KIF13B

General Information

Gene Name       : KIF13B
Gene ID             : ENSG00000197892.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: KIF13B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KIF13BENSG00000197892.123.583.613.59ENCSR000AEF
HepG2KIF13BENSG00000197892.126.976.906.94ENCSR985KAT
K562KIF13BENSG00000197892.122.822.452.63ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KIF13B is not avaliable on ENCORE database.



Proteins bound to RNA
  • KIF13B RNA is bound by 16 proteins.  







eCLIP assay for KIF13B is not avaliable on ENCORE database.





16 proteins are bound to KIF13B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr82892717628927247-3'-UTR,intron-Distal5.164308.57616HepG2UPF1
chr82892501828925143-3'-UTR,intron-Distal4.736946.92572HepG2AKAP1
chr82903498629035054-3'-UTR,CDS,intron-Distal3.549087.01246HepG2BCLAF1
chr82902318229023275-3'-UTR,CDS,intron-Distal3.359804.24070HepG2GRWD1
chr82901827929018362-3'-UTR,CDS,intron-Distal5.215077.49561HepG2BCLAF1
chr82892622828926258-3'-UTR,intron-Distal3.947473.35877HepG2UPF1
chr82892608728926203-3'-UTR,intron-Distal5.6799010.71966HepG2GRSF1
chr82892677128926851-3'-UTR,intron-Distal4.680595.93974HepG2UPF1
chr82892742228927516-3'-UTR,intron-Distal3.849217.13548K562UPF1
chr82900497529005030-3'-UTR,CDS,intron-Distal4.922595.37137HepG2BCLAF1
chr82892682928926945-3'-UTR,intron-Distal5.126526.65399HepG2AKAP1
chr82902318929023290-3'-UTR,CDS,intron-Distal,intron-Proximal4.264314.16170K562UCHL5
chr82892676328926801-3'-UTR,intron-Distal4.510184.90799K562UPF1
chr82900609629006141-3'-UTR,CDS,intron-Distal3.215664.26492HepG2BCLAF1
chr82892497228925119-3'-UTR,intron-Distal5.252897.70404K562UPF1
chr82892777028927825-3'-UTR,intron-Distal4.785346.23064HepG2UPF1
chr82892741128927574-3'-UTR,intron-Distal6.2567421.87194HepG2UPF1
chr82904852129048574-3'-UTR,CDS,intron-Distal3.729434.96634HepG2PPIG
chr82892600028926087-3'-UTR,intron-Distal3.945826.89045HepG2GRSF1
chr82892687028926920-3'-UTR,intron-Distal4.016166.14808K562UPF1
chr82892667328926708-3'-UTR,intron-Distal4.460414.22051K562UPF1
chr82900490829004959-3'-UTR,CDS,intron-Distal,intron-Proximal3.969123.60441HepG2GRWD1
chr82892516428925233-3'-UTR,intron-Distal4.739895.24231K562UPF1
chr82902318829023288-3'-UTR,CDS,intron-Distal3.584686.81103HepG2PPIG
chr82902317729023252-3'-UTR,CDS,intron-Distal,intron-Proximal4.261625.79432HepG2BCLAF1
chr82892712228927171-3'-UTR,intron-Distal4.724435.94928K562UPF1
chr82900616329006192-3'-UTR,CDS,intron-Distal4.136093.06595HepG2BCLAF1
chr82904605829046116-3'-UTR,CDS,intron-Distal4.111846.65960HepG2BCLAF1
