OBSCN

General Information

Gene Name       : OBSCN
Gene ID             : ENSG00000154358.20
Essential Gene : No

Functions

Localization

Domains (AlphaFold: OBSCN)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878OBSCNENSG00000154358.200.000.020.01ENCSR000AEF
HepG2OBSCNENSG00000154358.200.110.020.07ENCSR985KAT
K562OBSCNENSG00000154358.204.972.443.71ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for OBSCN is not avaliable on ENCORE database.



Proteins bound to RNA
  • OBSCN RNA is bound by 18 proteins.  







eCLIP assay for OBSCN is not avaliable on ENCORE database.





18 proteins are bound to OBSCN RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1228401148228401305+5'-UTR,CDS3.154904.00731K562UCHL5
chr1228432026228432172+5'-UTR,CDS3.089063.41227K562UCHL5
chr1228402595228402697+5'-UTR,CDS4.073353.73926K562RBM15
chr1228431079228431161+5'-UTR,CDS,intron-Proximal4.252113.11168K562ZNF622
chr1228403507228403616+5'-UTR,CDS,intron-Proximal5.162636.83960K562AQR
chr1228412128228412179+5'-UTR,CDS,intron-Proximal5.761918.93732K562SF3B4
chr1228401088228401157+5'-UTR,CDS,intron-Proximal5.1082012.64051K562SF3B4
chr1228564574228564584+CDS,intron-Proximal4.768383.62536K562AQR
chr1228558888228558975+CDS4.917835.85529K562RBM15
chr1228426067228426118+intron-Distal3.916816.87274K562HNRNPL
chr1228400890228400958+intron-Distal3.5630311.23416K562PCBP1
chr1228403584228403649+intron-Distal,intron-Proximal3.369254.38394K562DROSHA
chr1228427629228427696+intron-Distal6.3409213.38324K562AGGF1
chr1228531768228531816+intron-Distal4.623664.74405K562AGGF1
chr1228426174228426227+intron-Distal4.826757.67538K562HNRNPL
chr1228426928228426960+intron-Distal7.0275824.53766K562AGGF1
chr1228426691228426789+intron-Distal4.363738.96915K562AKAP8L
chr1228400958228401075+intron-Distal,intron-Proximal4.6393017.67309K562PCBP1
chr1228426774228426844+intron-Distal8.4688164.49500K562AGGF1
chr1228426847228426975+intron-Distal4.065166.91978K562GTF2F1
chr1228400922228401072+intron-Distal,intron-Proximal3.370267.97840K562ILF3
chr1228426595228426668+intron-Distal7.4722574.07855K562AGGF1
chr1228405593228405745+intron-Distal5.1877712.19157K562QKI
chr1228426201228426268+intron-Distal4.150305.29754K562AKAP8L
chr1228531826228531896+intron-Distal4.488809.66169K562AGGF1
chr1228426184228426310+intron-Distal6.95936114.44750K562AGGF1
chr1228404462228404555+intron-Distal,intron-Proximal3.406333.99385K562CSTF2T
chr1228426227228426307+intron-Distal5.5578612.76916K562HNRNPL
chr1228426813228426971+intron-Distal4.605436.69007K562YBX3
chr1228426136228426173+intron-Distal3.031633.40713K562HNRNPL
chr1228400938228401121+intron-Distal,intron-Proximal3.9075410.33850K562HNRNPK
chr1228558275228558342+intron-Distal,intron-Proximal3.915933.18234K562BUD13
chr1228426692228426747+intron-Distal8.0554550.35512K562AGGF1
chr1228402898228402962+intron-Distal,intron-Proximal3.554055.29044K562CSTF2T
chr1228403600228403701+intron-Distal,intron-Proximal3.983967.39596K562CSTF2T
chr1228532210228532322+intron-Distal5.289956.53047K562AGGF1
chr1228426789228426934+intron-Distal4.1964315.04358K562AKAP8L
chr1228427510228427581+intron-Distal4.441785.60352K562HNRNPL
chr1228435530228435562+intron-Distal4.038703.42885K562AGGF1
chr1228425787228425827+intron-Distal3.828673.19036K562HNRNPL
chr1228426844228426926+intron-Distal8.9336185.74023K562AGGF1
chr1228466152228466222+intron-Distal4.073683.02181K562PRPF8
chr1228426329228426431+intron-Distal4.030157.43919K562AKAP8L
chr1228426773228426956+intron-Distal6.7347332.99955K562HNRNPL
chr1228427626228427676+intron-Distal3.278154.23794K562HNRNPL
chr1228427587228427678+intron-Distal4.322633.19482K562AKAP8L
chr1228565413228565427+intron-Proximal5.145825.17615K562AQR
chr1228565432228565456+intron-Proximal5.234825.69951K562AQR
chr1228564584228564639+intron-Proximal4.942343.62536K562AQR
chr1228412107228412128+intron-Proximal5.391136.90654K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for OBSCN is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for OBSCN is not available on ENCORE database.

