RP11-242D8.1

General Information

Gene Name : RP11-242D8.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-242D8.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-242D8.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-242D8.1 RNA is bound by 4 proteins.

eCLIP assay for RP11-242D8.1 is not avaliable on ENCORE database.

4 proteins are bound to RP11-242D8.1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	41319230	41319362	-	intron-Distal,intron-Proximal	3.60547	4.44481	K562	CPSF6
chr17	41319070	41319112	-	intron-Distal	4.95611	6.89039	K562	RBM15
chr17	41316752	41316821	-	intron-Distal	3.17978	3.08145	HepG2	HLTF
chr17	41321640	41321702	-	intron-Distal	3.10144	3.12316	HepG2	PRPF4
chr17	41321702	41321764	-	intron-Distal	3.01332	3.57220	HepG2	PRPF4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-242D8.1 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-242D8.1 is not available on ENCORE database.
72 RBPs can affect the levels of RP11-242D8.1.

The Knockdown/knockout RNA-Seq assay for RP11-242D8.1 is not available on ENCORE database.

72 RBPs can affect the gene expression of RP11-242D8.1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-242D8.1	ENSG00000267002.1	122.14590	261.04880	-1.09570	6.38370	5.01850	HepG2	ABCF1
RP11-242D8.1	ENSG00000267002.1	88.64140	166.57610	-0.91010	5.01680	4.24480	HepG2	ACO1
RP11-242D8.1	ENSG00000267002.1	37.68870	90.55350	-1.26460	3.46100	2.87500	HepG2	AKAP1
RP11-242D8.1	ENSG00000267002.1	147.73330	351.39860	-1.25010	10.45690	8.56700	HepG2	AKAP8
RP11-242D8.1	ENSG00000267002.1	80.19120	167.35660	-1.06140	6.22180	5.11570	HepG2	AKAP8L
RP11-242D8.1	ENSG00000267002.1	118.11330	195.57530	-0.72760	3.35710	2.01060	HepG2	BUD13
RP11-242D8.1	ENSG00000267002.1	102.62860	155.29570	-0.59760	2.20980	1.51590	HepG2	CALR
RP11-242D8.1	ENSG00000267002.1	70.01960	113.42690	-0.69590	2.22790	1.64050	HepG2	CELF1
RP11-242D8.1	ENSG00000267002.1	90.59490	154.05790	-0.76600	3.96490	2.98830	HepG2	DDX19B
RP11-242D8.1	ENSG00000267002.1	37.30580	86.74210	-1.21730	3.46960	2.77890	HepG2	DDX3X
RP11-242D8.1	ENSG00000267002.1	186.90570	290.62990	-0.63690	3.52150	2.06190	HepG2	DDX47
RP11-242D8.1	ENSG00000267002.1	72.49040	159.36750	-1.13650	6.06010	5.13170	HepG2	DKC1
RP11-242D8.1	ENSG00000267002.1	66.37480	132.08510	-0.99280	3.52630	2.49190	HepG2	EEF2
RP11-242D8.1	ENSG00000267002.1	128.01950	71.63130	0.83760	2.74140	2.15110	HepG2	EIF2S1
RP11-242D8.1	ENSG00000267002.1	121.70160	198.01980	-0.70230	3.12830	1.87960	HepG2	EIF2S2
RP11-242D8.1	ENSG00000267002.1	51.82850	107.22030	-1.04880	3.37940	2.38560	HepG2	EIF3D
RP11-242D8.1	ENSG00000267002.1	144.27030	226.12750	-0.64840	2.88540	1.77020	HepG2	ESF1
RP11-242D8.1	ENSG00000267002.1	44.85840	162.77240	-1.85940	12.74460	11.00060	HepG2	EWSR1
RP11-242D8.1	ENSG00000267002.1	151.61360	82.97150	0.86960	3.68680	2.78770	HepG2	FUBP3
RP11-242D8.1	ENSG00000267002.1	127.02660	74.09170	0.77760	2.53300	1.89510	HepG2	G3BP1
