	K562	HNRNPM
chr8	140849556	140849636	-	intron-Distal	3.83143	8.01732	K562	SLTM
chr8	140815612	140815719	-	intron-Distal	5.54748	7.65506	HepG2	AGGF1
chr8	140817411	140817462	-	intron-Distal	4.88122	6.32277	HepG2	CSTF2T
chr8	140814995	140815102	-	intron-Distal	4.87514	6.40009	HepG2	GTF2F1
chr8	140814897	140815140	-	intron-Distal	5.17486	35.78970	HepG2	HNRNPL
chr8	141207220	141207305	-	intron-Distal	4.05405	9.48246	K562	PTBP1
chr8	140817089	140817143	-	intron-Distal	3.93507	3.59284	HepG2	LSM11
chr8	141158339	141158441	-	intron-Distal	3.96148	3.08314	K562	TARDBP
chr8	140884256	140884320	-	intron-Distal	6.62824	20.80577	K562	AGGF1
chr8	140849905	140850019	-	intron-Distal	5.61385	8.73743	HepG2	SLTM
chr8	140764019	140764107	-	intron-Distal	5.41627	7.07160	K562	EIF4G2
chr8	141120226	141120312	-	intron-Distal	5.37615	5.19464	K562	DROSHA
chr8	140765834	140765891	-	intron-Distal	4.97592	3.72755	K562	EIF4G2
chr8	141225112	141225208	-	intron-Distal	4.01543	3.76710	K562	NONO
chr8	140817549	140817620	-	intron-Distal	4.39796	4.29728	HepG2	FAM120A
chr8	141206058	141206136	-	intron-Distal	4.30470	3.28572	K562	HNRNPM
chr8	140883967	140884081	-	intron-Distal	4.89139	7.67538	K562	HNRNPL
chr8	140817778	140817844	-	intron-Distal	4.35718	8.42985	HepG2	CSTF2T
chr8	140817356	140817424	-	intron-Distal	4.08326	4.27357	HepG2	LSM11
chr8	141108930	141108996	-	intron-Distal	4.53761	8.24751	K562	SLTM
chr8	140843300	140843360	-	intron-Distal	5.72717	7.55693	K562	EIF4G2
chr8	140885635	140885674	-	intron-Distal	4.67521	4.74405	K562	AGGF1
chr8	140763890	140763973	-	intron-Distal	3.54038	3.06755	K562	EIF4G2
chr8	140814685	140814736	-	intron-Distal	4.49315	4.42836	K562	AKAP8L
chr8	140814994	140815024	-	intron-Distal	4.71723	5.71957	HepG2	AGGF1
chr8	140815769	140815840	-	intron-Distal	4.10359	3.59284	HepG2	LSM11
chr8	141436464	141436562	-	intron-Distal	3.95523	3.69425	K562	TARDBP
chr8	140884081	140884160	-	intron-Distal	4.03810	3.59673	K562	HNRNPL
chr8	140849546	140849614	-	intron-Distal	3.86635	3.16310	HepG2	CSTF2T
chr8	140803491	140803575	-	intron-Distal	5.42400	11.93667	K562	EIF4G2
chr8	141206869	141207038	-	intron-Distal	4.18209	3.60944	K562	TARDBP
chr8	140769784	140769885	-	intron-Distal	4.56976	5.93727	HepG2	CSTF2T
chr8	140759638	140759743	-	intron-Distal	3.79760	3.19526	HepG2	CSTF2T
chr8	141206103	141206160	-	intron-Distal	5.74218	23.04165	K562	EXOSC5
chr8	140803489	140803575	-	intron-Distal	4.34812	4.23131	HepG2	IGF2BP1
chr8	141142662	141142716	-	intron-Distal	3.43586	3.68481	HepG2	HNRNPM
chr8	141300136	141300294	-	intron-Distal	3.99565	3.27946	HepG2	HNRNPM
chr8	141108404	141108446	-	intron-Distal	5.09036	6.45102	K562	SLTM
chr8	140814977	140815120	-	intron-Distal	4.67903	13.89474	K562	HNRNPL
chr8	141130782	141130887	-	intron-Distal	6.77906	15.43836	K562	EIF4G2
chr8	140815788	140815841	-	intron-Distal	4.21042	4.02199	K562	HNRNPL
chr8	140817804	140817855	-	intron-Distal	3.31334	3.04054	K562	GTF2F1
chr8	140884449	140884528	-	intron-Distal	6.31487	37.13218	K562	AGGF1
chr8	140815762	140815854	-	intron-Distal	5.11115	6.02367	K562	GTF2F1
chr8	140815391	140815519	-	intron-Distal	5.59862	32.95921	K562	AGGF1
chr8	141348923	141348977	-	intron-Distal	4.29997	3.03671	K562	HNRNPM
chr8	141108352	141108397	-	intron-Distal	4.47452	8.91366	K562	SLTM
chr8	140815768	140815861	-	intron-Distal	4.46205	4.75718	K562	EWSR1
chr8	141282000	141282102	-	intron-Distal	4.49298	3.71677	HepG2	HNRNPL
