POC1B

General Information

Gene Name       : POC1B
Gene ID             : ENSG00000139323.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: POC1B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878POC1BENSG00000139323.1310.508.609.55ENCSR000AEF
HepG2POC1BENSG00000139323.136.198.917.55ENCSR985KAT
K562POC1BENSG00000139323.138.5110.329.41ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for POC1B is not avaliable on ENCORE database.



Proteins bound to RNA
  • POC1B RNA is bound by 3 proteins.  







eCLIP assay for POC1B is not avaliable on ENCORE database.





3 proteins are bound to POC1B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr128981451589814646-3'-UTR,intron-Distal,intron-Proximal5.079799.15742K562IGF2BP1
chr128991720189917285-3'-UTR,CDS,intron-Distal4.728455.84094HepG2SND1
chr128984297589843126-intron-Distal3.335553.02891HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for POC1B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for POC1B is not available on ENCORE database.

  • 95 RBPs can affect the levels of POC1B.  








The Knockdown/knockout RNA-Seq assay for POC1B is not available on ENCORE database.





95 RBPs can affect the gene expression of POC1B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
POC1BENSG00000139323.9318.93910519.89730-0.704904.108802.97550HepG2ABCF1
POC1BENSG00000139323.9237.58150350.91780-0.562703.153002.09240HepG2ADAR
POC1BENSG00000139323.9222.15020320.49200-0.528803.442902.59810HepG2AKAP8L
POC1BENSG00000139323.9248.56990351.61580-0.500302.390801.65660HepG2ASCC1
POC1BENSG00000139323.9220.68720317.05290-0.522702.138301.31780HepG2BCCIP
POC1BENSG00000139323.9131.61160275.49180-1.065706.797805.45880HepG2BCLAF1
POC1BENSG00000139323.9306.82230448.18750-0.546703.444102.78460HepG2BOP1
POC1BENSG00000139323.9384.02990536.76430-0.483103.431302.58440HepG2CALR
POC1BENSG00000139323.9225.03010334.05710-0.570002.817602.03720HepG2CIRBP
POC1BENSG00000139323.9227.98770318.92700-0.484303.176502.47390HepG2CKAP4
POC1BENSG00000139323.9124.37850195.83800-0.654902.711301.64460HepG2CSTF2
POC1BENSG00000139323.9372.68270498.09020-0.418502.981702.31820HepG2CELF1
POC1BENSG00000139323.9430.12650535.54380-0.316202.323401.63630HepG2DAZAP1
POC1BENSG00000139323.9151.59830407.08250-1.4251013.9909012.69150HepG2DDX3X
POC1BENSG00000139323.9295.49960463.18560-0.648404.649903.35530HepG2DDX5
POC1BENSG00000139323.9213.14460340.80470-0.677104.435803.20650HepG2DHX30
POC1BENSG00000139323.9218.33650305.18080-0.483102.670102.00370HepG2DKC1
POC1BENSG00000139323.9252.68260353.33830-0.483703.037002.30550HepG2DNAJC21
POC1BENSG00000139323.9228.71540350.26160-0.614905.127704.28380HepG2DNAJC2
POC1BENSG00000139323.9183.08640341.39810-0.898905.874804.57240HepG2EEF2
POC1BENSG00000139323.9107.33310336.16870-1.6471015.0742013.76150HepG2EIF2S1
POC1BENSG00000139323.9130.53790371.52150-1.5090014.1652012.74260HepG2EIF4A3
POC1BENSG00000139323.9134.21430361.69860-1.4302010.476909.18400HepG2EIF4B
POC1BENSG00000139323.9375.30610506.13960-0.431502.456901.68730HepG2EIF4G2
POC1BENSG00000139323.9454.04440642.03630-0.499804.759704.00990HepG2ETF1
POC1BENSG00000139323.9225.19560311.71480-0.469002.419801.64010HepG2EWSR1
POC1BENSG00000139323.9142.59110246.75270-0.791203.960102.87430HepG2GEMIN5
POC1BENSG00000139323.9295.39300466.43230-0.659004.064203.30060HepG2GPKOW
POC1BENSG00000139323.9202.65570304.54400-0.587604.131702.95260HepG2HDGF
POC1BENSG00000139323.9146.89930356.72380-1.2800011.7816010.59730HepG2HNRNPA1
POC1BENSG00000139323.9223.30630396.80370-0.829406.079605.08050HepG2HNRNPC
POC1BENSG00000139323.9277.06600366.54320-0.403802.312401.65250HepG2HNRNPF
POC1BENSG00000139323.9265.56240445.12430-0.745205.148904.31780HepG2HNRNPLL
POC1BENSG00000139323.9259.25960362.36110-0.483002.396001.50920HepG2HNRNPM
POC1BENSG00000139323.9310.13820394.17920-0.345901.827101.32490HepG2HNRNPU
POC1BENSG00000139323.9213.26810360.94270-0.759105.430904.45050HepG2IGF2BP1
POC1BENSG00000139323.9129.84260353.44750-1.4447013.3984012.03840HepG2IGF2BP2
POC1BENSG00000139323.9262.46470716.50090-1.448806.987205.65740HepG2LARP4
POC1BENSG00000139323.9201.27520374.93310-0.897506.274405.29570HepG2MAGOH
POC1BENSG00000139323.993.46760385.92690-2.0458023.2301021.51170HepG2NCBP2
POC1BENSG00000139323.9231.44980343.72170-0.570502.966102.22100HepG2PABPC4
POC1BENSG00000139323.9242.99430346.25800-0.510903.431902.77220HepG2PCBP1
POC1BENSG00000139323.9187.40580339.11240-0.855604.819003.47630HepG2PCBP2
POC1BENSG00000139323.9179.55680506.93650-1.4974020.4303019.01080HepG2PUF60
POC1BENSG00000139323.9388.21880538.14370-0.471104.536903.81750HepG2PUM1
POC1BENSG00000139323.9248.16130537.74550-1.1156014.1431012.70260HepG2PUM2
POC1BENSG00000139323.9245.32440324.90310-0.405302.399301.81480HepG2PUS1