RP11-242D8.1	ENSG00000267002.1	44.56590	95.46480	-1.09900	3.60760	2.57260	HepG2	GEMIN5
RP11-242D8.1	ENSG00000267002.1	94.07470	159.03090	-0.75740	3.73810	2.61530	HepG2	HDGF
RP11-242D8.1	ENSG00000267002.1	58.38220	102.77070	-0.81580	2.19110	1.61080	HepG2	HNRNPA1
RP11-242D8.1	ENSG00000267002.1	139.13700	83.88780	0.72990	2.80860	2.08580	HepG2	HNRNPF
RP11-242D8.1	ENSG00000267002.1	93.06050	181.86250	-0.96660	5.00450	3.76380	HepG2	HNRNPM
RP11-242D8.1	ENSG00000267002.1	67.51700	113.56570	-0.75020	2.56190	1.97820	HepG2	HNRNPU
RP11-242D8.1	ENSG00000267002.1	177.44170	382.59850	-1.10850	8.20690	6.15210	HepG2	HSPD1
RP11-242D8.1	ENSG00000267002.1	74.38430	137.21740	-0.88340	2.98450	1.60230	HepG2	ILF3
RP11-242D8.1	ENSG00000267002.1	228.33790	382.30650	-0.74360	4.02710	2.51160	HepG2	KRR1
RP11-242D8.1	ENSG00000267002.1	82.08490	213.32600	-1.37790	9.42780	8.01830	HepG2	MSI2
RP11-242D8.1	ENSG00000267002.1	190.11100	362.56410	-0.93140	5.89560	3.80990	HepG2	NKRF
RP11-242D8.1	ENSG00000267002.1	152.80210	94.49960	0.69320	2.17190	1.50670	HepG2	NSUN2
RP11-242D8.1	ENSG00000267002.1	59.75700	128.64710	-1.10620	3.78780	2.73490	HepG2	PABPC1
RP11-242D8.1	ENSG00000267002.1	203.72700	371.60170	-0.86710	5.98590	3.29840	HepG2	PPIG
RP11-242D8.1	ENSG00000267002.1	107.79520	169.66820	-0.65440	3.02530	2.38850	HepG2	PUS1
RP11-242D8.1	ENSG00000267002.1	56.93530	113.85230	-0.99980	2.61940	1.93280	HepG2	RAVER1
RP11-242D8.1	ENSG00000267002.1	201.62800	309.82170	-0.61970	3.56270	2.60130	HepG2	RBM15
RP11-242D8.1	ENSG00000267002.1	74.97530	155.77510	-1.05500	4.89730	4.25730	HepG2	RBM22
RP11-242D8.1	ENSG00000267002.1	40.71720	79.56010	-0.96640	2.34800	1.37440	HepG2	RCC2
RP11-242D8.1	ENSG00000267002.1	43.65180	104.33370	-1.25710	4.86390	4.07490	HepG2	RPS19
RP11-242D8.1	ENSG00000267002.1	54.02710	104.70930	-0.95460	3.00610	2.02420	HepG2	SERBP1
RP11-242D8.1	ENSG00000267002.1	98.70200	210.36290	-1.09170	2.62770	1.31980	HepG2	SF1
RP11-242D8.1	ENSG00000267002.1	69.17320	232.78430	-1.75070	6.45290	5.39850	HepG2	SF3A3
RP11-242D8.1	ENSG00000267002.1	62.55230	117.92610	-0.91470	3.67350	2.95010	HepG2	SMN1
RP11-242D8.1	ENSG00000267002.1	100.81190	175.94840	-0.80350	3.52310	2.97890	HepG2	SRFBP1
RP11-242D8.1	ENSG00000267002.1	274.51860	113.50840	1.27400	7.82060	6.06070	HepG2	SRSF3
RP11-242D8.1	ENSG00000267002.1	157.32560	82.42080	0.93260	4.50710	3.65180	HepG2	SRSF7
RP11-242D8.1	ENSG00000267002.1	56.17010	152.77560	-1.44350	8.63790	7.83100	HepG2	SSB
RP11-242D8.1	ENSG00000267002.1	236.58380	381.21770	-0.68830	4.37660	2.79440	HepG2	SSRP1
RP11-242D8.1	ENSG00000267002.1	72.00340	129.67100	-0.84870	2.91380	2.27920	HepG2	SUCLG1
RP11-242D8.1	ENSG00000267002.1	248.32450	385.93390	-0.63610	3.26340	1.81470	HepG2	SUGP2
RP11-242D8.1	ENSG00000267002.1	101.10110	177.98300	-0.81590	3.84720	2.75000	HepG2	SUPT6H
RP11-242D8.1	ENSG00000267002.1	180.54750	374.44160	-1.05240	4.86610	3.48130	HepG2	TBRG4
RP11-242D8.1	ENSG00000267002.1	126.86260	225.48210	-0.82970	4.07130	3.31510	HepG2	U2AF1
