RRN3P3

General Information

Gene Name       : RRN3P3
Gene ID             : ENSG00000257122.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RRN3P3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RRN3P3ENSG00000257122.54.805.034.92ENCSR000AEF
HepG2RRN3P3ENSG00000257122.54.075.424.75ENCSR985KAT
K562RRN3P3ENSG00000257122.53.693.883.79ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RRN3P3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RRN3P3 RNA is bound by 9 proteins.  







eCLIP assay for RRN3P3 is not avaliable on ENCORE database.





9 proteins are bound to RRN3P3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr162243526722435347-intron-Distal6.158437.91709HepG2DKC1
chr162243277522432813-intron-Distal3.352533.88253HepG2HLTF
chr162243116622431257-intron-Distal4.360859.99793HepG2SLTM
chr162243117522431230-intron-Distal3.297883.31097K562SLTM
chr162243512522435231-intron-Distal4.706343.38582HepG2SRSF7
chr162243526822435359-intron-Distal4.3224613.65130K562TARDBP
chr162243509622435229-intron-Distal6.151598.53168HepG2DKC1
chr162243516322435232-intron-Distal5.1375216.15216K562TARDBP
chr162243525222435322-intron-Distal3.128905.83065HepG2XPO5
chr162243508422435163-intron-Distal5.9318218.21265K562TARDBP
chr162244115122441267-5'-UTR,intron-Distal3.794787.89598HepG2GRWD1
chr162244111322441163-5'-UTR,intron-Distal,intron-Proximal3.025484.85880HepG2PPIG
chr162243140722431445-intron-Distal3.306573.34920HepG2HLTF
chr162243253222432606-intron-Distal3.419645.70060HepG2HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RRN3P3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RRN3P3 is not available on ENCORE database.

  • 64 RBPs can affect the levels of RRN3P3.  








The Knockdown/knockout RNA-Seq assay for RRN3P3 is not available on ENCORE database.





