STAG3L3

General Information

Gene Name       : STAG3L3
Gene ID             : ENSG00000174353.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: STAG3L3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878STAG3L3ENSG00000174353.1716.9523.7220.34ENCSR000AEF
HepG2STAG3L3ENSG00000174353.1712.5110.1811.34ENCSR985KAT
K562STAG3L3ENSG00000174353.1737.3729.2233.30ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for STAG3L3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • STAG3L3 RNA is bound by 7 proteins.  







eCLIP assay for STAG3L3 is not avaliable on ENCORE database.





7 proteins are bound to STAG3L3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr77246800272468101-intron-Distal3.9448610.84983K562GTF2F1
chr77246800472468044-intron-Distal4.6674611.40582K562HNRNPL
chr77247001772470077-intron-Distal,intron-Proximal3.305334.45064HepG2GRWD1
chr77246799772468039-intron-Distal6.5187022.21286K562AGGF1
chr77246800372468093-intron-Distal4.986588.12741HepG2GTF2F1
chr77244037772440482-intron-Distal4.897996.10679HepG2RBFOX2
chr77246800272468112-intron-Distal4.612103.78681HepG2PCBP2
chr77246804472468124-intron-Distal3.7747116.12223K562HNRNPL
chr77247001872470074-intron-Distal,intron-Proximal3.969376.36347HepG2PPIG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for STAG3L3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for STAG3L3 is not available on ENCORE database.

  • 83 RBPs can affect the levels of STAG3L3.  








The Knockdown/knockout RNA-Seq assay for STAG3L3 is not available on ENCORE database.