chr8	140814670	140814755	-	intron-Distal	5.46942	19.13242	K562	AGGF1
chr8	140815140	140815188	-	intron-Distal	5.55512	6.92541	HepG2	HNRNPL
chr8	140842535	140842707	-	intron-Distal	5.29329	9.71026	K562	TARDBP
chr8	140814421	140814462	-	intron-Distal	3.70816	3.14791	K562	HNRNPL
chr8	140815395	140815467	-	intron-Distal	4.33347	9.20850	HepG2	HNRNPL
chr8	141141687	141141731	-	intron-Distal	4.71334	5.37406	HepG2	HNRNPM
chr8	140842358	140842433	-	intron-Distal	6.37960	12.95876	K562	EIF4G2
chr8	140884085	140884160	-	intron-Distal	7.21967	38.12622	K562	AGGF1
chr8	141141668	141141730	-	intron-Distal	4.30470	3.28572	K562	HNRNPM
chr8	140881159	140881245	-	intron-Distal	5.07770	4.40618	K562	PTBP1
chr8	140814665	140814739	-	intron-Distal	3.27815	4.03313	K562	HNRNPL
chr8	140887356	140887456	-	intron-Distal	4.66449	5.41525	HepG2	PCBP2
chr8	140817492	140817541	-	intron-Distal	4.62336	5.60609	HepG2	CSTF2T
chr8	140812893	140812939	-	intron-Distal	3.85902	5.32871	HepG2	CSTF2T
chr8	141108517	141108592	-	intron-Distal	5.61375	7.47718	K562	SLTM
chr8	140803677	140803761	-	intron-Distal	6.61598	15.93547	K562	EIF4G2
chr8	140800798	140800863	-	intron-Distal	3.87179	3.40229	HepG2	CSTF2T
chr8	140859835	140859927	-	intron-Distal	4.20494	3.36882	K562	SLTM
chr8	141130580	141130632	-	intron-Distal	6.29372	13.45380	K562	EIF4G2
chr8	140883831	140883858	-	intron-Distal	5.24339	6.98111	K562	AGGF1
chr8	141147611	141147723	-	intron-Distal	4.99885	8.09947	K562	NONO
chr8	140883952	140884085	-	intron-Distal	6.42389	57.12892	K562	AGGF1
chr8	140865388	140865456	-	intron-Distal	4.60862	4.09073	K562	SLTM
chr8	140813688	140813816	-	intron-Distal	4.25226	3.73283	HepG2	HNRNPL
chr8	140843796	140843843	-	intron-Distal	4.99847	4.19739	K562	EIF4G2
chr8	140850149	140850278	-	intron-Distal	3.71138	3.19638	K562	SAFB2
chr8	141186343	141186437	-	intron-Distal	4.49877	6.26905	K562	SAFB2
chr8	140815956	140815990	-	intron-Distal	3.98639	3.19125	K562	GTF2F1
chr8	141105605	141105698	-	intron-Distal	4.69358	4.42400	K562	SLTM
chr8	140868613	140868687	-	intron-Distal	4.12894	3.42967	K562	SLTM
chr8	141206796	141206946	-	intron-Distal	5.19615	5.31171	K562	HNRNPM
chr8	141188356	141188459	-	intron-Distal	4.17842	4.15306	K562	SAFB2
chr8	141108613	141108660	-	intron-Distal	4.38406	5.17150	K562	YWHAG
chr8	140850278	140850323	-	intron-Distal	3.51816	3.01707	K562	SLTM
chr8	141130621	141130768	-	intron-Distal	4.02113	3.60944	K562	TARDBP
chr8	140803438	140803524	-	intron-Distal	4.02960	3.96304	K562	CSTF2T
chr8	140803762	140803822	-	intron-Distal	5.91316	9.50986	K562	EIF4G2
chr8	140881166	140881231	-	intron-Distal	3.29211	3.59395	HepG2	PTBP1
chr8	141153202	141153268	-	intron-Distal	3.32232	3.59771	HepG2	QKI
chr8	140847639	140847704	-	intron-Distal	4.49742	4.14527	K562	SLTM
chr8	140815548	140815600	-	intron-Distal	5.37043	11.53530	HepG2	CSTF2T
chr8	141414809	141414981	-	intron-Distal	6.26178	18.94406	K562	AGGF1
chr8	140843634	140843734	-	intron-Distal	4.44098	4.66266	K562	TARDBP
chr8	140817170	140817213	-	intron-Distal	3.35902	4.35339	HepG2	CSTF2T
chr8	140849917	140849966	-	intron-Distal	4.78990	4.42400	K562	SLTM
chr8	140849910	140849963	-	intron-Distal	3.68309	3.22483	K562	SAFB2
chr8	141207214	141207317	-	intron-Distal	3.74735	4.78196	HepG2	PTBP1
chr8	140812764	140812828	-	intron-Distal	4.97793	8.56618	HepG2	CSTF2T
chr8	141175635	141175764	-	intron-Distal	5.11932	14.65053	HepG2	PCBP2
