STRIP1

General Information

Gene Name       : STRIP1
Gene ID             : ENSG00000143093.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: STRIP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878STRIP1ENSG00000143093.149.0313.1711.10ENCSR000AEF
HepG2STRIP1ENSG00000143093.1419.8616.7218.29ENCSR985KAT
K562STRIP1ENSG00000143093.1422.1321.6321.88ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for STRIP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • STRIP1 RNA is bound by 21 proteins.  







eCLIP assay for STRIP1 is not avaliable on ENCORE database.





21 proteins are bound to STRIP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1110590346110590426+3'-UTR,CDS,intron-Proximal3.628276.31501K562SF3B4
chr1110590207110590273+3'-UTR,CDS,intron-Proximal4.353013.93614HepG2AQR
chr1110587405110587485+3'-UTR,CDS,intron-Proximal4.391136.11702K562SF3B4
chr1110587637110587672+3'-UTR,CDS4.694135.82303K562BUD13
chr1110587427110587497+3'-UTR,CDS,intron-Proximal4.7046212.86643K562AQR
chr1110597176110597247+3'-UTR3.575784.70224K562KHSRP
chr1110597021110597110+3'-UTR3.349214.26467K562UPF1
chr1110587439110587520+3'-UTR,CDS,intron-Proximal3.882233.19080K562U2AF2
chr1110594293110594343+3'-UTR,CDS,intron-Proximal4.864645.82303K562BUD13
chr1110592180110592242+3'-UTR,CDS,intron-Proximal5.015195.60100HepG2PRPF8
chr1110590202110590207+3'-UTR,CDS4.234653.43980K562ZNF622
chr1110593024110593070+3'-UTR,CDS,intron-Proximal4.560866.99120K562AQR
chr1110597167110597231+3'-UTR4.644195.25389K562UPF1
chr1110593622110593679+3'-UTR,CDS4.531736.25151K562DDX24
chr1110596390110596442+3'-UTR,CDS3.393963.93645HepG2PPIG
chr1110592881110592972+3'-UTR,CDS,intron-Proximal3.7160912.69454K562SF3B4
chr1110587505110587525+3'-UTR,CDS3.335203.50696K562BUD13
chr1110590345110590401+3'-UTR,CDS,intron-Proximal5.270968.74981HepG2SF3B4
chr1110593681110593756+3'-UTR,CDS,intron-Proximal4.568119.40826K562AQR
chr1110597122110597187+3'-UTR5.4881621.63333K562PUM2
chr1110592931110592984+3'-UTR,CDS,intron-Proximal3.927897.79506K562AQR
chr1110596290110596322+3'-UTR,CDS4.272434.23351K562BUD13
chr1110597187110597231+3'-UTR5.4092515.21006K562PUM2
chr1110590457110590496+3'-UTR,CDS,intron-Proximal3.620824.76274K562UCHL5
chr1110592965110593031+3'-UTR,CDS4.1765310.72269HepG2PPIG
chr1110593648110593681+3'-UTR,CDS3.428104.22563K562UCHL5
chr1110590235110590251+3'-UTR,CDS,intron-Proximal3.955284.45914HepG2PRPF8
chr1110586407110586477+5'-UTR,CDS3.504104.89070K562UCHL5
chr1110585834110585896+5'-UTR,CDS,intron-Proximal3.432974.23869K562GRWD1
chr1110586477110586488+5'-UTR,CDS,intron-Proximal5.8908323.38793K562AQR
chr1110584194110584263+5'-UTR,CDS4.121687.23632K562UCHL5
chr1110584392110584466+5'-UTR,CDS3.151034.99353K562LIN28B
chr1110583296110583315+5'-UTR,CDS4.173684.08604HepG2PPIG
chr1110583258110583326+5'-UTR,CDS,intron-Proximal5.796997.63756K562DDX24
chr1110586202110586273+5'-UTR,CDS,intron-Proximal3.784694.57435K562SF3B4
chr1110584177110584264+5'-UTR,CDS3.015605.80035HepG2PPIG
chr1110586198110586273+5'-UTR,CDS,intron-Proximal4.128264.07325HepG2SF3B4
