SLC6A11

General Information

Gene Name       : SLC6A11
Gene ID             : ENSG00000132164.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC6A11)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC6A11ENSG00000132164.90.000.000.00ENCSR000AEF
HepG2SLC6A11ENSG00000132164.914.6814.6414.66ENCSR985KAT
K562SLC6A11ENSG00000132164.90.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC6A11 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC6A11 RNA is bound by 15 proteins.  







eCLIP assay for SLC6A11 is not avaliable on ENCORE database.





15 proteins are bound to SLC6A11 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr31098052710980599+3'-UTR5.113576.71037HepG2UPF1
chr31098201810982073+3'-UTR4.245254.94157HepG2IGF2BP1
chr31098024510980291+3'-UTR3.322433.69384HepG2FAM120A
chr31098102410981085+3'-UTR4.399043.19668HepG2UPF1
chr31098174410981836+3'-UTR3.606563.72765HepG2UPF1
chr31086506210865139+3'-UTR,CDS,intron-Proximal3.595303.98203HepG2PRPF8
chr31098083510980864+3'-UTR3.458395.84135HepG2PCBP2
chr31098123410981291+3'-UTR5.5132343.54456HepG2PCBP2
chr31098187610981994+3'-UTR5.004855.67997HepG2UPF1
chr31098217610982241+3'-UTR5.019924.02776HepG2FAM120A
chr31098129110981337+3'-UTR6.0177842.86658HepG2PCBP2
chr31085792110858086+5'-UTR,CDS3.7792316.00064HepG2DDX3X
chr31095387710953923+CDS,intron-Proximal4.133943.86479HepG2PRPF8
chr31088589510885913+CDS,intron-Proximal3.616743.86355HepG2PPIG
chr31096764010967712+CDS,intron-Proximal5.165978.73870HepG2SF3A3
chr31097090110970959+CDS4.466164.08604HepG2PPIG
chr31097580010975853+CDS,intron-Proximal4.609934.06516HepG2SND1
chr31095381110953865+CDS4.487384.65414HepG2SND1
chr31086152910861590+CDS,intron-Proximal3.692817.26133HepG2PRPF8
chr31088598910886033+CDS,intron-Proximal3.578996.51082HepG2PPIG
chr31097475010974845+CDS,intron-Proximal4.134254.24670HepG2SF3B4
chr31091664510916692+CDS,intron-Proximal4.346593.45943HepG2BCLAF1
chr31091529310915433+intron-Distal4.933527.64200HepG2PTBP1
chr31094528710945340+intron-Distal4.257384.50934HepG2RBFOX2
chr31088095410881114+intron-Distal4.497315.59072HepG2HNRNPK
chr31091510410915166+intron-Distal4.062393.03891HepG2PTBP1
chr31091512110915192+intron-Distal3.667967.33240HepG2PCBP2
chr31091544610915575+intron-Distal3.744265.07626HepG2PTBP1
chr31091520110915359+intron-Distal5.3289319.38064HepG2PCBP2
chr31091535910915459+intron-Distal5.737749.83537HepG2PCBP2
chr31096847810968558+intron-Distal4.338234.33022HepG2HNRNPK
chr31096794810968006+intron-Distal4.142073.06084HepG2HNRNPK
chr31088079510880873+intron-Distal4.147353.28841HepG2PTBP1
chr31097691510976965+intron-Proximal4.213497.39116HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC6A11 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC6A11 is not available on ENCORE database.

  • 95 RBPs can affect the levels of SLC6A11.  








The Knockdown/knockout RNA-Seq assay for SLC6A11 is not available on ENCORE database.