chr8	140744176	140744207	-	intron-Distal,intron-Proximal	4.74759	4.13847	K562	AQR
chr8	141120165	141120322	-	intron-Distal	5.20706	18.30456	HepG2	RBFOX2
chr8	141141810	141141876	-	intron-Distal	3.33263	3.11000	HepG2	HNRNPM
chr8	141130610	141130916	-	intron-Distal	7.40543	22.91754	HepG2	DKC1
chr8	140803781	140803834	-	intron-Distal	3.71006	3.06406	HepG2	IGF2BP1
chr8	140803456	140803588	-	intron-Distal	5.03349	8.29844	HepG2	DKC1
chr8	141108734	141108790	-	intron-Distal	5.45884	8.16466	K562	SLTM
chr8	140814185	140814227	-	intron-Distal	4.18506	4.10564	HepG2	CSTF2T
chr8	140815552	140815588	-	intron-Distal	4.57279	4.22343	HepG2	XPO5
chr8	140803170	140803239	-	intron-Distal	3.44562	4.14880	HepG2	CSTF2T
chr8	140816183	140816325	-	intron-Distal	4.55491	8.62201	K562	GTF2F1
chr8	140815779	140815824	-	intron-Distal	5.69363	12.00098	K562	AGGF1
chr8	140816226	140816320	-	intron-Distal	5.82632	15.63072	HepG2	CSTF2T
chr8	140842404	140842511	-	intron-Distal	4.59584	5.71021	K562	TARDBP
chr8	140883992	140884034	-	intron-Distal	4.24331	4.60713	HepG2	XPO5
chr8	140884251	140884323	-	intron-Distal	3.75058	6.39350	HepG2	HNRNPL
chr8	140769402	140769500	-	intron-Distal	4.51408	5.15063	HepG2	CSTF2T
chr8	140812953	140813034	-	intron-Distal	4.61705	4.92659	K562	FAM120A
chr8	141047581	141047662	-	intron-Distal	4.91316	4.67055	K562	EIF4G2
chr8	140815634	140815716	-	intron-Distal	4.07027	3.80435	HepG2	LSM11
chr8	141206718	141206879	-	intron-Distal	5.52678	22.37687	K562	EXOSC5
chr8	141205358	141205420	-	intron-Distal	6.29950	18.99984	K562	EXOSC5
chr8	140817350	140817411	-	intron-Distal	4.30035	8.91945	HepG2	CSTF2T
chr8	140918745	140918854	-	intron-Distal	3.41594	5.84135	HepG2	PCBP2
chr8	140813648	140813694	-	intron-Distal	3.06285	4.24473	HepG2	CSTF2T
chr8	140816289	140816349	-	intron-Distal	5.51992	11.10871	HepG2	FAM120A
chr8	140815333	140815352	-	intron-Distal	4.75168	3.71677	HepG2	HNRNPL
chr8	141192124	141192223	-	intron-Distal	3.06722	3.26524	K562	SAFB2
chr8	141355233	141355295	-	intron-Distal	4.35684	4.70434	HepG2	RBFOX2
chr8	140884203	140884251	-	intron-Distal	3.97102	5.82272	HepG2	HNRNPL
chr8	140884099	140884183	-	intron-Distal	4.15085	6.36202	HepG2	AGGF1
chr8	140803566	140803759	-	intron-Distal	3.98593	3.08314	K562	TARDBP
chr8	140843642	140843681	-	intron-Distal	3.32819	3.47685	K562	EIF4G2
chr8	140801849	140801910	-	intron-Distal	3.00511	4.27427	HepG2	CSTF2T
chr8	140914265	140914390	-	intron-Distal	3.27238	3.68431	K562	TARDBP
chr8	140850792	140850867	-	intron-Distal	3.89420	3.90201	K562	SLTM
chr8	140815024	140815123	-	intron-Distal	6.13318	19.54080	HepG2	AGGF1
chr8	141121136	141121311	-	intron-Distal	4.99185	5.44484	K562	RBFOX2
chr8	140814922	140814977	-	intron-Distal	3.40701	4.64655	K562	HNRNPL
chr8	140813183	140813270	-	intron-Distal	5.14697	6.03756	HepG2	FAM120A
chr8	140864392	140864448	-	intron-Distal	3.47916	3.01707	K562	SLTM
chr8	140814938	140814995	-	intron-Distal	3.13344	3.15890	HepG2	GTF2F1
chr8	141205506	141205593	-	intron-Distal	5.08450	4.52011	K562	HNRNPM
chr8	141108596	141108682	-	intron-Distal	5.19014	13.30702	K562	SLTM
chr8	140886613	140886677	-	intron-Distal	3.94668	3.76710	K562	NONO
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for TRAPPC9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TRAPPC9 is not available on ENCORE database.
46 RBPs can affect the levels of TRAPPC9.