chr82900491529004954-3'-UTR,CDS,intron-Distal4.461593.89826HepG2BCLAF1
chr82892685128926955-3'-UTR,intron-Distal4.0567413.95092HepG2UPF1
chr82892747928927544-3'-UTR,intron-Distal4.035087.72256HepG2AKAP1
chr82892741828927479-3'-UTR,intron-Distal4.656616.11802HepG2AKAP1
chr82895661728956720-5'-UTR,CDS,intron-Distal,intron-Proximal5.252464.02817HepG2PRPF8
chr82912049329120559-5'-UTR,CDS,intron-Distal3.232863.41665HepG2GRWD1
chr82912049529120609-5'-UTR,CDS,intron-Distal,intron-Proximal3.596494.52274HepG2NCBP2
chr82910286029102904-5'-UTR,CDS,intron-Distal,intron-Proximal3.402276.20035HepG2BCLAF1
chr82899967428999762-CDS,intron-Distal3.631104.49016HepG2FXR2
chr82899799328998106-CDS,intron-Distal3.366873.79741HepG2GRWD1
chr82899967428999739-CDS,intron-Distal3.928553.12746HepG2GRWD1
chr82898160028981652-CDS,intron-Distal,intron-Proximal3.329883.05068HepG2U2AF2
chr82899762428997672-CDS,intron-Distal3.788664.51739HepG2BCLAF1
chr82897642028976491-CDS,intron-Distal3.303564.25541HepG2GRWD1
chr82898805128988109-CDS,intron-Distal3.347413.64266HepG2PPIG
chr82898088128980992-CDS,intron-Distal,intron-Proximal3.163364.75490HepG2GRWD1
chr82897638028976472-CDS,intron-Distal,intron-Proximal3.190657.38586HepG2PPIG
chr82898459728984659-CDS,intron-Distal,intron-Proximal3.332205.06115HepG2PRPF8
chr82898155428981626-CDS,intron-Distal3.291076.20035HepG2BCLAF1
chr82899807728998127-CDS,intron-Distal4.872826.37937HepG2BCLAF1
chr82899760228997669-CDS,intron-Distal3.221195.74131HepG2PPIG
chr82899767228997708-CDS,intron-Distal3.916555.35703HepG2BCLAF1
chr82897448028974524-CDS,intron-Distal3.922563.60441HepG2GRWD1
chr82899967028999762-CDS,intron-Distal,intron-Proximal4.8041810.19430HepG2BCLAF1
chr82899804828998127-CDS,intron-Distal4.040583.36385K562UCHL5
chr82892900828929146-CDS,intron-Distal,intron-Proximal3.031283.13980HepG2PRPF8
chr82896756128967591-CDS,intron-Distal,intron-Proximal3.217413.34848HepG2PPIG
chr82897638328976419-CDS,intron-Distal,intron-Proximal4.076284.04622HepG2GRWD1
chr82895161228951674-intron-Distal3.185053.69184HepG2SUGP2
chr82893054728930627-intron-Distal5.6566010.66887HepG2PCBP2
chr82893054428930664-intron-Distal4.596976.35155HepG2HNRNPK
chr82893052828930619-intron-Distal5.0815110.06682HepG2DDX59
chr82895162628951696-intron-Distal3.963333.71567HepG2RBFOX2
chr82901182129011938-intron-Distal3.667966.95413HepG2PCBP2
chr82910955129109603-intron-Distal4.305633.79000HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KIF13B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KIF13B is not available on ENCORE database.