95 RBPs can affect the gene expression of SLC6A11 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC6A11ENSG00000132164.52152.57190974.441301.1433037.7941036.17520HepG2ACO1
SLC6A11ENSG00000132164.5823.08140645.901500.349602.191601.30220HepG2ADAR
SLC6A11ENSG00000132164.5526.375001032.06700-0.9714010.306909.34580HepG2AKAP1
SLC6A11ENSG00000132164.51296.45980978.983300.405105.442104.39980HepG2AKAP8L
SLC6A11ENSG00000132164.51213.16060853.908000.506504.156103.20210HepG2ASCC1
SLC6A11ENSG00000132164.51514.397701044.000200.536505.944303.97650HepG2ATP5C1
SLC6A11ENSG00000132164.51343.57630758.204500.825309.308107.78520HepG2BCLAF1
SLC6A11ENSG00000132164.51379.61150884.331100.641507.790606.84920HepG2BOP1
SLC6A11ENSG00000132164.51154.14290866.808300.412903.617402.22040HepG2BUD13
SLC6A11ENSG00000132164.51489.26140746.706800.9959021.6125019.83710HepG2CALR
SLC6A11ENSG00000132164.5703.17450962.58540-0.453002.584701.64580HepG2CCAR1
SLC6A11ENSG00000132164.51227.13160811.284600.596905.759904.67020HepG2CIRBP
SLC6A11ENSG00000132164.51170.64550974.186000.264902.929102.24940HepG2CKAP4
SLC6A11ENSG00000132164.5318.56460494.26310-0.633703.020902.21860HepG2CNOT7
SLC6A11ENSG00000132164.51094.27110811.868500.430603.456102.69530HepG2CPSF6
SLC6A11ENSG00000132164.51470.84300952.760700.626408.138806.33720HepG2CPSF7
SLC6A11ENSG00000132164.5713.12980538.978500.403802.622401.57100HepG2CSTF2
SLC6A11ENSG00000132164.51223.12210906.206800.432605.636004.78000HepG2CELF1
SLC6A11ENSG00000132164.5573.84890974.36230-0.7638015.6899014.17590HepG2DAZAP1
SLC6A11ENSG00000132164.51320.74930901.198600.5513011.116709.66930HepG2DDX19B
SLC6A11ENSG00000132164.51248.65140802.738300.637304.724803.10070HepG2DDX27
SLC6A11ENSG00000132164.5460.68110988.55460-1.1016014.5568013.23410HepG2DDX3X
SLC6A11ENSG00000132164.51346.78140921.934900.546702.727801.75720HepG2DDX59
SLC6A11ENSG00000132164.51189.17610891.709800.415203.275002.18390HepG2DDX5
SLC6A11ENSG00000132164.5912.47720627.300100.540505.186403.86990HepG2DHX30
SLC6A11ENSG00000132164.5492.00250650.38680-0.402603.343602.57570HepG2DNAJC21
SLC6A11ENSG00000132164.5815.92640644.654400.339803.685402.95220HepG2DNAJC2
SLC6A11ENSG00000132164.5812.52330608.176500.417802.611901.71370HepG2EEF2
SLC6A11ENSG00000132164.5725.09040506.974900.516103.778002.47460HepG2EFTUD2
SLC6A11ENSG00000132164.52003.74370902.052201.1513017.5841015.98330HepG2EIF4A3
SLC6A11ENSG00000132164.51513.75530878.463100.785006.696105.65850HepG2EIF4B
SLC6A11ENSG00000132164.5548.82050920.85520-0.746608.167006.80140HepG2EIF4G2
SLC6A11ENSG00000132164.52636.730401239.512401.0889042.8276040.99450HepG2ETF1
SLC6A11ENSG00000132164.52121.99540952.164601.1560029.0961026.71200HepG2EWSR1
SLC6A11ENSG00000132164.51063.84440714.106100.575004.659703.04780HepG2FKBP4
SLC6A11ENSG00000132164.51307.84480911.598500.520604.247602.20330HepG2FMR1
SLC6A11ENSG00000132164.51261.56460896.646500.492504.114303.01910HepG2G3BP2
SLC6A11ENSG00000132164.5588.41010439.557100.420702.348001.53030HepG2GEMIN5
SLC6A11ENSG00000132164.52389.16760920.328301.3762017.7806016.29930HepG2GPKOW
SLC6A11ENSG00000132164.51123.54870930.286100.272202.669101.70690HepG2HDGF
SLC6A11ENSG00000132164.5947.50270656.617800.529004.822104.00120HepG2HNRNPA1
SLC6A11ENSG00000132164.51074.06790895.482600.262202.436201.55120HepG2HNRNPA2B1
SLC6A11ENSG00000132164.51281.81130730.369500.8114011.299409.97710HepG2HNRNPC
SLC6A11ENSG00000132164.5674.59950887.55960-0.395804.796803.92690HepG2HNRNPL
SLC6A11ENSG00000132164.52206.34530878.285101.3288028.9277027.24590HepG2HNRNPLL
SLC6A11ENSG00000132164.5560.91290725.54040-0.371303.514202.83930HepG2HNRNPU
SLC6A11ENSG00000132164.51627.270201132.852100.522407.233506.11240HepG2IGF2BP1
SLC6A11ENSG00000132164.51294.95130858.260000.593305.602704.67350HepG2IGF2BP2