RP11-242D8.1	ENSG00000267002.1	52.09920	23.14700	1.17030	2.57130	1.84050	HepG2	UCHL5
RP11-242D8.1	ENSG00000267002.1	117.67160	206.44580	-0.81100	3.71260	2.92240	HepG2	UPF1
RP11-242D8.1	ENSG00000267002.1	92.63630	199.31270	-1.10540	5.62450	4.81950	HepG2	UTP3
RP11-242D8.1	ENSG00000267002.1	68.18930	126.59440	-0.89260	3.13350	1.95890	HepG2	XPO5
RP11-242D8.1	ENSG00000267002.1	59.71130	125.16630	-1.06780	2.45160	1.45540	HepG2	XRCC6
RP11-242D8.1	ENSG00000267002.1	98.40510	227.04850	-1.20620	6.35310	5.61310	HepG2	ZNF622
RP11-242D8.1	ENSG00000267002.1	113.53100	300.41650	-1.40390	8.02470	7.12840	K562	AGGF1
RP11-242D8.1	ENSG00000267002.1	196.31500	330.05320	-0.74950	2.74720	1.76970	K562	AKAP8
RP11-242D8.1	ENSG00000267002.1	114.19340	312.58250	-1.45280	8.30050	7.10840	K562	AKAP8L
RP11-242D8.1	ENSG00000267002.1	179.77060	327.94680	-0.86730	4.46780	3.27800	K562	ATP5C1
RP11-242D8.1	ENSG00000267002.1	228.02580	359.06150	-0.65500	2.50240	1.39300	K562	CCDC124
RP11-242D8.1	ENSG00000267002.1	88.59100	219.68070	-1.31020	10.65700	9.47270	K562	DDX47
RP11-242D8.1	ENSG00000267002.1	212.95200	336.45230	-0.65990	3.12690	2.18800	K562	DKC1
RP11-242D8.1	ENSG00000267002.1	25.40910	68.74470	-1.43590	3.98580	3.03880	K562	EIF3G
RP11-242D8.1	ENSG00000267002.1	49.59060	94.43790	-0.92930	2.89490	2.27830	K562	FXR1
RP11-242D8.1	ENSG00000267002.1	166.48040	331.77910	-0.99490	4.71740	3.58840	K562	KIF1C
RP11-242D8.1	ENSG00000267002.1	200.79360	317.55290	-0.66130	2.28590	1.33800	K562	MAK16
RP11-242D8.1	ENSG00000267002.1	187.24490	371.66930	-0.98910	5.23040	3.89560	K562	MBNL1
RP11-242D8.1	ENSG00000267002.1	125.67290	260.50880	-1.05170	3.58810	2.55150	K562	NAA15
RP11-242D8.1	ENSG00000267002.1	144.80290	257.09280	-0.82820	2.78690	1.79340	K562	PABPN1
RP11-242D8.1	ENSG00000267002.1	27.22680	66.71340	-1.29290	2.90140	2.13480	K562	PRPF8
RP11-242D8.1	ENSG00000267002.1	110.26770	310.10000	-1.49170	8.26430	7.37470	K562	PUS1
RP11-242D8.1	ENSG00000267002.1	134.11890	302.05960	-1.17130	4.67300	3.92270	K562	RBM15
RP11-242D8.1	ENSG00000267002.1	23.04340	67.96770	-1.56050	3.90560	2.93280	K562	RPS19
RP11-242D8.1	ENSG00000267002.1	110.59620	235.13780	-1.08820	3.64690	2.20190	K562	SF1
RP11-242D8.1	ENSG00000267002.1	200.06600	314.30390	-0.65170	2.59310	1.35570	K562	UTP18
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-242D8.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-242D8.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-242D8.1 is not avaliable on ENCORE database.

4 proteins are bound to RP11-242D8.1 RNA:

eCLIP assay for RP11-242D8.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-242D8.1 is not available on ENCORE database.

72 RBPs can affect the gene expression of RP11-242D8.1 :

The Knockdown/knockout RNA-Seq assay for RP11-242D8.1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-242D8.1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-242D8.1 is not avaliable on ENCORE database.