  • 65 RBPs can affect the levels of KIF13B.  








The Knockdown/knockout RNA-Seq assay for KIF13B is not available on ENCORE database.





65 RBPs can affect the gene expression of KIF13B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KIF13BENSG00000197892.8958.374301128.45000-0.235702.254301.69470HepG2ACO1
KIF13BENSG00000197892.8928.931001534.34290-0.724007.026306.22140HepG2AKAP1
KIF13BENSG00000197892.8704.652601269.47600-0.8492010.425408.97180HepG2ASCC1
KIF13BENSG00000197892.8921.75850612.874900.588704.526803.40170HepG2BCLAF1
KIF13BENSG00000197892.81315.084601013.743100.375405.356404.37060HepG2DAZAP1
KIF13BENSG00000197892.8704.37570525.359600.422902.798201.39890HepG2DDX28
KIF13BENSG00000197892.82300.238201469.647200.646207.196406.23240HepG2DDX3X
KIF13BENSG00000197892.8854.18840659.385900.373302.710101.73500HepG2DHX30
KIF13BENSG00000197892.8903.42720683.667300.402004.052203.21380HepG2DNAJC21
KIF13BENSG00000197892.8515.09850746.99390-0.536204.129002.77140HepG2EFTUD2
KIF13BENSG00000197892.82023.328501341.038600.593305.388504.49830HepG2EIF4A3
KIF13BENSG00000197892.81628.775801866.45650-0.196501.986601.45860HepG2ETF1
KIF13BENSG00000197892.81041.69250656.538300.665902.432201.48510HepG2FTO
KIF13BENSG00000197892.81088.83110870.531100.322702.254401.53820HepG2FUBP3
KIF13BENSG00000197892.8698.07280975.08920-0.482202.692701.59120HepG2FUS
KIF13BENSG00000197892.81102.41780919.034700.262402.283501.62760HepG2HNRNPF
KIF13BENSG00000197892.8726.16660923.46120-0.346803.227402.50420HepG2HNRNPL
KIF13BENSG00000197892.81326.24570708.774500.903806.277405.37320HepG2HNRNPLL
KIF13BENSG00000197892.8676.71930839.59190-0.311102.172101.33010HepG2HNRNPM
KIF13BENSG00000197892.81122.38040904.982400.310502.442401.76030HepG2IGF2BP1
KIF13BENSG00000197892.8994.864801412.37610-0.505603.284001.91870HepG2KRR1
KIF13BENSG00000197892.8902.256401437.47020-0.671905.611604.41510HepG2LARP4
KIF13BENSG00000197892.8592.50320763.96530-0.366702.450701.38810HepG2LARP7
KIF13BENSG00000197892.81711.259401353.995800.337702.263901.66810HepG2MAGOH
KIF13BENSG00000197892.8502.56220761.28420-0.599102.725601.68160HepG2METAP2
KIF13BENSG00000197892.81639.704801240.723100.402202.961602.21720HepG2PABPC4
KIF13BENSG00000197892.8999.69230680.224200.555407.451706.28470HepG2PPIL4
KIF13BENSG00000197892.81323.663901017.858800.378903.698502.92850HepG2PUM2
KIF13BENSG00000197892.81585.071901149.400600.463608.452407.47600HepG2PUS1
KIF13BENSG00000197892.8455.18560890.80000-0.968606.516505.46000HepG2RAVER1
KIF13BENSG00000197892.81122.423401560.00140-0.474906.637205.91780HepG2RBM22
KIF13BENSG00000197892.81498.800901244.184600.268501.932501.36060HepG2RBM25
KIF13BENSG00000197892.8802.539101408.77440-0.811809.208908.32460HepG2NELFE
KIF13BENSG00000197892.8570.51670707.79900-0.311101.890101.37360HepG2RPS19
KIF13BENSG00000197892.8951.33100679.181200.486106.842705.89690HepG2SAFB2
KIF13BENSG00000197892.81150.03890701.461200.713103.474202.69250HepG2SF3B1
KIF13BENSG00000197892.81255.95960920.022600.448907.191706.14440HepG2SLBP
KIF13BENSG00000197892.81115.94740947.397000.236102.007801.46370HepG2SRSF5
KIF13BENSG00000197892.81035.294801529.75190-0.5633011.1599010.26390HepG2SSB
KIF13BENSG00000197892.81326.402901077.472100.299803.519102.83310HepG2SUCLG1