SLC6A11ENSG00000132164.5885.79170741.114900.257202.386501.69860HepG2ILF2
SLC6A11ENSG00000132164.5659.57400937.77660-0.507703.067901.74920HepG2KRR1
SLC6A11ENSG00000132164.52427.368301016.531201.2556019.0012016.82020HepG2LARP4
SLC6A11ENSG00000132164.52612.88900910.751201.5204034.7504032.64370HepG2MAGOH
SLC6A11ENSG00000132164.51858.15210915.799901.0207014.0113012.67170HepG2MATR3
SLC6A11ENSG00000132164.51238.12410895.710300.467002.538301.61360HepG2MTPAP
SLC6A11ENSG00000132164.51067.47780778.759000.454903.616602.76090HepG2NSUN2
SLC6A11ENSG00000132164.5232.15030451.67370-0.960204.364003.23430HepG2PABPC1
SLC6A11ENSG00000132164.5417.84900718.15630-0.7813011.5619010.02250HepG2PARN
SLC6A11ENSG00000132164.51040.85610817.529900.348303.266702.68190HepG2PTBP1
SLC6A11ENSG00000132164.51197.26680922.309900.376303.238102.59960HepG2PUF60
SLC6A11ENSG00000132164.51490.67190979.083200.6064014.8832013.73440HepG2PUM1
SLC6A11ENSG00000132164.51276.96230978.361500.384203.905603.11150HepG2PUM2
SLC6A11ENSG00000132164.51559.94700992.525300.6522015.3455014.10250HepG2PUS1
SLC6A11ENSG00000132164.51049.92670803.621500.385603.106602.39620HepG2RBM25
SLC6A11ENSG00000132164.5581.95780807.55500-0.472603.388102.28450HepG2RBM27
SLC6A11ENSG00000132164.5292.87470477.28840-0.704604.111602.26170HepG2RBM47
SLC6A11ENSG00000132164.5689.22110847.34640-0.298002.493101.90460HepG2RECQL
SLC6A11ENSG00000132164.5855.86530480.397500.8331010.794509.67590HepG2RPS19
SLC6A11ENSG00000132164.51082.51100744.783000.539404.803803.76740HepG2RPS2
SLC6A11ENSG00000132164.5912.69920646.123700.498206.949505.99610HepG2SAFB2
SLC6A11ENSG00000132164.5276.67210467.13480-0.755704.998203.23940HepG2SART3
SLC6A11ENSG00000132164.5647.88560482.121700.426202.607101.69580HepG2SERBP1
SLC6A11ENSG00000132164.51216.31920869.335700.484404.446803.57080HepG2SF3B1
SLC6A11ENSG00000132164.51325.45140851.248700.6387011.2526010.18400HepG2SF3B4
SLC6A11ENSG00000132164.51178.58990884.372900.414206.267105.27850HepG2SLBP
SLC6A11ENSG00000132164.51032.26800753.485900.454106.841905.90020HepG2SMN1
SLC6A11ENSG00000132164.51502.82770967.286000.635604.281403.30210HepG2SNRNP70
SLC6A11ENSG00000132164.5896.286301170.13040-0.384605.141504.51790HepG2SRFBP1
SLC6A11ENSG00000132164.51566.69600888.480700.8182019.7717018.75060HepG2SRSF1
SLC6A11ENSG00000132164.52004.87460910.659201.1384042.9990040.94370HepG2SRSF5
SLC6A11ENSG00000132164.51845.767601130.248500.7075017.6159016.12940HepG2SRSF7
SLC6A11ENSG00000132164.5546.024801015.95360-0.8958019.3416018.24800HepG2SSB
SLC6A11ENSG00000132164.51304.973501035.659700.333403.420402.74270HepG2SUCLG1
SLC6A11ENSG00000132164.51215.89480788.834200.624107.913706.37810HepG2SUPT6H
SLC6A11ENSG00000132164.51492.18060854.064700.804908.677007.58850HepG2SUPV3L1
SLC6A11ENSG00000132164.5300.79100798.49400-1.4085024.9720023.51470HepG2TAF15
SLC6A11ENSG00000132164.51722.70720856.024101.0089017.9557016.39350HepG2TARDBP
SLC6A11ENSG00000132164.5830.93900572.444000.537503.561302.44750HepG2TFIP11
SLC6A11ENSG00000132164.5460.49900733.82090-0.672207.749306.36740HepG2TIA1
SLC6A11ENSG00000132164.51174.37760704.984600.7361011.8008010.89440HepG2TIAL1
SLC6A11ENSG00000132164.51414.26310670.011601.077703.524202.40530HepG2U2AF2
SLC6A11ENSG00000132164.51530.279801223.446800.322704.364303.52040HepG2UPF1
SLC6A11ENSG00000132164.51830.396201257.574700.541403.435602.28250HepG2UTP18
SLC6A11ENSG00000132164.51417.882501181.198400.263402.762202.16590HepG2UTP3
SLC6A11ENSG00000132164.5247.65860444.30880-0.843205.687404.11950HepG2XPO5
SLC6A11ENSG00000132164.5580.36970840.73330-0.534703.970003.10910HepG2XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC6A11 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SLC6A11 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SLC6A11 is not avaliable on ENCORE database.