POC1BENSG00000139323.9181.19120304.01780-0.746603.407902.22940HepG2RCC2
POC1BENSG00000139323.9304.86030392.10810-0.363101.999901.52380HepG2NELFE
POC1BENSG00000139323.9222.13520394.82350-0.829806.504205.52050HepG2RPLP0
POC1BENSG00000139323.9169.03620321.47980-0.927405.132603.86970HepG2RPS10
POC1BENSG00000139323.9192.97130269.66970-0.482802.183501.63040HepG2RPS19
POC1BENSG00000139323.9214.89670345.29040-0.684203.943502.99600HepG2RPS2
POC1BENSG00000139323.9203.78890363.82730-0.836204.974203.90140HepG2RPS3A
POC1BENSG00000139323.9250.13430351.02550-0.488903.295202.60260HepG2SAFB2
POC1BENSG00000139323.9262.71790367.21430-0.483101.997601.42290HepG2SF3A3
POC1BENSG00000139323.9202.46550440.58910-1.1218010.865309.55320HepG2SF3B1
POC1BENSG00000139323.9268.65290366.82660-0.449402.718602.13170HepG2SF3B4
POC1BENSG00000139323.9331.73700486.09000-0.551205.055704.15230HepG2SLBP
POC1BENSG00000139323.9286.36840500.53580-0.805609.090108.04360HepG2SRSF5
POC1BENSG00000139323.9240.07500360.10890-0.584904.144903.31920HepG2SRSF7
POC1BENSG00000139323.9291.99090526.20030-0.8497011.0663010.17400HepG2SSB
POC1BENSG00000139323.9367.57260569.23860-0.631007.177506.25590HepG2SUCLG1
POC1BENSG00000139323.9190.96820354.68300-0.893204.273903.11700HepG2SUPT6H
POC1BENSG00000139323.9209.40380310.32070-0.567502.343201.71440HepG2SUPV3L1
POC1BENSG00000139323.9495.54130344.136100.525904.030403.37380HepG2TAF15
POC1BENSG00000139323.9277.93180433.84010-0.642404.298403.42110HepG2TARDBP
POC1BENSG00000139323.9163.21270329.93230-1.015404.219502.92070HepG2TBRG4
POC1BENSG00000139323.9176.93010382.96460-1.1140010.694209.82180HepG2TIAL1
POC1BENSG00000139323.9259.83620386.44620-0.572704.722704.02560HepG2TRIM56
POC1BENSG00000139323.9338.51500495.26890-0.549003.889602.83200HepG2TUFM
POC1BENSG00000139323.9125.81330183.31480-0.543002.013001.36530HepG2UCHL5
POC1BENSG00000139323.9192.23700325.66240-0.760506.258805.27720HepG2UPF1
POC1BENSG00000139323.9189.54680284.15420-0.584102.191901.30450HepG2UPF2
POC1BENSG00000139323.9214.00790325.87990-0.606702.838401.72390HepG2XPO5
POC1BENSG00000139323.9159.52080305.47680-0.937305.674204.64880HepG2XRN2
POC1BENSG00000139323.9278.26810358.16710-0.364202.243701.73640HepG2ZNF622
POC1BENSG00000139323.9466.83090751.43520-0.686706.450405.61570K562AQR
POC1BENSG00000139323.9363.03110509.99920-0.490403.639902.42380K562DDX3X
POC1BENSG00000139323.9441.33790560.13480-0.343902.594501.43380K562EIF2S1
POC1BENSG00000139323.9325.42490419.39290-0.366002.257301.53310K562EIF3G
POC1BENSG00000139323.9368.76920532.80260-0.530904.016403.02900K562EIF4A3
POC1BENSG00000139323.9285.58530479.79800-0.748507.298505.29050K562EIF4B
POC1BENSG00000139323.9294.67650554.08880-0.9110011.7859010.62610K562FXR1
POC1BENSG00000139323.9899.09980599.069600.585703.964803.08070K562G3BP2
POC1BENSG00000139323.9424.33290564.64070-0.412102.287001.56510K562GPKOW
POC1BENSG00000139323.9421.08330541.39600-0.362602.302201.32860K562HNRNPA1
POC1BENSG00000139323.9247.55970492.23610-0.9916010.140309.05490K562HNRNPC
POC1BENSG00000139323.9628.54530794.53120-0.338102.350301.38430K562HNRNPL
POC1BENSG00000139323.9367.45560496.03290-0.432902.204601.37750K562HNRNPM
POC1BENSG00000139323.9484.11440638.95200-0.400402.910801.96220K562MATR3
POC1BENSG00000139323.91442.069901147.433200.329602.783001.87070K562MBNL1
POC1BENSG00000139323.9434.52610588.86860-0.438503.864402.92300K562MTPAP
POC1BENSG00000139323.91087.83830804.269900.435602.321101.52990K562NAA15
POC1BENSG00000139323.9332.49390532.06360-0.678306.353204.51900K562NCBP2
POC1BENSG00000139323.9526.84740684.60230-0.377902.367601.61010K562PPIG
POC1BENSG00000139323.9379.72250622.00440-0.712007.783606.70830K562PTBP1
POC1BENSG00000139323.9748.173301009.11930-0.431703.765502.81800K562PUF60
POC1BENSG00000139323.91319.20280957.129300.462804.034603.39760K562PUS1
POC1BENSG00000139323.91206.60630932.623200.371503.957403.26370K562RBM15
POC1BENSG00000139323.9431.96560596.52460-0.465703.318202.39210K562RBM22
POC1BENSG00000139323.9277.99370402.73970-0.534803.399802.30220K562RCC2
POC1BENSG00000139323.9476.49970627.72410-0.397702.473001.44860K562NELFE
POC1BENSG00000139323.9468.59710667.52530-0.510503.132302.05890K562RPS3
POC1BENSG00000139323.9241.11470373.03690-0.629604.050002.72980K562SAFB
POC1BENSG00000139323.9450.70930623.05540-0.467203.967802.93750K562SF3B4
POC1BENSG00000139323.9389.65860609.75190-0.646006.045205.00900K562SRSF1
POC1BENSG00000139323.9491.28000644.44080-0.391502.534301.53470K562SRSF4
POC1BENSG00000139323.9596.46650432.599300.463303.589102.09870K562SSB
POC1BENSG00000139323.9479.27210617.15150-0.364802.106101.48270K562TARDBP
POC1BENSG00000139323.91219.63640890.463000.453704.563302.89690K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for POC1B is not available on ENCORE database.