chr1110584477110584553+5'-UTR,CDS,intron-Proximal3.834663.88924K562PRPF8
chr1110584190110584262+5'-UTR,CDS3.413635.15500HepG2BCLAF1
chr1110585814110585892+5'-UTR,CDS3.156314.73488HepG2GRWD1
chr1110583221110583296+5'-UTR,CDS,intron-Proximal3.506436.06585K562SF3B4
chr1110577235110577342+5'-UTR,CDS,intron-Distal3.390814.02244HepG2NCBP2
chr1110586304110586400+5'-UTR,CDS4.0085411.62230K562UCHL5
chr1110584208110584266+5'-UTR,CDS,intron-Proximal4.442335.82083HepG2GRWD1
chr1110586421110586479+5'-UTR,CDS,intron-Proximal3.138483.50639HepG2PPIG
chr1110586327110586407+5'-UTR,CDS3.262553.10677K562SRSF1
chr1110584468110584558+5'-UTR,CDS,intron-Proximal4.517358.11807HepG2PRPF8
chr1110586282110586398+5'-UTR,CDS4.535055.18972HepG2GRWD1
chr1110584355110584380+5'-UTR,CDS,intron-Proximal4.463304.42734K562UCHL5
chr1110580555110580615+5'-UTR,CDS,intron-Proximal4.5408218.46417HepG2PRPF8
chr1110581342110581449+CDS,intron-Proximal3.600918.33653K562PRPF8
chr1110581341110581381+CDS,intron-Proximal3.385485.58370HepG2PPIG
chr1110581839110581883+CDS3.117364.30396K562UCHL5
chr1110581824110581919+CDS4.516685.46067K562SRSF1
chr1110581807110581882+CDS3.498115.35682HepG2GRWD1
chr1110587731110587819+intron-Distal,intron-Proximal3.644316.38859K562EFTUD2
chr1110600152110600215+intron-Distal4.045443.90287K562LIN28B
chr1110587067110587105+intron-Distal4.892345.17615K562AQR
chr1110580750110580769+intron-Distal4.740674.72162K562KHSRP
chr1110577496110577563+intron-Distal,intron-Proximal5.165925.24235HepG2EFTUD2
chr1110582206110582275+intron-Distal,intron-Proximal5.232094.83371K562EFTUD2
chr1110590041110590124+intron-Distal,intron-Proximal4.473064.96658K562KHSRP
chr1110580788110580844+intron-Distal3.428194.97118HepG2U2AF2
chr1110577649110577706+intron-Distal4.736515.19274K562XRN2
chr1110603557110603651+intron-Distal3.357868.43762HepG2RBFOX2
chr1110603569110603642+intron-Distal4.274424.80493K562RBFOX2
chr1110586488110586522+intron-Proximal7.0442825.18777K562AQR
chr1110581721110581782+intron-Proximal3.120453.80520HepG2RBM5
chr1110585918110585930+intron-Proximal6.0099212.10660K562AQR
chr1110581404110581448+intron-Proximal4.392644.20763HepG2U2AF2
chr1110585676110585694+intron-Proximal5.284597.23718K562AQR
chr1110584483110584527+intron-Proximal3.942347.30031K562AQR
chr1110592182110592192+intron-Proximal4.645828.01338K562AQR
chr1110585892110585918+intron-Proximal4.4544110.81562K562AQR
chr1110590251110590280+intron-Proximal4.641263.37645HepG2PRPF8
chr1110592192110592233+intron-Proximal5.1679511.65116K562AQR
chr1110581387110581422+intron-Proximal4.049855.47926K562AQR
chr1110592878110592899+intron-Proximal3.062584.67783HepG2SF3B4
chr1110586482110586538+intron-Proximal3.011483.20348K562PRPF8
chr1110592899110592930+intron-Proximal3.379515.60181HepG2SF3B4
chr1110590254110590279+intron-Proximal5.292566.22530K562AQR
chr1110590238110590254+intron-Proximal5.145825.17615K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for STRIP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for STRIP1 is not available on ENCORE database.

