RELT

General Information

Gene Name       : RELT
Gene ID             : ENSG00000054967.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RELT)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RELTENSG00000054967.121.565.713.63ENCSR000AEF
HepG2RELTENSG00000054967.124.051.462.75ENCSR985KAT
K562RELTENSG00000054967.126.234.065.14ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RELT is not avaliable on ENCORE database.



Proteins bound to RNA
  • RELT RNA is bound by 22 proteins.  







eCLIP assay for RELT is not avaliable on ENCORE database.





22 proteins are bound to RELT RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr117310528673105366+3'-UTR,CDS,intron-Proximal3.186453.47879HepG2PPIG
chr117310719673107274+3'-UTR3.247143.91938K562UPF1
chr117310732973107414+3'-UTR4.722194.22051K562UPF1
chr117310690573106989+3'-UTR3.471774.26467K562UPF1
chr117309537373095427+3'-UTR,intron-Distal,intron-Proximal3.283673.80158K562NONO
chr117310654373106722+3'-UTR5.174486.16445HepG2PPIG
chr117310523473105324+3'-UTR,CDS,intron-Proximal3.972879.31583K562SF3B4
chr117309528973095398+3'-UTR,intron-Distal,intron-Proximal3.155204.50097K562FUS
chr117310755273107597+3'-UTR3.584374.14074K562UPF1
chr117308791273087962+5'-UTR,intron-Distal,intron-Proximal4.574094.23759K562NONO
chr117310223573102329+CDS,intron-Distal,intron-Proximal4.230017.80986K562PRPF8
chr117310226773102288+CDS,intron-Distal,intron-Proximal4.6368613.24177K562AQR
chr117310332873103408+CDS,intron-Distal3.740413.06853K562LIN28B
chr117310196573102010+CDS,intron-Proximal5.650679.63974K562AQR
chr117310159573101673+CDS,intron-Proximal4.174485.24452HepG2PPIG
chr117309925973099340+intron-Distal3.427116.99195K562NONO
chr117308812373088184+intron-Distal3.873403.06140HepG2NKRF
chr117308924873089320+intron-Distal3.625973.34442K562FUS
chr117308812773088176+intron-Distal3.972487.33270K562DROSHA
chr117308813273088219+intron-Distal3.508519.70675K562NONO
chr117310362873103686+intron-Distal5.030213.59041K562DROSHA
chr117308812273088200+intron-Distal3.368706.45612K562TARDBP
chr117308949873089527+intron-Distal4.099353.37414K562CSTF2T
chr117309067873090728+intron-Distal3.177376.42696K562EWSR1
chr117309719073097247+intron-Distal3.226514.40213K562EWSR1
chr117309769873097794+intron-Distal4.877487.60866K562NONO
chr117309608073096137+intron-Distal4.636144.46290K562EWSR1
chr117309233773092419+intron-Distal4.030984.52383K562FUS
chr117309067173090727+intron-Distal4.977186.64417K562NONO
chr117309956073099586+intron-Distal3.815753.02711K562EWSR1
chr117310363973103736+intron-Distal4.907796.90606K562EWSR1
chr117309441073094464+intron-Distal3.158353.20331K562CSTF2T
chr117310228873102314+intron-Distal,intron-Proximal5.6208018.59418K562AQR
chr117308808573088190+intron-Distal4.656547.82948K562FUS
chr117309323573093278+intron-Distal4.165253.96304K562CSTF2T
chr117309549973095551+intron-Distal,intron-Proximal3.169574.95625K562EWSR1
chr117309154373091596+intron-Distal3.822124.73842K562EWSR1
chr117308832773088402+intron-Distal4.3918410.30731K562CSTF2T
chr117309140973091442+intron-Distal4.661695.95343K562EWSR1
chr117309661473096647+intron-Distal4.202774.14056K562EWSR1
chr117308805573088093+intron-Distal4.531764.70436K562EWSR1
chr117308796273088021+intron-Distal,intron-Proximal3.547503.14365K562NONO
chr117309262773092659+intron-Distal5.019033.62726K562DROSHA
chr117309850573098584+intron-Distal3.665254.91684K562CSTF2T
chr117309302973093095+intron-Distal4.777437.47837K562CSTF2T
chr117309588573095944+intron-Distal4.272863.02731K562AKAP8L
chr117308832673088408+intron-Distal3.6919810.21760K562EIF4G2
chr117309624773096332+intron-Distal4.034563.69819HepG2CSTF2T