  • 70 RBPs can affect the levels of OBSCN.  








The Knockdown/knockout RNA-Seq assay for OBSCN is not available on ENCORE database.





70 RBPs can affect the gene expression of OBSCN :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
OBSCNENSG00000154358.1557.893107.703302.909707.303605.74090HepG2BCCIP
OBSCNENSG00000154358.1524.093606.699301.846502.360701.53250HepG2BCLAF1
OBSCNENSG00000154358.1543.9328014.149901.634403.539702.80290HepG2CKAP4
OBSCNENSG00000154358.1536.6609014.817001.306901.874601.35610HepG2DDX6
OBSCNENSG00000154358.1519.716704.206702.228502.519601.84480HepG2DNAJC21
OBSCNENSG00000154358.1541.3862014.234101.539702.679802.09640HepG2EIF2S1
OBSCNENSG00000154358.1548.8238014.724201.729302.310601.70000HepG2G3BP1
OBSCNENSG00000154358.15181.443009.656704.2317031.4151029.53750HepG2GPKOW
OBSCNENSG00000154358.1524.783906.471601.937102.412801.37240HepG2GRSF1
OBSCNENSG00000154358.1533.313604.247002.971504.842604.02040HepG2HNRNPA1
OBSCNENSG00000154358.1528.627209.215401.635202.111801.55410HepG2HNRNPLL
OBSCNENSG00000154358.1523.342004.692502.314403.079702.44270HepG2HNRNPU
OBSCNENSG00000154358.1533.0394012.938601.352402.227701.31070HepG2KIF1C
OBSCNENSG00000154358.1558.593407.343402.996107.981106.00770HepG2LIN28B
OBSCNENSG00000154358.15128.8356015.973003.0117015.2536013.86440HepG2MATR3
OBSCNENSG00000154358.1548.141006.937102.794806.071404.41190HepG2NONO
OBSCNENSG00000154358.15110.4344014.549602.9240014.1764012.57670HepG2PABPC4
OBSCNENSG00000154358.1522.927704.185402.453603.366802.56010HepG2PPIL4
OBSCNENSG00000154358.1545.380105.856502.953906.630105.44080HepG2PRPF8
OBSCNENSG00000154358.15527.663908.594905.9399046.3953044.34460HepG2PUF60
OBSCNENSG00000154358.15102.471009.117703.490305.334104.41690HepG2PUM2
OBSCNENSG00000154358.1544.2510016.760601.400502.786402.26700HepG2RBM22
OBSCNENSG00000154358.1536.6135016.440001.155101.930101.48200HepG2SSB
OBSCNENSG00000154358.1531.415807.340902.097403.005801.62210HepG2SUGP2
OBSCNENSG00000154358.1549.912007.130202.807305.845704.35160HepG2TBRG4
OBSCNENSG00000154358.1524.415904.560802.420403.243802.70890HepG2TIAL1
OBSCNENSG00000154358.1588.9448016.355602.4430011.4532010.20930HepG2UPF1
OBSCNENSG00000154358.15121.2087017.987402.7523017.9468016.85580HepG2ZNF622
OBSCNENSG00000154358.151573.760401166.607500.431803.878903.10360K562AKAP8L
OBSCNENSG00000154358.15998.084401348.06390-0.433703.364802.73050K562AQR
OBSCNENSG00000154358.151442.606401224.084000.236902.254701.43790K562ATP5C1
OBSCNENSG00000154358.151059.68680562.946000.9125014.9167012.65550K562BCLAF1
OBSCNENSG00000154358.15962.46040647.353800.572102.591301.57950K562CCAR1
OBSCNENSG00000154358.151654.770001151.646000.522802.897301.41970K562CKAP4
OBSCNENSG00000154358.15939.37350604.102400.636805.164104.09950K562CPSF6
OBSCNENSG00000154358.15958.31020427.078401.1659023.4734020.22260K562CSTF2
OBSCNENSG00000154358.151967.655401231.510700.6759015.2559012.46360K562DDX21
OBSCNENSG00000154358.151168.97690724.781600.689503.539402.00760K562DHX30
OBSCNENSG00000154358.15397.46580658.44260-0.728203.381602.26100K562EIF3A
OBSCNENSG00000154358.15551.31000894.30760-0.697904.522003.47290K562EIF4A3
OBSCNENSG00000154358.151435.83190818.182300.8113014.0104011.26610K562EXOSC5