The Knockdown/knockout RNA-Seq assay for TRAPPC9 is not available on ENCORE database.

46 RBPs can affect the gene expression of TRAPPC9 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TRAPPC9	ENSG00000167632.10	552.86440	288.04220	0.94050	7.16010	6.34890	HepG2	AKAP1
TRAPPC9	ENSG00000167632.10	433.92370	293.98930	0.56160	3.13370	2.02600	HepG2	AKAP8
TRAPPC9	ENSG00000167632.10	525.81390	370.93600	0.50330	4.35770	3.53060	HepG2	AUH
TRAPPC9	ENSG00000167632.10	354.35310	267.76170	0.40410	2.55650	1.91260	HepG2	CKAP4
TRAPPC9	ENSG00000167632.10	533.26600	275.87860	0.95070	8.17620	7.15200	HepG2	DDX3X
TRAPPC9	ENSG00000167632.10	323.94270	425.89180	-0.39470	2.74800	2.14910	HepG2	ETF1
TRAPPC9	ENSG00000167632.10	219.06400	148.28900	0.56280	2.55060	1.43030	HepG2	FAM120A
TRAPPC9	ENSG00000167632.10	580.99770	303.94450	0.93460	7.09470	5.92180	HepG2	FIP1L1
TRAPPC9	ENSG00000167632.10	345.90980	235.65420	0.55360	2.74450	2.08130	HepG2	G3BP1
TRAPPC9	ENSG00000167632.10	387.54860	238.80620	0.69840	4.36270	3.50230	HepG2	HNRNPK
TRAPPC9	ENSG00000167632.10	392.06790	219.59760	0.83610	8.61260	7.58710	HepG2	HNRNPU
TRAPPC9	ENSG00000167632.10	285.20980	173.55010	0.71660	2.60250	1.58000	HepG2	METAP2
TRAPPC9	ENSG00000167632.10	568.62920	261.60860	1.12000	10.91090	9.69390	HepG2	NCBP2
TRAPPC9	ENSG00000167632.10	120.36480	214.79560	-0.83560	3.26710	2.29850	HepG2	PABPC1
TRAPPC9	ENSG00000167632.10	448.25000	248.84250	0.84900	8.97220	8.09990	HepG2	PTBP1
TRAPPC9	ENSG00000167632.10	436.72980	272.82900	0.67860	6.76740	5.87710	HepG2	PUS1
TRAPPC9	ENSG00000167632.10	481.64720	269.48700	0.83770	8.28190	7.28900	HepG2	QKI
TRAPPC9	ENSG00000167632.10	253.45170	351.52470	-0.47190	2.20720	1.58790	HepG2	RPLP0
TRAPPC9	ENSG00000167632.10	363.41040	202.43960	0.84400	5.28980	3.93970	HepG2	SMNDC1
TRAPPC9	ENSG00000167632.10	527.95160	402.04670	0.39290	2.77210	2.27010	HepG2	SRFBP1
TRAPPC9	ENSG00000167632.10	161.66270	219.99930	-0.44450	2.05610	1.56580	HepG2	SRSF9
TRAPPC9	ENSG00000167632.10	453.22440	320.98940	0.49760	3.83040	3.11990	HepG2	SUCLG1
TRAPPC9	ENSG00000167632.10	84.60120	221.34080	-1.38750	8.09130	7.03160	HepG2	SUPV3L1
TRAPPC9	ENSG00000167632.10	284.77220	213.42020	0.41600	1.96650	1.52990	HepG2	TIAL1
TRAPPC9	ENSG00000167632.10	460.13670	277.36900	0.73020	7.94990	6.86710	HepG2	UPF1
TRAPPC9	ENSG00000167632.10	167.49990	260.63920	-0.63790	4.02530	3.23910	HepG2	ZC3H8
TRAPPC9	ENSG00000167632.10	461.56220	305.05270	0.59740	6.03860	5.31240	HepG2	ZNF622
TRAPPC9	ENSG00000167632.10	255.22600	534.94580	-1.06760	10.05850	9.04620	K562	AQR
TRAPPC9	ENSG00000167632.10	894.92120	708.77390	0.33630	2.98680	2.04000	K562	ATP5C1
TRAPPC9	ENSG00000167632.10	670.28980	874.81130	-0.38420	3.26390	2.20540	K562	CELF1