chr117309879073098846+intron-Distal3.811475.27813K562EWSR1
chr117308812773088244+intron-Distal4.4547617.33154K562CSTF2T
chr117309590873095959+intron-Distal3.422544.76898K562CSTF2T
chr117309155573091602+intron-Distal4.211804.27402K562CSTF2T
chr117308824473088287+intron-Distal4.390584.75311K562CSTF2T
chr117309475273094778+intron-Distal3.276273.64784K562EWSR1
chr117309234473092409+intron-Distal3.054654.53878K562CSTF2T
chr117309346773093530+intron-Distal3.413134.01575K562NONO
chr117309361473093657+intron-Distal3.637515.27813K562EWSR1
chr117309498273095031+intron-Distal3.538064.20405K562EWSR1
chr117308926273089319+intron-Distal4.947987.56775K562EWSR1
chr117309136873091438+intron-Distal3.132005.38993K562NONO
chr117310365073103745+intron-Distal3.390583.73797K562CSTF2T
chr117308831073088406+intron-Distal4.415345.87610K562FUS
chr117309343773093477+intron-Distal3.631823.21586K562DDX52
chr117310381073103870+intron-Distal5.020036.98761K562XRN2
chr117309954873099609+intron-Distal4.165253.96304K562CSTF2T
chr117308888673088950+intron-Distal4.2946210.04245K562CSTF2T
chr117309258473092666+intron-Distal4.093078.40406K562NONO
chr117308910773089158+intron-Distal4.159048.03499K562EWSR1
chr117309002573090081+intron-Distal3.782923.27618K562RBFOX2
chr117309191573091979+intron-Distal3.573803.01619K562FUS
chr117310317473103240+intron-Distal,intron-Proximal3.768384.41130K562AQR
chr117309191473091968+intron-Distal4.824464.38162K562DDX52
chr117308821973088255+intron-Distal4.078203.98553K562NONO
chr117308861073088662+intron-Distal3.629984.31590K562EIF4G2
chr117308824173088376+intron-Distal5.2871310.05687K562TARDBP
chr117309279873092855+intron-Distal4.594415.42636K562NONO
chr117309908673099142+intron-Distal3.406223.80158K562NONO
chr117308812473088199+intron-Distal3.382463.98034K562DDX6
chr117309590973095957+intron-Distal3.561204.51839K562EWSR1
chr117308989973089932+intron-Distal4.159043.86024K562EWSR1
chr117309258873092648+intron-Distal4.103957.20278K562EWSR1
chr117309103373091066+intron-Distal3.200273.15535K562EWSR1
chr117309438673094466+intron-Distal4.197147.19956K562EWSR1
chr117308938773089441+intron-Distal5.106229.08542K562CSTF2T
chr117308812573088239+intron-Distal3.5394510.46681K562EWSR1
chr117309624773096322+intron-Distal4.872777.92479K562CSTF2T
chr117308912473089186+intron-Distal3.618064.71513K562NONO
chr117310232973102413+intron-Distal,intron-Proximal4.004596.35873K562PRPF8
chr117308813673088203+intron-Distal5.330967.83161K562GEMIN5
chr117310231473102357+intron-Distal,intron-Proximal5.585049.63974K562AQR
chr117309629273096315+intron-Distal4.429994.42197K562EWSR1
chr117308832773088393+intron-Distal5.205617.85689K562NONO
chr117309322873093280+intron-Distal5.248708.18518K562EWSR1
chr117309748173097535+intron-Distal3.048434.40213K562EWSR1
chr117308889573088920+intron-Distal3.256003.47685K562EIF4G2
chr117308813173088207+intron-Distal3.934938.27370K562EIF4G2
chr117309345973093505+intron-Distal3.946206.90123K562EWSR1
chr117308833773088378+intron-Distal3.337753.76473K562DROSHA
chr117309651273096568+intron-Distal4.446194.71107K562CSTF2T
chr117309343673093544+intron-Distal4.387025.93472K562FUS
chr117309193173091975+intron-Distal4.700276.12846K562EWSR1
chr117309344473093538+intron-Distal5.067299.31813K562CSTF2T
chr117309717373097243+intron-Distal4.715026.92157K562CSTF2T
chr117308858673088655+intron-Distal3.720345.57638K562CSTF2T
chr117309623373096304+intron-Distal4.582395.32699K562SLTM
chr117310499373105054+intron-Proximal5.374888.34710K562AQR
chr117310520473105277+intron-Proximal4.106564.89018K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RELT is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RELT is not available on ENCORE database.