OBSCNENSG00000154358.15438.15620930.03110-1.0858010.541709.44660K562FXR1
OBSCNENSG00000154358.1541.51440182.08800-2.1330014.2354012.35640K562G3BP2
OBSCNENSG00000154358.15846.17140576.714200.553004.351403.36200K562GPKOW
OBSCNENSG00000154358.151037.984601296.82440-0.321202.552301.82400K562GRSF1
OBSCNENSG00000154358.151518.27870649.219301.2256013.7297012.48430K562HNRNPC
OBSCNENSG00000154358.15330.14890631.04380-0.934608.605506.80170K562HNRNPM
OBSCNENSG00000154358.151768.088901147.134900.6241011.441709.65330K562HNRNPU
OBSCNENSG00000154358.15577.455501040.00270-0.848808.814907.41090K562HSPD1
OBSCNENSG00000154358.15689.89560346.660500.992805.588803.91620K562IGF2BP2
OBSCNENSG00000154358.15922.99930653.489600.498103.879602.12020K562KHDRBS1
OBSCNENSG00000154358.15566.07940363.349300.639506.014904.58100K562MATR3
OBSCNENSG00000154358.15727.30730562.960600.369402.081401.32090K562METAP2
OBSCNENSG00000154358.151174.965701529.95770-0.380905.447204.33570K562MTPAP
OBSCNENSG00000154358.152450.803701699.939200.5277016.3493014.74270K562NSUN2
OBSCNENSG00000154358.15565.78700798.23010-0.496502.746601.94820K562POLR2G
OBSCNENSG00000154358.151440.420501926.69630-0.419602.326301.57760K562PUF60
OBSCNENSG00000154358.151353.392502050.05090-0.599104.519703.12900K562PUM1
OBSCNENSG00000154358.15749.598601156.83390-0.626006.005105.24240K562PUS1
OBSCNENSG00000154358.15544.22700339.120000.682306.006304.70750K562RBM22
OBSCNENSG00000154358.151259.059901677.37830-0.413905.750004.60670K562SF3A3
OBSCNENSG00000154358.15145.15480261.46950-0.849104.066602.03810K562SND1
OBSCNENSG00000154358.15632.658001128.58200-0.835002.942101.66260K562SNRNP200
OBSCNENSG00000154358.15958.62740466.582501.038703.732901.80060K562SRP68
OBSCNENSG00000154358.15882.89090520.652100.761808.956006.92100K562SRSF4
OBSCNENSG00000154358.15608.43960327.627400.893006.409404.69970K562SRSF5
OBSCNENSG00000154358.151375.151201098.910700.323403.737602.36850K562SRSF7
OBSCNENSG00000154358.15665.666901006.45580-0.596405.544703.57490K562SSRP1
OBSCNENSG00000154358.152261.208901681.011300.427702.979101.41410K562SUCLG1
OBSCNENSG00000154358.15357.64990800.69840-1.1627019.8248017.72130K562SYNCRIP
OBSCNENSG00000154358.15868.53240350.980701.307108.853407.49470K562TARDBP
OBSCNENSG00000154358.15747.55530338.573601.1426018.4101016.14630K562TIA1
OBSCNENSG00000154358.15951.46590559.904300.764905.343204.00340K562TIAL1
OBSCNENSG00000154358.15591.05330332.360000.830408.415206.21730K562TRA2A
OBSCNENSG00000154358.151310.71640897.085400.546905.254403.21090K562TRIP6
OBSCNENSG00000154358.152282.692901914.838500.253403.369701.95830K562TROVE2
OBSCNENSG00000154358.151501.762301802.48010-0.263303.162802.39740K562UPF1
OBSCNENSG00000154358.15986.00450487.238401.016902.484001.35800K562XRN2
OBSCNENSG00000154358.15682.783401328.57760-0.960403.724001.77080K562YTHDC2
OBSCNENSG00000154358.152188.976301518.423900.527604.238503.13140K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for OBSCN is not available on ENCORE database.






No RBPs affect the alternative splcing events of OBSCN on ENCORE database.





The Knockdown/knockout RNA-Seq assay for OBSCN is not avaliable on ENCORE database.