STX12

General Information

Gene Name       : STX12
Gene ID             : ENSG00000117758.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: STX12)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878STX12ENSG00000117758.1328.1023.8425.97ENCSR000AEF
HepG2STX12ENSG00000117758.136.0010.008.00ENCSR985KAT
K562STX12ENSG00000117758.1319.4521.0820.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for STX12 is not avaliable on ENCORE database.



Proteins bound to RNA
  • STX12 RNA is bound by 8 proteins.  







eCLIP assay for STX12 is not avaliable on ENCORE database.





8 proteins are bound to STX12 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12814985428149925+3'-UTR3.701674.21741K562PUM2
chr12814967428149740+3'-UTR3.983695.01572HepG2SUB1
chr12815017628150236+3'-UTR3.549024.14747K562FAM120A
chr12813869828138786+CDS,intron-Proximal3.326034.86973K562UCHL5
chr12814436128144384+CDS,intron-Proximal4.205794.10264K562ZNF622
chr12812830028128366+CDS,intron-Proximal4.580594.96013K562PRPF8
chr12812818728128232+CDS,intron-Proximal4.152337.48753K562ZNF622
chr12813873028138780+CDS,intron-Proximal4.679565.59615K562ZNF622
chr12814442428144534+CDS,intron-Proximal3.775118.10412K562PRPF8
chr12811989428119960+intron-Distal,intron-Proximal3.140874.10307K562TIA1
chr12811617628116289+intron-Distal,intron-Proximal5.690868.99051K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for STX12 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for STX12 is not available on ENCORE database.

  • 75 RBPs can affect the levels of STX12.  








The Knockdown/knockout RNA-Seq assay for STX12 is not available on ENCORE database.