  • 72 RBPs can affect the levels of RELT.  








The Knockdown/knockout RNA-Seq assay for RELT is not available on ENCORE database.





72 RBPs can affect the gene expression of RELT :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RELTENSG00000054967.8318.61990199.783900.673305.211204.42930HepG2ACO1
RELTENSG00000054967.8248.02840119.991001.047505.247804.54420HepG2AKAP1
RELTENSG00000054967.8280.25820187.691800.578303.535902.77650HepG2AUH
RELTENSG00000054967.8134.3579073.844800.863402.951402.33590HepG2BOP1
RELTENSG00000054967.839.0381094.31700-1.272603.346102.50110HepG2CIRBP
RELTENSG00000054967.8120.25860199.73580-0.732004.164503.38100HepG2CKAP4
RELTENSG00000054967.8134.9890064.633001.062402.484601.76390HepG2CNOT7
RELTENSG00000054967.8184.63120115.041200.682402.466401.42480HepG2CPSF7
RELTENSG00000054967.8265.36910139.766100.924907.360906.40800HepG2CELF1
RELTENSG00000054967.8118.79340184.76930-0.637303.358602.44980HepG2DDX19B
RELTENSG00000054967.839.8417081.74530-1.036902.910101.97030HepG2DDX24
RELTENSG00000054967.8174.80250113.649200.621002.103201.41920HepG2DDX55
RELTENSG00000054967.874.73740122.12090-0.708402.308001.38570HepG2DDX5
RELTENSG00000054967.8453.7992098.780102.1997026.9009025.27490HepG2DDX6
RELTENSG00000054967.868.04870191.13780-1.4900010.629109.47740HepG2DKC1
RELTENSG00000054967.845.1346089.62420-0.989702.641101.73760HepG2EEF2
RELTENSG00000054967.8300.0492094.893701.6607014.3048013.02720HepG2EIF2S1
RELTENSG00000054967.841.0104078.86150-0.943302.560201.52170HepG2EIF3G
RELTENSG00000054967.863.25780104.83680-0.728801.861001.33280HepG2EIF4A3
RELTENSG00000054967.860.37450121.04700-1.003603.902602.62280HepG2ESF1
RELTENSG00000054967.851.77880104.27740-1.010002.616601.75230HepG2G3BP2
RELTENSG00000054967.840.4854092.07790-1.185503.182401.68800HepG2HLTF
RELTENSG00000054967.836.7400082.88020-1.173703.089302.41080HepG2HNRNPA1
RELTENSG00000054967.8192.2977099.516000.950204.368003.50720HepG2HNRNPK
RELTENSG00000054967.8185.01020136.860500.434801.906701.33410HepG2HNRNPL
RELTENSG00000054967.8119.73090182.62460-0.609102.957801.90880HepG2KIF1C
RELTENSG00000054967.8190.35030106.487000.837903.274302.59280HepG2MATR3
RELTENSG00000054967.8209.75430148.992600.493402.289701.59600HepG2NOL12
RELTENSG00000054967.8206.1296059.127001.801605.242303.99260HepG2PABPC1
RELTENSG00000054967.8178.17010108.429500.716403.679303.00080HepG2PCBP1
RELTENSG00000054967.8113.79340203.49210-0.838605.143404.35050HepG2PUS1
RELTENSG00000054967.8322.58660180.118100.840606.383005.67410HepG2RBM22
RELTENSG00000054967.841.3451086.11700-1.058602.896801.93280HepG2RPS10
RELTENSG00000054967.8238.57740157.395000.600002.655501.99520HepG2SF3A3
RELTENSG00000054967.8394.67400203.434500.956009.905209.11650HepG2SRFBP1
RELTENSG00000054967.8195.5976097.557101.003506.983406.17860HepG2SRSF9
RELTENSG00000054967.857.41050176.62520-1.6213011.9446011.02500HepG2SSB
RELTENSG00000054967.8221.99700159.717600.474902.331801.75140HepG2SUCLG1
RELTENSG00000054967.856.81170105.97010-0.899402.622101.33430HepG2SUGP2
RELTENSG00000054967.861.88770113.14500-0.870402.062901.46630HepG2SUPV3L1
RELTENSG00000054967.840.4360088.96620-1.137603.850103.28120HepG2TIAL1
RELTENSG00000054967.8150.7256089.790000.747203.523002.90370HepG2TRIM56
RELTENSG00000054967.8115.8922066.844400.793802.838802.06980HepG2UCHL5
RELTENSG00000054967.842.9652080.58720-0.907402.262101.64650HepG2ZC3H8
RELTENSG00000054967.8718.72870337.213801.0917020.0600018.64770K562AGGF1