83 RBPs can affect the gene expression of STAG3L3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
STAG3L3ENSG00000174353.13179.01310276.49820-0.627204.235303.51330HepG2ACO1
STAG3L3ENSG00000174353.13157.49670246.69240-0.647403.121602.49020HepG2BOP1
STAG3L3ENSG00000174353.13384.09890254.553300.593402.866301.87260HepG2CCAR1
STAG3L3ENSG00000174353.1386.66780158.86310-0.874203.389502.70600HepG2DDX3X
STAG3L3ENSG00000174353.13200.30120136.486000.553301.880501.36140HepG2DDX6
STAG3L3ENSG00000174353.13322.20190131.188101.2962010.353809.25180HepG2EIF2S1
STAG3L3ENSG00000174353.13273.82060144.969100.917405.272004.39020HepG2EIF4A3
STAG3L3ENSG00000174353.13259.35120141.755700.871405.265402.51290HepG2EXOSC5
STAG3L3ENSG00000174353.13256.51550163.131400.652903.305801.40210HepG2EXOSC9
STAG3L3ENSG00000174353.13298.62480146.295701.029306.838105.78130HepG2FXR1
STAG3L3ENSG00000174353.13391.00100135.696001.5267015.4601013.94690HepG2G3BP1
STAG3L3ENSG00000174353.13262.52080144.078000.865504.826003.63650HepG2G3BP2
STAG3L3ENSG00000174353.13235.39320145.402700.694902.815501.69470HepG2GRSF1
STAG3L3ENSG00000174353.13243.05480153.685800.661203.152102.46870HepG2HNRNPA1
STAG3L3ENSG00000174353.13313.76140170.950100.876005.645904.68310HepG2HNRNPC
STAG3L3ENSG00000174353.13293.00680228.667000.357601.908301.30530HepG2HNRNPF
STAG3L3ENSG00000174353.13356.25970137.438901.3740011.5834010.24830HepG2HNRNPK
STAG3L3ENSG00000174353.13332.64450223.525800.573404.184503.36820HepG2HNRNPL
STAG3L3ENSG00000174353.13333.17990244.996300.443401.920001.38720HepG2HNRNPLL
STAG3L3ENSG00000174353.13272.25930169.819600.680904.639003.87110HepG2HNRNPU
STAG3L3ENSG00000174353.13266.91790137.926800.952405.586604.65850HepG2IGF2BP2
STAG3L3ENSG00000174353.13279.39670129.459501.109703.637102.50890HepG2IGF2BP3
STAG3L3ENSG00000174353.13331.09170138.740601.254708.684506.82630HepG2KHSRP
STAG3L3ENSG00000174353.13287.22670146.346900.972706.012505.05620HepG2MAGOH
STAG3L3ENSG00000174353.13333.94340150.624201.148508.404007.32990HepG2NCBP2
STAG3L3ENSG00000174353.13199.49240112.590100.825204.650203.89750HepG2PCBP1
STAG3L3ENSG00000174353.13277.31650114.560401.2753011.5535010.58690HepG2PTBP1
STAG3L3ENSG00000174353.13343.79040246.560400.479503.253102.62090HepG2PUM1
STAG3L3ENSG00000174353.13310.81420124.080701.3247012.0806010.91060HepG2QKI
STAG3L3ENSG00000174353.13252.24700335.06950-0.409601.913701.46190HepG2RBM22
STAG3L3ENSG00000174353.13322.92790112.607801.5198015.4444013.92110HepG2RBM25
STAG3L3ENSG00000174353.13346.95330127.498201.4442015.4295014.34690HepG2NELFE
STAG3L3ENSG00000174353.13268.16580118.740901.175209.500508.46060HepG2RECQL
STAG3L3ENSG00000174353.13242.75940375.94920-0.631003.376002.62960HepG2SF3A3
STAG3L3ENSG00000174353.13277.03010119.279701.2156010.214309.18560HepG2SF3B4
STAG3L3ENSG00000174353.13265.60600378.45920-0.510803.619303.06980HepG2SRFBP1
STAG3L3ENSG00000174353.13199.28330124.499100.678603.099402.60650HepG2SRSF1
STAG3L3ENSG00000174353.13198.59460101.284000.971306.101405.33790HepG2SRSF9
STAG3L3ENSG00000174353.13176.62680111.896100.658402.802902.23950HepG2TAF15
STAG3L3ENSG00000174353.13284.58660102.826401.4686014.7814012.88510HepG2TIA1
STAG3L3ENSG00000174353.13222.36670165.000300.430401.756301.33870HepG2TIAL1
STAG3L3ENSG00000174353.13138.3265088.046200.651602.179201.50480HepG2UCHL5
STAG3L3ENSG00000174353.13250.14990366.68620-0.551804.408903.76050HepG2ZNF622
STAG3L3ENSG00000174353.13419.56960556.71970-0.408002.397301.30510K562AARS
STAG3L3ENSG00000174353.131038.545201279.62630-0.301203.209802.60660K562AGGF1
STAG3L3ENSG00000174353.131056.639001331.49750-0.333602.161401.58120K562AKAP8L
STAG3L3ENSG00000174353.13700.143701139.56050-0.702807.514206.62430K562AQR
STAG3L3ENSG00000174353.13575.25840788.86040-0.455603.199502.26040K562BOP1
STAG3L3ENSG00000174353.131039.102401529.26170-0.557507.881905.88590K562CCDC124
STAG3L3ENSG00000174353.13671.456501346.53220-1.0039027.1805025.34490K562DDX47
STAG3L3ENSG00000174353.131130.148901432.86010-0.342403.164602.21900K562DKC1
STAG3L3ENSG00000174353.13414.37620718.93920-0.794906.106604.19670K562EEF2
STAG3L3ENSG00000174353.13454.65220694.66600-0.611605.090903.83460K562EFTUD2
STAG3L3ENSG00000174353.13800.33230620.103100.368003.426902.06730K562EIF2S1
STAG3L3ENSG00000174353.13484.51300743.82680-0.618404.379303.04320K562EIF3D
STAG3L3ENSG00000174353.13669.30700531.170000.333402.474201.40190K562EIF4B
STAG3L3ENSG00000174353.131196.507701514.15850-0.339704.217903.06580K562EIF4G2
STAG3L3ENSG00000174353.13550.07300723.41830-0.395202.328201.49390K562FTO
STAG3L3ENSG00000174353.13782.43960556.467200.491604.961902.40830K562FUBP3
STAG3L3ENSG00000174353.13412.48700578.55920-0.488102.594101.91330K562G3BP2
STAG3L3ENSG00000174353.13505.44120800.78150-0.663906.782105.54100K562GPKOW
STAG3L3ENSG00000174353.13831.000901144.08310-0.461304.158103.23490K562GRSF1
STAG3L3ENSG00000174353.13555.03270727.41040-0.390202.164601.34560K562HNRNPM
STAG3L3ENSG00000174353.13858.969701198.94380-0.481104.253703.27210K562HSPD1
STAG3L3ENSG00000174353.131044.759801413.09270-0.435704.531403.43560K562KIF1C
STAG3L3ENSG00000174353.13502.14500683.82930-0.445502.258501.42400K562KRR1
STAG3L3ENSG00000174353.13751.79050543.155400.468904.003802.07740K562LSM11
STAG3L3ENSG00000174353.13985.210001352.64410-0.457304.934903.36780K562MAK16
STAG3L3ENSG00000174353.131099.579801583.01500-0.525706.532905.02300K562MBNL1
STAG3L3ENSG00000174353.13420.04180684.35010-0.704205.841603.81590K562NONO
STAG3L3ENSG00000174353.13822.15120599.845200.454703.147601.59680K562NUSAP1
STAG3L3ENSG00000174353.13452.06760728.78100-0.688905.534403.00150K562PA2G4
STAG3L3ENSG00000174353.13485.75340681.72680-0.489003.628502.51110K562PCBP2
STAG3L3ENSG00000174353.13803.70770594.868800.434003.319701.73500K562PHF6
STAG3L3ENSG00000174353.13256.42230675.98880-1.3985018.9637016.98140K562PRPF8
STAG3L3ENSG00000174353.13782.89310546.344200.518904.649203.43230K562PSIP1
STAG3L3ENSG00000174353.131000.546401652.05500-0.723509.796108.23800K562PUF60
STAG3L3ENSG00000174353.13868.227901286.62120-0.567403.629902.96390K562RBM15
STAG3L3ENSG00000174353.13703.53880498.342000.497403.185902.11580K562RCC2
STAG3L3ENSG00000174353.13300.84460688.60690-1.1947013.4861011.65790K562RPS19
STAG3L3ENSG00000174353.13569.04710829.65380-0.544004.043402.80300K562RPS3
STAG3L3ENSG00000174353.13342.11450691.20980-1.014608.654306.37880K562RRP9
STAG3L3ENSG00000174353.13540.54110761.65750-0.494703.179402.13430K562SF3B1
STAG3L3ENSG00000174353.13401.63270729.86190-0.8617010.892509.49670K562SRSF1
STAG3L3ENSG00000174353.13757.06210525.507100.526603.233802.21580K562TIAL1
STAG3L3ENSG00000174353.13750.60870558.142300.427303.090602.08000K562TRIM56
STAG3L3ENSG00000174353.13529.56290692.74720-0.387502.228501.32250K562UCHL5
STAG3L3ENSG00000174353.131407.151701185.909900.246702.468001.78800K562UPF1
STAG3L3ENSG00000174353.13971.575801358.58080-0.483703.643502.25640K562UTP3
STAG3L3ENSG00000174353.13766.339701055.22920-0.461506.670005.40920K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for STAG3L3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of STAG3L3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for STAG3L3 is not avaliable on ENCORE database.