  • 56 RBPs can affect the levels of STRIP1.  








The Knockdown/knockout RNA-Seq assay for STRIP1 is not available on ENCORE database.





56 RBPs can affect the gene expression of STRIP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
STRIP1ENSG00000143093.10998.65090767.668600.379402.314101.44960HepG2ABCF1
STRIP1ENSG00000143093.10893.34650679.940600.393704.535703.79400HepG2ACO1
STRIP1ENSG00000143093.101188.70120835.095400.509303.532602.94090HepG2AKAP1
STRIP1ENSG00000143093.10957.40410690.959100.470403.431602.55780HepG2ASCC1
STRIP1ENSG00000143093.101366.467101057.965700.369104.488003.64980HepG2AUH
STRIP1ENSG00000143093.10618.51130464.572900.412802.636902.05110HepG2BOP1
STRIP1ENSG00000143093.101001.64710656.462600.609505.572704.49870HepG2CIRBP
STRIP1ENSG00000143093.10876.20240727.093300.269002.099601.52690HepG2CELF1
STRIP1ENSG00000143093.10749.59060525.260400.513004.253503.43030HepG2DDX21
STRIP1ENSG00000143093.101088.41420799.931900.444203.146602.48390HepG2DDX3X
STRIP1ENSG00000143093.10778.55910582.368400.418803.367502.07170HepG2EIF2S2
STRIP1ENSG00000143093.101056.38450710.803100.571503.573802.79630HepG2EIF4B
STRIP1ENSG00000143093.101939.453601214.737700.6749014.9733013.75430HepG2ETF1
STRIP1ENSG00000143093.10620.40620488.111000.345902.108601.41440HepG2FUBP3
STRIP1ENSG00000143093.10957.29080725.444600.400002.652401.78190HepG2G3BP2
STRIP1ENSG00000143093.10801.70370649.123900.304502.707801.73870HepG2HDGF
STRIP1ENSG00000143093.10719.46660492.847100.545704.476803.68070HepG2HNRNPA1
STRIP1ENSG00000143093.10697.58610548.195000.347602.051301.44390HepG2HNRNPC
STRIP1ENSG00000143093.101054.13090691.987100.607105.905004.91390HepG2HNRNPK
STRIP1ENSG00000143093.10620.28610461.393300.426802.519101.91420HepG2HNRNPLL
STRIP1ENSG00000143093.10834.97200544.571200.616509.027507.97980HepG2HNRNPU
STRIP1ENSG00000143093.10998.10030694.516000.523104.190303.37470HepG2IGF2BP2
STRIP1ENSG00000143093.10986.60840756.841600.382402.010301.31030HepG2LARP4
STRIP1ENSG00000143093.10958.48790740.985000.371202.063801.51330HepG2MATR3
STRIP1ENSG00000143093.101100.08520758.427500.536404.180003.40690HepG2NCBP2
STRIP1ENSG00000143093.10639.02380775.26410-0.278801.994101.34390HepG2NOL12
STRIP1ENSG00000143093.10742.89850491.352000.596302.383201.37380HepG2NONO
STRIP1ENSG00000143093.10407.49570582.04480-0.514302.163901.39360HepG2PABPC1
STRIP1ENSG00000143093.10778.49210655.990600.246901.847501.33420HepG2PCBP1
STRIP1ENSG00000143093.10831.31320667.502800.316502.950102.38880HepG2PTBP1
STRIP1ENSG00000143093.10541.16730740.04880-0.451503.556002.89180HepG2PUF60
STRIP1ENSG00000143093.10985.74150785.016900.328402.592401.94260HepG2PUM2
STRIP1ENSG00000143093.10893.62550692.557600.367604.055603.33530HepG2PUS1
STRIP1ENSG00000143093.10979.92340722.905200.438804.359303.60100HepG2QKI
STRIP1ENSG00000143093.101425.325401015.285200.489307.006606.27130HepG2RBM22
STRIP1ENSG00000143093.10818.92980656.089300.319702.177401.57360HepG2RBM25
STRIP1ENSG00000143093.101038.71940742.860000.483505.925505.18210HepG2NELFE
STRIP1ENSG00000143093.10911.93240691.885000.398304.179703.44280HepG2RECQL
STRIP1ENSG00000143093.10559.31400409.529800.449603.034302.39470HepG2RPS19
STRIP1ENSG00000143093.101329.93470840.787100.661405.051104.12160HepG2SF3A3
STRIP1ENSG00000143093.10896.74830694.942400.367703.559302.90090HepG2SF3B4
STRIP1ENSG00000143093.10938.08920725.375200.370903.845003.31060HepG2SRSF1
STRIP1ENSG00000143093.101095.02570730.678300.583609.289408.23310HepG2SRSF5
STRIP1ENSG00000143093.101234.59570995.581100.310303.478202.91810HepG2SSB
STRIP1ENSG00000143093.101138.98500830.992900.454706.646505.75570HepG2SUCLG1
STRIP1ENSG00000143093.10585.14500449.706000.379702.188101.53230HepG2TARDBP
STRIP1ENSG00000143093.10929.20320663.123600.486603.987103.23900HepG2U2AF1
STRIP1ENSG00000143093.10894.29390719.895000.312902.945102.33030HepG2UTP3
STRIP1ENSG00000143093.101394.31470820.071600.7656021.2230020.05740HepG2ZNF622
STRIP1ENSG00000143093.101603.802001153.420600.475508.196007.29040K562AGGF1
STRIP1ENSG00000143093.101363.725801128.597800.272902.796702.14090K562DDX47
STRIP1ENSG00000143093.10915.70190746.881000.293902.511501.92880K562FXR1
STRIP1ENSG00000143093.10396.40190557.06390-0.490902.022501.43060K562G3BP2
STRIP1ENSG00000143093.101052.452601318.57870-0.325202.390501.68590K562GRSF1
STRIP1ENSG00000143093.101020.66000769.753200.406902.462501.51210K562IGF2BP2
STRIP1ENSG00000143093.101554.570201273.673400.287402.443201.67380K562KIF1C
STRIP1ENSG00000143093.101151.286101822.02510-0.662308.429506.99690K562PUF60
STRIP1ENSG00000143093.101572.151701898.86630-0.272402.792701.82970K562PUM2
STRIP1ENSG00000143093.101646.171501190.194200.467804.692804.00920K562PUS1
STRIP1ENSG00000143093.101536.589201159.724100.405805.083504.30200K562RBM15
STRIP1ENSG00000143093.101039.45840770.139000.432503.974403.13280K562SRSF1
STRIP1ENSG00000143093.10773.831701050.04110-0.440403.142001.79610K562STAU1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for STRIP1 is not available on ENCORE database.