75 RBPs can affect the gene expression of STX12 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
STX12ENSG00000117758.9410.85680282.205400.541803.208802.06200HepG2AATF
STX12ENSG00000117758.9601.73370430.680600.482404.920504.15380HepG2ACO1
STX12ENSG00000117758.91039.46090684.739300.602104.513003.85550HepG2AKAP1
STX12ENSG00000117758.9709.38150514.391600.463602.990501.91310HepG2AKAP8
STX12ENSG00000117758.9628.38630432.617500.538505.727904.66030HepG2AKAP8L
STX12ENSG00000117758.9833.40140566.572400.556704.320303.34710HepG2ASCC1
STX12ENSG00000117758.9934.90220591.930900.6593010.022008.85090HepG2AUH
STX12ENSG00000117758.9485.84930327.271400.569903.382402.39120HepG2BCLAF1
STX12ENSG00000117758.9959.08500439.825801.1246017.8816016.55620HepG2BOP1
STX12ENSG00000117758.9714.47780411.359500.796409.332808.04000HepG2CALR
STX12ENSG00000117758.9788.30040538.280200.550304.246003.30120HepG2CIRBP
STX12ENSG00000117758.9538.19380430.482900.322102.419401.78910HepG2CKAP4
STX12ENSG00000117758.9453.04710288.842500.649303.501401.90010HepG2CSTF2T
STX12ENSG00000117758.9821.65970546.264200.588807.278106.32930HepG2CELF1
STX12ENSG00000117758.9466.25300311.600200.581303.950603.15320HepG2DDX21
STX12ENSG00000117758.9504.37060304.724100.726906.292004.91850HepG2DDX24
STX12ENSG00000117758.9516.68990346.491200.576403.245001.85870HepG2DDX27
STX12ENSG00000117758.9157.20080280.53820-0.835604.526102.77440HepG2DDX28
STX12ENSG00000117758.9602.01360449.843000.420302.626201.63760HepG2DDX5
STX12ENSG00000117758.9236.82280337.26250-0.510103.443702.73030HepG2DNAJC2
STX12ENSG00000117758.9435.99960286.768800.604302.941901.79480HepG2AGO1
STX12ENSG00000117758.9364.91630270.548600.431602.169401.35940HepG2EIF3D
STX12ENSG00000117758.9786.90750598.639400.394402.231901.65590HepG2EIF4A3
STX12ENSG00000117758.9851.13100582.821900.546203.130702.40180HepG2EIF4B
STX12ENSG00000117758.9892.36120679.612600.392803.993003.29320HepG2ETF1
STX12ENSG00000117758.9884.31880468.281500.917108.337307.08200HepG2FIP1L1
STX12ENSG00000117758.9833.28730457.766300.864108.556207.47240HepG2GPKOW
STX12ENSG00000117758.9369.13850539.84020-0.548405.259504.04030HepG2HNRNPA2B1
STX12ENSG00000117758.9572.49580382.162700.583003.208702.46890HepG2HNRNPC
STX12ENSG00000117758.9414.79320567.25770-0.451602.693402.00370HepG2HNRNPK
STX12ENSG00000117758.9819.57090436.851900.9076010.224509.10250HepG2HNRNPLL
STX12ENSG00000117758.9744.74870569.520000.386902.282401.66270HepG2IGF2BP2
STX12ENSG00000117758.9588.35190387.791100.601306.775105.67870HepG2ILF2
STX12ENSG00000117758.9812.88490559.678800.538402.487401.65460HepG2PABPC1
STX12ENSG00000117758.9912.58930553.845800.720406.895705.76410HepG2PABPC4
STX12ENSG00000117758.9164.20890338.61030-1.044108.654007.39910HepG2PPIL4
STX12ENSG00000117758.9186.71450312.17300-0.741505.899404.81370HepG2PRPF4
STX12ENSG00000117758.9630.86550285.681101.1428012.4004010.86140HepG2PRPF8
STX12ENSG00000117758.9685.65040548.207400.322702.667102.12870HepG2PTBP1
STX12ENSG00000117758.9783.46640590.225100.408504.454003.74110HepG2PUM1
STX12ENSG00000117758.9446.91570589.80880-0.400202.957402.26350HepG2PUM2
STX12ENSG00000117758.9733.84600438.660900.7423011.6577010.54280HepG2PUS1
STX12ENSG00000117758.9808.47110593.656700.445504.151203.40790HepG2QKI
STX12ENSG00000117758.91089.29680568.031000.9393018.5804017.47980HepG2RBM22
STX12ENSG00000117758.9664.01060538.806300.301301.871301.30810HepG2RBM25
STX12ENSG00000117758.9583.42520407.840400.516402.478501.58420HepG2RPS10
STX12ENSG00000117758.9354.49520263.252700.429202.202501.64730HepG2RPS19
STX12ENSG00000117758.9558.51610403.123100.470302.850702.03890HepG2RPS2
STX12ENSG00000117758.9496.12460282.599900.811805.770204.67530HepG2RRP9
STX12ENSG00000117758.9357.98850264.219900.438102.152001.31940HepG2SERBP1
STX12ENSG00000117758.9711.18040570.699600.317402.494201.92860HepG2SF3B4
STX12ENSG00000117758.91059.07640481.131601.1382010.603209.08250HepG2SNRNP70
STX12ENSG00000117758.91053.57070641.571400.7155013.1310012.25540HepG2SRFBP1
STX12ENSG00000117758.91134.37130595.709300.9291020.5478019.51070HepG2SRSF1
STX12ENSG00000117758.9667.35190548.968700.281601.861401.33400HepG2SRSF5
STX12ENSG00000117758.9601.53920484.660600.311602.484101.95460HepG2SRSF9
STX12ENSG00000117758.9674.25200557.038000.275402.072101.61220HepG2SSB
STX12ENSG00000117758.9749.63410534.760000.487202.871701.74740HepG2STIP1
STX12ENSG00000117758.9573.95330387.962100.564902.644001.47130HepG2SUB1
STX12ENSG00000117758.9544.45910316.120500.784207.785406.26440HepG2SUPT6H
STX12ENSG00000117758.9894.01960368.638001.2780015.7900014.40480HepG2SUPV3L1
STX12ENSG00000117758.9820.19350368.971601.1524020.5867019.45540HepG2TIAL1
STX12ENSG00000117758.9606.69340427.313700.505605.355904.43500HepG2UPF1
STX12ENSG00000117758.9633.03630308.084501.0389018.2653016.80750HepG2ZC3H8
STX12ENSG00000117758.9988.52950469.962401.0726029.3561028.06030HepG2ZNF622
STX12ENSG00000117758.91609.165501268.212900.343402.436301.87950K562AQR
STX12ENSG00000117758.91187.77450725.324400.711507.931306.42200K562BOP1
STX12ENSG00000117758.92286.352301819.618700.329303.420502.33450K562CELF1
STX12ENSG00000117758.9521.08660777.93090-0.578106.632805.41430K562EIF3G
STX12ENSG00000117758.9708.94910930.29300-0.392003.151601.59580K562G3BP1
STX12ENSG00000117758.91184.01380816.682400.535703.660302.82190K562G3BP2
STX12ENSG00000117758.9823.34560636.660200.370902.687302.09770K562HNRNPC
STX12ENSG00000117758.9588.76530972.93500-0.724706.229204.42870K562IGF2BP2
STX12ENSG00000117758.9861.86970628.723200.454902.471301.59330K562KRR1
STX12ENSG00000117758.9777.419901022.64300-0.395503.403602.46540K562MAGOH
STX12ENSG00000117758.9795.242701020.58760-0.359903.005602.04000K562MATR3
STX12ENSG00000117758.9697.00260909.92210-0.384602.852301.85930K562PCBP2
STX12ENSG00000117758.92036.447801614.551000.334802.812601.98930K562PUF60
STX12ENSG00000117758.92104.571101717.425100.293202.683701.63440K562PUM1
STX12ENSG00000117758.9831.14370590.961800.491903.411402.50190K562RPS19
STX12ENSG00000117758.9770.94190950.88850-0.302702.196101.47380K562TIA1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for STX12 is not available on ENCORE database.





5 RBPs can affect the splicing of STX12 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESTX12ENSG00000117758.9chr1+281367562813680028128168281283262813867328138824-0.094000.001390.01614excludedK562AQR
SESTX12ENSG00000117758.9chr1+2813850228138571281367562813680028138673281387790.057000.000040.01638includedK562SBDS
A3SSSTX12ENSG00000117758.9chr1+2812816828128326281281882812832628120043281201430.053000.002080.01335longerK562AQR
MXESTX12ENSG00000117758.9chr1+28128188281283262813675628136800281200432812014328138673281387790.191000.000950.058441includedK562LARP4
MXESTX12ENSG00000117758.9chr1+28128188281283262813675628136800281200432812014328138673281387790.165000.006100.062721includedK562DROSHA
MXESTX12ENSG00000117758.9chr1+28128188281283262813675628136800281200432812014328138673281387790.194000.000930.022261includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for STX12 is not avaliable on ENCORE database.