13 RBPs can affect the splicing of POC1B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPOC1BENSG00000139323.9chr12-898909478989111989885712898858928991889689918981-0.541000.000000.00018excludedK562SRSF1
SEPOC1BENSG00000139323.9chr12-898613938986146289860544898606998986413789864271-0.161000.000010.00023excludedHepG2U2AF2
SEPOC1BENSG00000139323.9chr12-898641378986427189861393898614628988571289885892-0.091000.005100.06306excludedK562PUS1
SEPOC1BENSG00000139323.9chr12-898534148985349589818937898191568986054689860699-0.185000.004450.05692excludedK562PUS1
SEPOC1BENSG00000139323.9chr12-898534148985349589818937898191568986054689860699-0.715000.000710.04589excludedHepG2FTO
SEPOC1BENSG00000139323.9chr12-8985341489853495898189378981915689860546898606990.374000.000610.02944includedHepG2MATR3
SEPOC1BENSG00000139323.9chr12-8989081589891119898858518988589289918896899189810.622000.000770.05242includedK562HNRNPL
SEPOC1BENSG00000139323.9chr12-898909478989111989885712898858928991889689918981-0.350000.005020.08850excludedHepG2SRSF1
SEPOC1BENSG00000139323.9chr12-898613938986146289860546898606998988571289885892-0.246000.004210.09258excludedHepG2SF3A3
SEPOC1BENSG00000139323.9chr12-8986139389861462898605448986069989864137898642710.066000.000500.07881includedK562FXR2
SEPOC1BENSG00000139323.9chr12-898909478989111989885712898858928991889689918981-0.639000.000160.03231excludedK562SRSF7
SEPOC1BENSG00000139323.9chr12-898908158989111989885851898858928991889689918981-0.254000.005320.07627excludedK562U2AF2
SEPOC1BENSG00000139323.9chr12-8989094789891119898857128988589289918896899193400.293000.002950.08545includedK562HNRNPU
SEPOC1BENSG00000139323.9chr12-898534148985349589818937898191568986054689860699-0.497000.000000.00000excludedK562HNRNPU
SEPOC1BENSG00000139323.9chr12-898909478989111989885712898858928991889689918981-0.367000.002730.09509excludedK562HNRNPK
MXEPOC1BENSG00000139323.9chr12-89865944898660528988571289885892898653908986550689918896899193920.290000.010950.097931includedK562U2AF2
MXEPOC1BENSG00000139323.9chr12-89885712898858928989094789891119898659448986605289918896899189810.260000.002110.057101includedK562EFTUD2
MXEPOC1BENSG00000139323.9chr12-8986139389861462898641378986427189860546898606998986539089865506-0.170000.000540.030322includedK562SAFB

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for POC1B is not avaliable on ENCORE database.