64 RBPs can affect the gene expression of RRN3P3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RRN3P3ENSG00000257122.1247.78010153.888700.687102.617801.70200HepG2ABCF1
RRN3P3ENSG00000257122.1259.41600173.088600.583703.540902.86850HepG2ACO1
RRN3P3ENSG00000257122.1244.43410173.918200.490902.505701.77170HepG2AKAP8L
RRN3P3ENSG00000257122.1324.50660182.131900.833206.553105.64400HepG2CELF1
RRN3P3ENSG00000257122.1108.09610195.89690-0.857805.556504.55580HepG2DAZAP1
RRN3P3ENSG00000257122.1204.08740122.005000.742103.495602.74100HepG2DDX21
RRN3P3ENSG00000257122.1253.91130145.164200.806503.596602.73010HepG2DDX55
RRN3P3ENSG00000257122.1337.50490200.449900.751603.154902.11110HepG2DDX59
RRN3P3ENSG00000257122.1206.85570116.710700.825603.898302.51520HepG2EIF2S2
RRN3P3ENSG00000257122.1164.39940102.632600.679602.387601.79290HepG2EIF4A3
RRN3P3ENSG00000257122.1203.0604099.867701.023703.939203.12410HepG2EIF4B
RRN3P3ENSG00000257122.1297.10080193.212300.620703.564102.63360HepG2EIF4G1
RRN3P3ENSG00000257122.1451.91570269.746700.744307.182706.28980HepG2ETF1
RRN3P3ENSG00000257122.1247.31860155.383100.670402.497601.76220HepG2FIP1L1
RRN3P3ENSG00000257122.1201.54230103.457600.961904.820303.92370HepG2FXR1
RRN3P3ENSG00000257122.1170.9877096.021800.832403.533402.78600HepG2G3BP1
RRN3P3ENSG00000257122.1133.98680200.08940-0.578602.033701.47960HepG2GPKOW
RRN3P3ENSG00000257122.1179.8856097.114800.889203.864503.05110HepG2HNRNPK
RRN3P3ENSG00000257122.1173.75030107.186900.696802.733101.78790HepG2HNRNPM
RRN3P3ENSG00000257122.1194.19510139.881100.473201.962701.44250HepG2HNRNPU
RRN3P3ENSG00000257122.1150.9667097.621700.628902.077401.48360HepG2IGF2BP2
RRN3P3ENSG00000257122.1178.3410091.542600.962002.481301.55660HepG2IGF2BP3
RRN3P3ENSG00000257122.1177.0814098.157700.851102.273401.37730HepG2KHSRP
RRN3P3ENSG00000257122.1307.10220191.223600.683403.290902.38310HepG2LARP4
RRN3P3ENSG00000257122.1244.01210103.493301.237308.070106.96020HepG2MAGOH
RRN3P3ENSG00000257122.1181.06240104.087900.798603.057602.39750HepG2MATR3
RRN3P3ENSG00000257122.1262.27920125.724001.060706.932805.71040HepG2MSI2
RRN3P3ENSG00000257122.1227.51660106.552201.094306.136805.21090HepG2NCBP2
RRN3P3ENSG00000257122.1228.4648094.172101.2785010.029709.11480HepG2PTBP1
RRN3P3ENSG00000257122.1321.26390196.801000.706905.445704.67150HepG2PUM1
RRN3P3ENSG00000257122.1385.45840225.453100.773606.079305.38460HepG2RBM22
RRN3P3ENSG00000257122.1139.7735092.568400.594401.881601.31610HepG2RBM25
RRN3P3ENSG00000257122.1186.39730104.808400.830503.873103.25370HepG2NELFE
RRN3P3ENSG00000257122.1167.3351097.607700.777603.344802.67480HepG2RECQL
RRN3P3ENSG00000257122.1353.31930209.859900.751404.016703.19840HepG2SF3A3
RRN3P3ENSG00000257122.1207.3486098.053701.080306.538305.69160HepG2SF3B4
RRN3P3ENSG00000257122.1337.90550254.631600.408102.073201.61980HepG2SRFBP1
RRN3P3ENSG00000257122.1192.80780102.343400.913604.716204.14060HepG2SRSF1
RRN3P3ENSG00000257122.1248.84430183.041500.443001.847401.32170HepG2SRSF5
RRN3P3ENSG00000257122.1142.6533083.258900.776703.371402.77460HepG2SRSF9
RRN3P3ENSG00000257122.1283.69890208.188800.446402.076801.52300HepG2SUCLG1
RRN3P3ENSG00000257122.191.85960137.13490-0.578102.167201.65590HepG2TRIM56
RRN3P3ENSG00000257122.1362.81460132.901401.4488012.6756011.29700HepG2U2AF1
RRN3P3ENSG00000257122.1302.98200119.099101.347003.938902.74970HepG2U2AF2
RRN3P3ENSG00000257122.1133.1546085.365700.641302.117001.45400HepG2UCHL5
RRN3P3ENSG00000257122.1297.20410179.685600.725904.963104.20080HepG2UTP3
RRN3P3ENSG00000257122.1309.79320204.689500.597804.381303.73460HepG2ZNF622
RRN3P3ENSG00000257122.1298.58930164.648600.858704.612502.94780K562APOBEC3C
RRN3P3ENSG00000257122.147.01320102.63650-1.126403.583302.59140K562BOP1
RRN3P3ENSG00000257122.148.85420109.13130-1.159504.425803.43440K562CPSF6
RRN3P3ENSG00000257122.1290.78650167.865000.792605.967305.06220K562DDX47
RRN3P3ENSG00000257122.175.63200126.24300-0.739102.378601.53370K562EFTUD2
RRN3P3ENSG00000257122.1207.28010135.204200.616302.504801.52670K562EIF3D
RRN3P3ENSG00000257122.1154.3444069.962701.141404.084703.12830K562EIF3G
RRN3P3ENSG00000257122.191.72770168.26290-0.875304.056703.01550K562FIP1L1
RRN3P3ENSG00000257122.1129.3863062.863201.041304.341003.60740K562FXR1
RRN3P3ENSG00000257122.1167.32650110.480400.598802.382601.55360K562HNRNPU
RRN3P3ENSG00000257122.1154.84420228.15060-0.559202.420901.67300K562HSPD1
RRN3P3ENSG00000257122.1125.2154080.840300.631202.198301.44360K562MAGOH
RRN3P3ENSG00000257122.170.73350124.30210-0.813402.533801.31150K562NONO
RRN3P3ENSG00000257122.160.69850119.59170-0.978403.289801.30220K562PES1
RRN3P3ENSG00000257122.1130.00030190.98930-0.555002.242401.50550K562PPIG
RRN3P3ENSG00000257122.156.40450122.84810-1.123003.869502.98380K562PRPF8
RRN3P3ENSG00000257122.1189.5593078.541901.271008.871007.72370K562PTBP1
RRN3P3ENSG00000257122.156.7795099.09230-0.803402.034001.51130K562RBM15
RRN3P3ENSG00000257122.1121.54630201.95980-0.732603.252201.87020K562STAU1
RRN3P3ENSG00000257122.159.76410125.91320-1.075103.937702.69970K562UCHL5
RRN3P3ENSG00000257122.150.45210103.10980-1.031202.735601.45540K562UTP18
RRN3P3ENSG00000257122.1201.38880112.417800.841005.103503.98430K562WDR43
RRN3P3ENSG00000257122.165.28110128.17780-0.973403.595702.15230K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RRN3P3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RRN3P3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RRN3P3 is not avaliable on ENCORE database.