TRAPPC9	ENSG00000167632.10	522.17010	398.82300	0.38870	2.55280	1.55320	K562	DDX3X
TRAPPC9	ENSG00000167632.10	463.20410	320.92430	0.52930	2.58390	1.35000	K562	EEF2
TRAPPC9	ENSG00000167632.10	594.51190	339.98820	0.80610	9.69810	8.47660	K562	EIF2S2
TRAPPC9	ENSG00000167632.10	290.02820	416.68090	-0.52270	3.27240	2.38320	K562	EIF4A3
TRAPPC9	ENSG00000167632.10	413.31410	299.93680	0.46250	2.60300	1.78120	K562	FIP1L1
TRAPPC9	ENSG00000167632.10	237.73500	433.33220	-0.86610	8.81000	7.80390	K562	FXR1
TRAPPC9	ENSG00000167632.10	130.91110	267.18880	-1.02930	6.08220	4.94620	K562	G3BP2
TRAPPC9	ENSG00000167632.10	618.44880	392.30410	0.65660	2.48330	1.34640	K562	HNRNPA2B1
TRAPPC9	ENSG00000167632.10	207.83630	329.80330	-0.66620	4.07020	3.36310	K562	HNRNPC
TRAPPC9	ENSG00000167632.10	155.57360	246.69820	-0.66510	2.97520	2.00680	K562	HNRNPM
TRAPPC9	ENSG00000167632.10	268.61730	393.68760	-0.55150	3.88940	2.88490	K562	MAGOH
TRAPPC9	ENSG00000167632.10	589.46760	343.13430	0.78050	3.24200	2.14640	K562	PABPN1
TRAPPC9	ENSG00000167632.10	163.04390	301.72820	-0.88800	5.39980	4.34750	K562	PRPF8
TRAPPC9	ENSG00000167632.10	541.52580	776.14910	-0.51930	4.63910	3.58610	K562	PUF60
TRAPPC9	ENSG00000167632.10	659.97040	825.66920	-0.32320	2.49680	1.48620	K562	PUM1
TRAPPC9	ENSG00000167632.10	881.05610	669.90740	0.39520	2.37710	1.86520	K562	PUS1
TRAPPC9	ENSG00000167632.10	277.75670	375.00320	-0.43310	2.36020	1.69920	K562	SRSF1
TRAPPC9	ENSG00000167632.10	174.58600	292.11150	-0.74260	3.97070	2.73750	K562	SUPV3L1
TRAPPC9	ENSG00000167632.10	436.26720	302.27280	0.52930	3.22250	2.18410	K562	TRIM56
TRAPPC9	ENSG00000167632.10	181.23240	267.32230	-0.56070	3.10560	2.25440	K562	U2AF2
TRAPPC9	ENSG00000167632.10	729.55060	608.20060	0.26240	1.99340	1.37700	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TRAPPC9 is not available on ENCORE database.

1 RBPs can affect the splicing of TRAPPC9 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	TRAPPC9	ENSG00000167632.10	chr8	-	141436713	141436740			141415675	141415797	141445210	141445339	0.54100	0.00051	0.04274	included	HepG2	DDX3X

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TRAPPC9

General Information

Functions

Localization

Domains (AlphaFold: TRAPPC9)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TRAPPC9 is not avaliable on ENCORE database.

36 proteins are bound to TRAPPC9 RNA:

eCLIP assay for TRAPPC9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TRAPPC9 is not available on ENCORE database.

46 RBPs can affect the gene expression of TRAPPC9 :

The Knockdown/knockout RNA-Seq assay for TRAPPC9 is not available on ENCORE database.

1 RBPs can affect the splicing of TRAPPC9 :

The Knockdown/knockout RNA-Seq assay for TRAPPC9 is not avaliable on ENCORE database.