13 RBPs can affect the splicing of STRIP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESTRIP1ENSG00000143093.10chr1+110583256110583325110582016110582137110584157110584264-0.389000.000000.00012excludedK562SF3B4
SESTRIP1ENSG00000143093.10chr1+110591733110591860110590393110590491110592964110593031-0.610000.000000.00000excludedHepG2U2AF1
SESTRIP1ENSG00000143093.10chr1+110589301110589373110587636110587700110590163110590238-0.066000.000720.02423excludedK562AKAP8L
SESTRIP1ENSG00000143093.10chr1+1105893011105893731105876361105877001105901631105902380.077000.000050.00741includedHepG2TBRG4
SESTRIP1ENSG00000143093.10chr1+110586940110587064110586260110586478110587461110587527-0.052000.001940.02467excludedHepG2U2AF2
SESTRIP1ENSG00000143093.10chr1+1105869441105870641105862601105864781105874611105875270.078000.000140.00226includedK562AQR
SESTRIP1ENSG00000143093.10chr1+110586940110587064110586260110586478110587461110587527-0.135000.000420.01997excludedK562FXR1
SESTRIP1ENSG00000143093.10chr1+110589301110589373110587636110587700110590163110590238-0.063000.000230.00495excludedK562PUS1
SESTRIP1ENSG00000143093.10chr1+1105869401105870641105862601105864781105874611105875270.109000.000160.03268includedK562NSUN2
SESTRIP1ENSG00000143093.10chr1+110583256110583325110582016110582137110584157110584264-0.128000.000220.04895excludedK562APOBEC3C
SESTRIP1ENSG00000143093.10chr1+110589301110589373110587636110587700110590163110590238-0.111000.002080.05425excludedHepG2SF3A3
SESTRIP1ENSG00000143093.10chr1+110586940110587001110586260110586478110587461110587527-0.221000.003570.05537excludedK562U2AF2
SESTRIP1ENSG00000143093.10chr1+110592081110592182110590393110590491110592964110593031-0.433000.000000.00001excludedK562U2AF2
SESTRIP1ENSG00000143093.10chr1+110589301110589373110587636110587700110590163110590238-0.058000.000580.01776excludedK562RBM15
SESTRIP1ENSG00000143093.10chr1+1105870011105870641105862601105864781105874611105875270.073000.005180.09569includedK562AGGF1
A3SSSTRIP1ENSG00000143093.10chr1+110591733110593031110592964110593031110590393110590491-0.561000.000000.00004shorterK562U2AF2
A3SSSTRIP1ENSG00000143093.10chr1+110591733110593031110592964110593031110590393110590491-0.405000.000350.02246shorterK562SF3B4
A3SSSTRIP1ENSG00000143093.10chr1+110591733110593031110592964110593031110590393110590491-0.613000.000000.00001shorterHepG2U2AF1
A5SSSTRIP1ENSG00000143093.10chr1+1105903931105905661105903931105904911105917331105918600.192000.000020.00065longerK562AQR
A5SSSTRIP1ENSG00000143093.10chr1+1105929641105931691105929641105930311105935771105936820.098000.000000.00000longerK562AQR
A5SSSTRIP1ENSG00000143093.10chr1+1105929641105931691105929641105930311105935771105936820.063000.000110.01364longerK562AGGF1
MXESTRIP1ENSG00000143093.10chr1+1105893011105893731105901631105902381105874611105875271105903931105904910.060000.002840.022361includedK562AQR
MXESTRIP1ENSG00000143093.10chr1+1105892741105893731105901631105902381105876361105877001105903931105904910.056000.001420.012381includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for STRIP1 is not avaliable on ENCORE database.