KIF13BENSG00000197892.81036.99270821.671500.335702.565601.65950HepG2SUPT6H
KIF13BENSG00000197892.8686.137101236.64680-0.849909.582408.64080HepG2TAF15
KIF13BENSG00000197892.8626.66080462.718700.437402.446301.50130HepG2TFIP11
KIF13BENSG00000197892.81390.86100992.214200.487203.560102.60540HepG2UBE2L3
KIF13BENSG00000197892.81102.666201345.45870-0.287102.923901.85050HepG2UTP18
KIF13BENSG00000197892.81093.952401263.79130-0.208201.942501.42240HepG2UTP3
KIF13BENSG00000197892.81680.718901439.653900.223302.848102.29570HepG2ZNF622
KIF13BENSG00000197892.8316.17720496.41480-0.650804.446303.73490K562AQR
KIF13BENSG00000197892.8359.01020244.308800.555203.594802.49370K562BCLAF1
KIF13BENSG00000197892.8336.35950190.560200.819704.831003.66690K562BOP1
KIF13BENSG00000197892.8297.33480202.605000.553302.912102.10870K562CPSF6
KIF13BENSG00000197892.8847.07950547.682800.629108.872707.78840K562DDX47
KIF13BENSG00000197892.8657.68320334.438000.9756014.9278013.45920K562EIF2S2
KIF13BENSG00000197892.8375.26900206.175000.864006.390905.07070K562FMR1
KIF13BENSG00000197892.8275.77190174.764600.658003.104602.13060K562FTO
KIF13BENSG00000197892.8294.78700445.66340-0.596303.895303.00280K562GRSF1
KIF13BENSG00000197892.8428.10180280.442600.610104.184903.46620K562HNRNPC
KIF13BENSG00000197892.8322.94560494.98100-0.616104.974703.51440K562HNRNPL
KIF13BENSG00000197892.8150.12470253.98830-0.758603.651402.56880K562HNRNPM
KIF13BENSG00000197892.8536.04230390.060200.458602.430801.48740K562IGF2BP2
KIF13BENSG00000197892.8528.59460396.740700.413902.681901.51430K562IGF2BP3
KIF13BENSG00000197892.8303.09690188.810300.682703.969602.90830K562METAP2
KIF13BENSG00000197892.8549.89290393.305000.483403.543702.13890K562NCBP2
KIF13BENSG00000197892.8537.59380758.63200-0.496902.573701.78730K562PUF60
KIF13BENSG00000197892.8510.03500712.44480-0.482204.328703.60360K562RBM15
KIF13BENSG00000197892.8507.76330372.275100.447702.636501.30880K562RBM34
KIF13BENSG00000197892.8286.18880401.88110-0.489802.840401.73200K562NELFE
KIF13BENSG00000197892.8410.23460240.357900.771204.584103.53000K562RPS19
KIF13BENSG00000197892.8323.55920183.998800.814204.636803.35870K562SF3B1
KIF13BENSG00000197892.8551.73480390.441300.498803.703302.89060K562SRSF1
KIF13BENSG00000197892.8520.46510381.167400.449303.065802.19610K562TIA1
KIF13BENSG00000197892.8511.85290374.043300.452402.815301.70880K562TRA2A
KIF13BENSG00000197892.8516.83350290.657000.830305.189303.59450K562U2AF1
KIF13BENSG00000197892.8596.40190405.811800.555403.435402.09090K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KIF13B is not available on ENCORE database.





4 RBPs can affect the splicing of KIF13B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEKIF13BENSG00000197892.8chr8-289327972893286028929136289298332895026128950395-0.397000.000250.02706excludedHepG2DDX6
SEKIF13BENSG00000197892.8chr8-2898609228986191289846382898478528988049289881820.257000.000010.00233includedHepG2HNRNPL
MXEKIF13BENSG00000197892.8chr8-2893279728932860289502612895039528929136289298332895664928956758-0.190000.004480.096562includedHepG2HNRNPU
MXEKIF13BENSG00000197892.8chr8-2893279728932860289502612895039528929136289298332895664928956758-0.302000.000040.003552includedHepG2TIAL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for KIF13B is not avaliable on ENCORE database.