RELTENSG00000054967.8500.76420370.569000.434302.918301.90140K562AKAP8
RELTENSG00000054967.8620.49350350.891600.822308.919407.67300K562AKAP8L
RELTENSG00000054967.8973.26810620.807800.648606.248005.42590K562AQR
RELTENSG00000054967.8669.94240244.751501.4526017.2483014.78760K562EFTUD2
RELTENSG00000054967.8187.89500131.244500.517602.029701.33970K562EIF3G
RELTENSG00000054967.8333.75620217.480200.617803.740502.74300K562FIP1L1
RELTENSG00000054967.824.97950113.29040-2.181208.125406.78660K562G3BP2
RELTENSG00000054967.8439.99940235.220400.903406.526704.66660K562IGF2BP2
RELTENSG00000054967.8496.16730372.364700.414002.350701.59890K562KIF1C
RELTENSG00000054967.8348.45510247.236100.495002.851201.99700K562MAGOH
RELTENSG00000054967.8495.71120356.460100.475702.730501.66280K562MAK16
RELTENSG00000054967.8728.35840417.145200.804009.960608.02930K562MBNL1
RELTENSG00000054967.8451.98840292.390200.628303.420402.41890K562NAA15
RELTENSG00000054967.8370.24530248.820500.573302.755401.34180K562NUSAP1
RELTENSG00000054967.8369.82700218.833200.756902.743001.75790K562PABPN1
RELTENSG00000054967.8516.87350219.984201.2323013.7935011.49010K562PCBP2
RELTENSG00000054967.8409.85710246.927700.730905.607704.37020K562PPIG
RELTENSG00000054967.8474.10510238.175600.993105.658604.58620K562PRPF8
RELTENSG00000054967.8368.11170226.438900.700904.256303.09980K562PSIP1
RELTENSG00000054967.8397.29680240.203200.725906.141205.18440K562PTBP1
RELTENSG00000054967.8576.42000779.92500-0.436203.073402.21460K562PUF60
RELTENSG00000054967.8633.48410829.74110-0.389403.400602.21170K562PUM1
RELTENSG00000054967.8808.87630347.949401.216906.507705.71560K562PUS1
RELTENSG00000054967.8651.99370339.056500.9432010.351909.22940K562RBM15
RELTENSG00000054967.8467.22170230.341901.0202010.888209.05590K562RBM22
RELTENSG00000054967.8433.67010200.143401.115504.941003.17840K562SF1
RELTENSG00000054967.8580.71540464.464600.322202.039401.33210K562SF3A3
RELTENSG00000054967.8363.17850117.668501.6259011.067809.29040K562SF3B4
RELTENSG00000054967.8419.31330229.829400.867403.347001.94610K562SNRNP200
RELTENSG00000054967.8320.02530235.476000.442502.166901.53280K562SRSF1
RELTENSG00000054967.853.16180111.19670-1.064702.774401.31030K562TAF15
RELTENSG00000054967.8342.65950238.324100.523802.849202.13150K562TARDBP
RELTENSG00000054967.8335.83600225.572700.574103.146901.97040K562TRA2A
RELTENSG00000054967.8348.65480231.551600.590402.834701.87570K562TRIM56
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RELT is not available on ENCORE database.





4 RBPs can affect the splicing of RELT :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERELTENSG00000054967.8chr11+7310510973105194731048577310496273105280731053620.091000.003270.03287includedK562AQR
A3SSRELTENSG00000054967.8chr11+7310485773104962731048817310496273103255731035130.053000.014970.07462longerK562AQR
RIRELTENSG00000054967.8chr11+7310528073105779731052807310536273105521731057790.266000.008400.06679includedHepG2RBM22
RIRELTENSG00000054967.8chr11+7310528073105779731052807310536273105521731057790.093000.003000.03504includedK562UTP18
RIRELTENSG00000054967.8chr11+7310528073105779731052807310536273105521731057790.187000.000680.00476includedK562AQR
RIRELTENSG00000054967.8chr11+7310552173106330731055217310577973106131731063300.195000.000080.00064includedK562AQR
MXERELTENSG00000054967.8chr11+73102188731022687310325573103513731017997310196673104881731049620.235000.002500.041311includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RELT is not avaliable on ENCORE database.